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Biochem.", "date": "2018", "authors": "Kozono Takuma, Tadahira Kazuko, Okumura Wataru, Itai Nao, Tamura-Nakano Miwa, Dohi Taeko, Tonozuka Takashi, Nishikawa Atsushi", "reference": { "type": "PubMed", "id": "29878215", "url": "https://pubmed.ncbi.nlm.nih.gov/29878215" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BJS4-1", "protein_name": "SUN domain-containing protein 2", "gene_name": "Sun2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D666-1", "protein_name": "SUN domain-containing protein 1", "gene_name": "Sun1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q60664-1", "protein_name": "Inositol 1,4,5-triphosphate receptor associated 2", "gene_name": "Irag2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BJS4", "url": "https://www.uniprot.org/uniprotkb/Q8BJS4" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" 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gene associated with cerebral cavernous malformations (CCM1).", "journal": "Acta neuropathologica", "date": "2002", "authors": "Kehrer-Sawatzki H, Wilda M, Braun VM, Richter HP, Hameister H", "reference": { "type": "PubMed", "id": "12172908", "url": "https://pubmed.ncbi.nlm.nih.gov/12172908" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A2ALS5-1", "protein_name": "Rap1 GTPase-activating protein 1", "gene_name": "Rap1gap", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6S5J6-1", "protein_name": "Krev interaction trapped protein 1", "gene_name": "Krit1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O00522-1", "protein_name": "Krev interaction trapped protein 1", "gene_name": "KRIT1", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "A2ALS5", "url": "https://www.uniprot.org/uniprotkb/A2ALS5" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus 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Muzzio IA, Bourtchouladze R, Van-Strien N, Lapidus K, Yin D, Winder DG, Adams JP, Sweatt JD, Kandel ER", "reference": { "type": "PubMed", "id": "12873387", "url": "https://pubmed.ncbi.nlm.nih.gov/12873387" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A2ALS5-1", "protein_name": "Rap1 GTPase-activating protein 1", "gene_name": "Rap1gap", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "A2ALS5", "url": "https://www.uniprot.org/uniprotkb/A2ALS5" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.12873387", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Expression of the guanine nucleotide exchange factor, mr-gef, is regulated during the differentiation of specific subsets of telencephalic neurons.", "journal": "Brain research. Developmental brain research", "date": "2003", "authors": "Bithell A, Alberta J, Hornby F, Stiles CD, Williams BP", "reference": { "type": "PubMed", "id": "14643017", "url": "https://pubmed.ncbi.nlm.nih.gov/14643017" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A2ALS5-1", "protein_name": "Rap1 GTPase-activating protein 1", "gene_name": "Rap1gap", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P83900-1", "protein_name": "Rap guanine nucleotide exchange factor 5", "gene_name": "Rapgef5", "tax_name": "Rat" }, { "uniprot_canonical_ac": "E9PT59-1", "protein_name": "Rho guanine nucleotide exchange factor 5", "gene_name": "Arhgef5", "tax_name": "Rat" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "A2ALS5", "url": "https://www.uniprot.org/uniprotkb/A2ALS5" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.14643017", 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Stoykova A, Chowdhury K, Gruss P", "reference": { "type": "PubMed", "id": "11336498", "url": "https://pubmed.ncbi.nlm.nih.gov/11336498" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q91WM1-1", "protein_name": "Spermatid perinuclear RNA-binding protein", "gene_name": "Strbp", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q91WM1", "url": "https://www.uniprot.org/uniprotkb/Q91WM1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.11336498", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain.", "journal": "BMC Dev. Biol.", "date": "2005", "authors": "McKee AE, Minet E, Stern C, Riahi S, Stiles CD, Silver PA", "reference": { "type": "PubMed", "id": "16033648", "url": "https://pubmed.ncbi.nlm.nih.gov/16033648" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q91WM1-1", "protein_name": "Spermatid perinuclear RNA-binding protein", "gene_name": "Strbp", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q91WM1", "url": "https://www.uniprot.org/uniprotkb/Q91WM1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.16033648", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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mouse, rat, human, and