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Lett.", "date": "2008", "authors": "van Heusden G Paul H, Steensma H Yde", "reference": { "type": "PubMed", "id": "18336552", "url": "https://pubmed.ncbi.nlm.nih.gov/18336552" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38838-1", "protein_name": "DNA-dependent metalloprotease WSS1", "gene_name": "WSS1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38838", "url": "https://www.uniprot.org/uniprotkb/P38838" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.18336552", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Pex18p is constitutively degraded during peroxisome biogenesis.", "journal": "The Journal of biological chemistry", "date": "2001-12-14", "authors": "Purdue P E, Lazarow P B", "reference": { "type": "PubMed", "id": "11590152", "url": "https://pubmed.ncbi.nlm.nih.gov/11590152" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38855-1", "protein_name": "Peroxisomal membrane protein PEX18", "gene_name": "PEX18", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38855", "url": "https://www.uniprot.org/uniprotkb/P38855" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.11590152", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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[] } ] }, { "title": "Mechanistic insight into the nucleus-vacuole junction based on the Vac8p-Nvj1p crystal structure.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2017-06-06", "authors": "Jeong Hanbin, Park Jumi, Kim Hye-In, Lee Miriam, Ko Young-Joon, Lee Sanghwa, Jun Youngsoo, Lee Changwook", "reference": { "type": "PubMed", "id": "28533415", "url": "https://pubmed.ncbi.nlm.nih.gov/28533415" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38881-1", "protein_name": "Nucleus-vacuole junction protein 1", "gene_name": "NVJ1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P39968-1", "protein_name": "Vacuolar protein 8", "gene_name": "VAC8", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38881", "url": "https://www.uniprot.org/uniprotkb/P38881" } ], "common_name": "Baker's 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(Mosk.)", "date": "1993", "authors": "Kuprina N Iu, Krol' E S, Koriabin M Iu, Bannikov V M, Kirillov A V, Zakhar'ev V M, Larionov V L", "reference": { "type": "PubMed", "id": "8316241", "url": "https://pubmed.ncbi.nlm.nih.gov/8316241" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38907-1", "protein_name": "Inner kinetochore subunit CHL4", "gene_name": "CHL4", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38907", "url": "https://www.uniprot.org/uniprotkb/P38907" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.8316241", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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Natl. Acad. Sci. U.S.A.", "date": "1993", "authors": "Rospert S, Glick B S, Jen\u00f6 P, Schatz G, Todd M J, Lorimer G H, Viitanen P V", "reference": { "type": "PubMed", "id": "7902576", "url": "https://pubmed.ncbi.nlm.nih.gov/7902576" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38910-1", "protein_name": "10 kDa heat shock protein, mitochondrial", "gene_name": "HSP10", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38910", "url": "https://www.uniprot.org/uniprotkb/P38910" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.7902576", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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TREX complex.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2004-02-17", "authors": "Hurt Ed, Luo Ming-Juan, R\u00f6ther Susanne, Reed Robin, Str\u00e4sser Katja", "reference": { "type": "PubMed", "id": "14769921", "url": "https://pubmed.ncbi.nlm.nih.gov/14769921" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38922-1", "protein_name": "Serine/arginine (SR)-type shuttling mRNA binding protein HRB1", "gene_name": "HRB1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P25555-1", "protein_name": "Serine/arginine (SR)-type shuttling mRNA binding protein GBP2", "gene_name": "GBP2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38922", "url": "https://www.uniprot.org/uniprotkb/P38922" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces 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Haijia, Schneider Ulla-Maria, Meyer Katja, Jung Klaus, Krebber Heike", "reference": { "type": "PubMed", "id": "24452287", "url": "https://pubmed.ncbi.nlm.nih.gov/24452287" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38922-1", "protein_name": "Serine/arginine (SR)-type shuttling mRNA binding protein HRB1", "gene_name": "HRB1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P25555-1", "protein_name": "Serine/arginine (SR)-type shuttling mRNA binding protein GBP2", "gene_name": "GBP2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38922", "url": "https://www.uniprot.org/uniprotkb/P38922" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.24452287", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": 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"journal": "RNA (New York, N.Y.)", "date": "2000-06", "authors": "Bousquet-Antonelli C, Vanrobays E, G\u00e9lugne J P, Caizergues-Ferrer M, Henry Y", "reference": { "type": "PubMed", "id": "10864042", "url": "https://pubmed.ncbi.nlm.nih.gov/10864042" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38961-1", "protein_name": "25S rRNA (adenine(645)-N(1))-methyltransferase", "gene_name": "RRP8", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38961", "url": "https://www.uniprot.org/uniprotkb/P38961" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "mutagenesis": [ { "start_pos": 390, "end_pos": 390, "sequence_org": "K", "sequence_mut": "E", "comment": "In RRP8-1; no effect. 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"The Journal of biological chemistry", "date": "1998-05-01", "authors": "Grilley M M, Stock S D, Dickson R C, Lester R L, Takemoto J Y", "reference": { "type": "PubMed", "id": "9556590", "url": "https://pubmed.ncbi.nlm.nih.gov/9556590" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38992-1", "protein_name": "Sphingolipid C4-hydroxylase SUR2", "gene_name": "SUR2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38992", "url": "https://www.uniprot.org/uniprotkb/P38992" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.9556590", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Spectroscopy and reactivity of the type 1 copper site in Fet3p from Saccharomyces cerevisiae: correlation of structure with reactivity in the multicopper oxidases.", "journal": "J. Am. Chem. Soc.", "date": "2001", "authors": "Machonkin T E, Quintanar L, Palmer A E, Hassett R, Severance S, Kosman D J, Solomon E I", "reference": { "type": "PubMed", "id": "11389633", "url": "https://pubmed.ncbi.nlm.nih.gov/11389633" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38993-1", "protein_name": "Iron transport multicopper oxidase FET3", "gene_name": "FET3", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38993", "url": "https://www.uniprot.org/uniprotkb/P38993" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.11389633", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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