medaka fish.", "journal": "Biology of reproduction", "date": "2008", "authors": "Ito M, Shikano T, Oda S, Horiguchi T, Tanimoto S, Awaji T, Mitani H, Miyazaki S", "reference": { "type": "PubMed", "id": "18322275", "url": "https://pubmed.ncbi.nlm.nih.gov/18322275" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8K4D7-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase zeta-1", "gene_name": "Plcz1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q5FX52-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase zeta-1", "gene_name": "Plcz1", "tax_name": "Rat" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8K4D7", "url": "https://www.uniprot.org/uniprotkb/Q8K4D7" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.18322275", "abstract": "", 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M, Abu-Dawas R, AlMohanna F, Nomikos M, Jones C, Abu-Dawud R, Al-Yacoub N, Coward K, Lai FA, Assiri AM", "reference": { "type": "PubMed", "id": "33208563", "url": "https://pubmed.ncbi.nlm.nih.gov/33208563" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8K4D7-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase zeta-1", "gene_name": "Plcz1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8K4D7", "url": "https://www.uniprot.org/uniprotkb/Q8K4D7" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.33208563", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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"date": "2011-02", "authors": "Yadav Manisha C, Sim\u00e3o Ana Maria Sper, Narisawa Sonoko, Huesa Carmen, McKee Marc D, Farquharson Colin, Mill\u00e1n Jos\u00e9 Luis", "reference": { "type": "PubMed", "id": "20684022", "url": "https://pubmed.ncbi.nlm.nih.gov/20684022" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P09242-1", "protein_name": "Alkaline phosphatase, tissue-nonspecific isozyme", "gene_name": "Alpl", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2H9-1", "protein_name": "Phosphoethanolamine/phosphocholine phosphatase", "gene_name": "Phospho1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P09242", "url": "https://www.uniprot.org/uniprotkb/P09242" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.20684022", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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Lett.", "date": "2018", "authors": "Pinkerton Anthony B, Sergienko Eduard, Bravo Yalda, Dahl Russell, Ma Chen-Ting, Sun Qing, Jackson Michael R, Cosford Nicholas D P, Mill\u00e1n Jos\u00e9 Luis", "reference": { "type": "PubMed", "id": "29174347", "url": "https://pubmed.ncbi.nlm.nih.gov/29174347" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P09242-1", "protein_name": "Alkaline phosphatase, tissue-nonspecific isozyme", "gene_name": "Alpl", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P09242", "url": "https://www.uniprot.org/uniprotkb/P09242" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.29174347", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", 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induction: HYPB/Setd2 mediates all H3K36 trimethylation.", "journal": "The EMBO journal", "date": "2008", "authors": "Edmunds JW, Mahadevan LC, Clayton AL", "reference": { "type": "PubMed", "id": "18157086", "url": "https://pubmed.ncbi.nlm.nih.gov/18157086" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "E9Q5F9-1", "protein_name": "Histone-lysine N-methyltransferase SETD2", "gene_name": "Setd2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "E9Q5F9", "url": "https://www.uniprot.org/uniprotkb/E9Q5F9" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.18157086", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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[] } ] }, { "title": "SET domain containing 2 promotes megakaryocyte polyploidization and platelet generation through methylation of \u03b1-tubulin.", "journal": "Journal of thrombosis and haemostasis : JTH", "date": "2024-06", "authors": "Chen Lei, Liu Jingkun, Chen Kunying, Su Yanxun, Chen Yihe, Lei Ying, Si Jia, Zhang Jie, Zhang Zhaojun, Zou Weiguo, Zhang Xiaohui, Rondina Matthew T, Wang Qian-Fei, Li Yueying", "reference": { "type": "PubMed", "id": "38537781", "url": "https://pubmed.ncbi.nlm.nih.gov/38537781" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "E9Q5F9-1", "protein_name": "Histone-lysine N-methyltransferase SETD2", "gene_name": "Setd2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "E9Q5F9", "url": "https://www.uniprot.org/uniprotkb/E9Q5F9" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Catalytic activity of Setd2 is essential for embryonic development in mice: establishment of a mouse model harboring patient-derived Setd2 mutation.", "journal": "Frontiers of medicine", "date": "2024-10", "authors": "Chen Shubei, 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Endocrinol.", "date": "2000", "authors": "Kotaja N, Aittomaki S, Silvennoinen O, Palvimo JJ, Janne OA", "reference": { "type": "PubMed", "id": "11117529", "url": "https://pubmed.ncbi.nlm.nih.gov/11117529" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O88907-1", "protein_name": "E3 SUMO-protein ligase PIAS1", "gene_name": "Pias1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O54714-1", "protein_name": "E3 SUMO-protein ligase PIAS3", "gene_name": "Pias3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6AZ28-1", "protein_name": "E3 SUMO-protein ligase PIAS2", "gene_name": "Pias2", "tax_name": "Rat" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O88907", "url": "https://www.uniprot.org/uniprotkb/O88907" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.11117529", "abstract": "", "glycosylation": [], "mutagenesis": 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Biol.", "date": "2007", "authors": "Park SW, Hu X, Gupta P, Lin YP, Ha SG, Wei LN", "reference": { "type": "PubMed", "id": "17187077", "url": "https://pubmed.ncbi.nlm.nih.gov/17187077" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O88907-1", "protein_name": "E3 SUMO-protein ligase PIAS1", "gene_name": "Pias1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CBD1-1", "protein_name": "Nuclear receptor-interacting protein 1", "gene_name": "Nrip1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P63280-1", "protein_name": "SUMO-conjugating enzyme UBC9", "gene_name": "Ube2i", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q505F1-1", "protein_name": "Nuclear receptor subfamily 2 group C member 1", "gene_name": "Nr2c1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JHD1-1", "protein_name": "Histone acetyltransferase KAT2B", "gene_name": "Kat2b", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O88907", "url": "https://www.uniprot.org/uniprotkb/O88907" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 167, "end_pos": 167, "sequence_org": "K", "sequence_mut": "A", "comment": "No effect on sumoylation.", "evidence": [ { "database": "UniProtKB", "id": "Q505F1", "url": "https://www.uniprot.org/uniprotkb/Q505F1" }, { "database": "PubMed", "id": "17187077", "url": "https://pubmed.ncbi.nlm.nih.gov/17187077" } ], "uniprot_canonical_ac": "Q505F1-1" }, { "start_pos": 238, "end_pos": 238, "sequence_org": "K", "sequence_mut": "A", "comment": "Abolishes sumoylation. 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[] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Sumoylation of EKLF promotes transcriptional repression and is involved in inhibition of 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"sequence_org": "C", "sequence_mut": "G", "comment": "Loss of promotion of EKLF sumoylation; when associated with G-351 and A-356.", "evidence": [ { "database": "UniProtKB", "id": "O88907", "url": "https://www.uniprot.org/uniprotkb/O88907" }, { "database": "PubMed", "id": "17938210", "url": "https://pubmed.ncbi.nlm.nih.gov/17938210" } ], "uniprot_canonical_ac": "O88907-1" }, { "start_pos": 351, "end_pos": 351, "sequence_org": "C", "sequence_mut": "G", "comment": "Loss of promotion of EKLF sumoylation; when associated with G-346 and A-356.", "evidence": [ { "database": "UniProtKB", "id": "O88907", "url": "https://www.uniprot.org/uniprotkb/O88907" }, { "database": "PubMed", "id": "17938210", "url": "https://pubmed.ncbi.nlm.nih.gov/17938210" } ], "uniprot_canonical_ac": "O88907-1" }, { "start_pos": 356, "end_pos": 356, "sequence_org": "C", "sequence_mut": "A", "comment": "Loss of promotion of EKLF sumoylation; when associated with G-346 and G-351.", "evidence": [ { "database": "UniProtKB", "id": "O88907", "url": "https://www.uniprot.org/uniprotkb/O88907" }, { "database": "PubMed", "id": "17938210", "url": "https://pubmed.ncbi.nlm.nih.gov/17938210" } ], "uniprot_canonical_ac": "O88907-1" }, { "start_pos": 363, "end_pos": 363, "sequence_org": "I", "sequence_mut": "S", "comment": "Loss of promotion of EKLF sumoylation.", "evidence": [ { "database": "UniProtKB", "id": "O88907", "url": "https://www.uniprot.org/uniprotkb/O88907" }, { "database": "PubMed", "id": "17938210", "url": "https://pubmed.ncbi.nlm.nih.gov/17938210" } ], "uniprot_canonical_ac": "O88907-1" }, { "start_pos": 375, "end_pos": 376, "sequence_org": "PV", "sequence_mut": "AA", "comment": "Loss of promotion of EKLF sumoylation.", "evidence": [ { "database": "UniProtKB", "id": "O88907", "url": "https://www.uniprot.org/uniprotkb/O88907" }, { "database": "PubMed", "id": "17938210", "url": "https://pubmed.ncbi.nlm.nih.gov/17938210" } ], "uniprot_canonical_ac": "O88907-1" }, { "start_pos": 56, "end_pos": 56, "sequence_org": "K", "sequence_mut": "R", "comment": "Abolishes sumoylation. No change in nuclear localization but no colocalization with SUMO1. Reduces inhibition of megakaryocytic differentiation. No decrease in bone marrow precursors to form megakaryocytic colonies. No effect on erythroid differentiation.", "evidence": [ { "database": "UniProtKB", "id": "P46099", "url": "https://www.uniprot.org/uniprotkb/P46099" }, { "database": "PubMed", "id": "17938210", "url": "https://pubmed.ncbi.nlm.nih.gov/17938210" } ], "uniprot_canonical_ac": "P46099-1" } ], "record_id": "pubmed.17938210", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Protein inhibitor of activated STAT 1 (PIAS1) is identified as the SUMO E3 ligase of CCAAT/enhancer-binding protein beta (C/EBPbeta) during adipogenesis.", "journal": "Molecular and cellular biology", "date": "2013", "authors": "Liu Y, Zhang YD, Guo L, Huang HY, Zhu H, Huang JX, Liu Y, Zhou SR, Dang YJ, Li X, Tang QQ", "reference": { "type": "PubMed", "id": "24061474", "url": "https://pubmed.ncbi.nlm.nih.gov/24061474" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O88907-1", "protein_name": "E3 SUMO-protein ligase PIAS1", "gene_name": "Pias1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P28033-1", "protein_name": "CCAAT/enhancer-binding protein beta", "gene_name": "Cebpb", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O88907", "url": "https://www.uniprot.org/uniprotkb/O88907" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 133, "end_pos": 133, "sequence_org": "K", "sequence_mut": "R", "comment": "Not sumoylated. Decreases ubiquitination and increases stability. Loss of proliferation inhibition in T cells. No effect on transactivation activity.", "evidence": [ { "database": "UniProtKB", "id": "P28033", "url": "https://www.uniprot.org/uniprotkb/P28033" }, { "database": "PubMed", "id": "16585579", "url": "https://pubmed.ncbi.nlm.nih.gov/16585579" }, { "database": "PubMed", "id": "24061474", "url": "https://pubmed.ncbi.nlm.nih.gov/24061474" }, { "database": "PubMed", "id": "20194620", "url": "https://pubmed.ncbi.nlm.nih.gov/20194620" } ], "uniprot_canonical_ac": "P28033-1" } ], "record_id": "pubmed.24061474", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"database": "UniProtKB", "id": "O88907", "url": "https://www.uniprot.org/uniprotkb/O88907" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.34187905", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PIAS1-mediated SUMOylation of influenza A virus PB2 restricts viral replication and virulence.", "journal": "PLoS pathogens", "date": "2022", "authors": "Wang G, Zhao Y, Zhou Y, Jiang L, Liang L, Kong F, Yan Y, Wang X, Wang Y, Wen X, Zeng X, Tian G, Deng G, Shi J, Liu L, Chen H, Li C", "reference": { "type": "PubMed", "id": "35377920", "url": "https://pubmed.ncbi.nlm.nih.gov/35377920" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O88907-1", "protein_name": "E3 SUMO-protein ligase PIAS1", "gene_name": "Pias1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O88907", "url": "https://www.uniprot.org/uniprotkb/O88907" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.35377920", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SUMOylation and coupling of eNOS mediated by PIAS1 contribute to maintenance of vascular homeostasis.", "journal": "FASEB journal : official publication of the Federation of American Societies for Experimental Biology", "date": "2024-01", "authors": "Wang Li, Zeng Wenjing, Wang Chaowen, Lu Yanli, Xiong Xiaowei, Chen Sheng, Huang Qianqian, Yan Feixing, Huang Qiren", "reference": { "type": "PubMed", "id": "38102979", "url": "https://pubmed.ncbi.nlm.nih.gov/38102979" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O88907-1", "protein_name": "E3 SUMO-protein ligase PIAS1", "gene_name": "Pias1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O75925-1", "protein_name": "E3 SUMO-protein ligase PIAS1", "gene_name": "PIAS1", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O88907", "url": "https://www.uniprot.org/uniprotkb/O88907" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.38102979", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] 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