[
{
"title": "Effects on specific promoter DNA methylation in zebrafish embryos and larvae following benzo[a]pyrene exposure.",
"journal": "Comp. Biochem. Physiol. C Toxicol. Pharmacol.",
"date": "2014",
"authors": "Corrales J, Fang X, Thornton C, Mei W, Barbazuk W B, Duke M, Scheffler B E, Willett K L",
"reference": {
"type": "PubMed",
"id": "24576477",
"url": "https://pubmed.ncbi.nlm.nih.gov/24576477"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M3B2S9-1",
"protein_name": "DNA mismatch repair protein MSH3",
"gene_name": "msh3",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M3B525-1",
"protein_name": "Lys-63-specific deubiquitinase",
"gene_name": "brcc3",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB13AAI6-1",
"protein_name": "DNA mismatch repair protein MLH1",
"gene_name": "mlh1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M3B2S9",
"url": "https://www.uniprot.org/uniprotkb/A0A8M3B2S9"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.24576477",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "A long noncoding RNA cluster-based genomic locus maintains proper development and visual function.",
"journal": "Nucleic Acids Res.",
"date": "2019",
"authors": "Wang Fei, Ren Dalong, Liang Xiaolin, Ke Shengwei, Zhang Bowen, Hu Bing, Song Xiaoyuan, Wang Xiangting",
"reference": {
"type": "PubMed",
"id": "31127312",
"url": "https://pubmed.ncbi.nlm.nih.gov/31127312"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M3B237-1",
"protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1",
"gene_name": "gapvd1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1NIX6-1",
"protein_name": "Multivesicular body subunit 12Bb",
"gene_name": "mvb12bb",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M3B237",
"url": "https://www.uniprot.org/uniprotkb/A0A8M3B237"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.31127312",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Identification, tissue distribution and developmental expression of tjp1/zo-1, tjp2/zo-2 and tjp3/zo-3 in the zebrafish, Danio rerio.",
"journal": "Gene Expr. Patterns",
"date": "2007",
"authors": "Kiener Tanja K, Sleptsova-Friedrich Inna, Hunziker Walter",
"reference": {
"type": "PubMed",
"id": "17632043",
"url": "https://pubmed.ncbi.nlm.nih.gov/17632043"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M3B637-1",
"protein_name": "Tight junction protein ZO-2a isoform X1",
"gene_name": "tjp2a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB32U188-1",
"protein_name": "Tight junction protein ZO-2b isoform X1",
"gene_name": "tjp2b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M2BHQ8-1",
"protein_name": "Tight junction protein ZO-3",
"gene_name": "tjp3",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M3B637",
"url": "https://www.uniprot.org/uniprotkb/A0A8M3B637"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.17632043",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Temporal and spatial expression of tight junction genes during zebrafish pronephros development.",
"journal": "Gene Expr. Patterns",
"date": "2014",
"authors": "McKee Robert, Gerlach Gary F, Jou Jonathan, Cheng Christina N, Wingert Rebecca A",
"reference": {
"type": "PubMed",
"id": "25460834",
"url": "https://pubmed.ncbi.nlm.nih.gov/25460834"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M3B637-1",
"protein_name": "Tight junction protein ZO-2a isoform X1",
"gene_name": "tjp2a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB32U188-1",
"protein_name": "Tight junction protein ZO-2b isoform X1",
"gene_name": "tjp2b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M2BHQ8-1",
"protein_name": "Tight junction protein ZO-3",
"gene_name": "tjp3",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M2BHN3-1",
"protein_name": "Claudin-2",
"gene_name": "cldn2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M3B637",
"url": "https://www.uniprot.org/uniprotkb/A0A8M3B637"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.25460834",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 4
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Rapid reverse genetic screening using CRISPR in zebrafish.",
"journal": "Nat. Methods",
"date": "2015",
"authors": "Shah Arish N, Davey Crystal F, Whitebirch Alex C, Miller Adam C, Moens Cecilia B",
"reference": {
"type": "PubMed",
"id": "25867848",
"url": "https://pubmed.ncbi.nlm.nih.gov/25867848"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M3B637-1",
"protein_name": "Tight junction protein ZO-2a isoform X1",
"gene_name": "tjp2a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A1XQX2-1",
"protein_name": "Neurexin-1b",
"gene_name": "nrxn1b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A1XQX8-1",
"protein_name": "Neurexin-3a",
"gene_name": "nrxn3a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB32U188-1",
"protein_name": "Tight junction protein ZO-2b isoform X1",
"gene_name": "tjp2b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M2BHQ8-1",
"protein_name": "Tight junction protein ZO-3",
"gene_name": "tjp3",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M3B637",
"url": "https://www.uniprot.org/uniprotkb/A0A8M3B637"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.25867848",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 5
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "An Ectoderm-Derived Myeloid-like Cell Population Functions as Antigen Transporters for Langerhans Cells in Zebrafish Epidermis.",
"journal": "Dev. Cell",
"date": "2019",
"authors": "Lin Xi, Zhou Qiuxia, Zhao Changlong, Lin Guanzhen, Xu Jin, Wen Zilong",
"reference": {
"type": "PubMed",
"id": "31006648",
"url": "https://pubmed.ncbi.nlm.nih.gov/31006648"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M3B637-1",
"protein_name": "Tight junction protein ZO-2a isoform X1",
"gene_name": "tjp2a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N299-1",
"protein_name": "Complement C1q subcomponent subunit C precursor",
"gene_name": "c1qc",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB13A953-1",
"protein_name": "Lysosome membrane protein 2c",
"gene_name": "scarb2c",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB13AB58-1",
"protein_name": "Macrophage mannose receptor 1b precursor",
"gene_name": "mrc1b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1NEQ7-1",
"protein_name": "CD83 antigen precursor",
"gene_name": "cd83",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1P2Q4-1",
"protein_name": "P2Y purinoceptor 11",
"gene_name": "p2ry11",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A2BFD8-1",
"protein_name": "3.1.26.4; Thy-1 membrane glycoprotein precursor",
"gene_name": "thy1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB32U188-1",
"protein_name": "Tight junction protein ZO-2b isoform X1",
"gene_name": "tjp2b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M2BHQ8-1",
"protein_name": "Tight junction protein ZO-3",
"gene_name": "tjp3",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M2BFR1-1",
"protein_name": "Chemokine (C-C motif) receptor 12a",
"gene_name": "ccr12a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M3B637",
"url": "https://www.uniprot.org/uniprotkb/A0A8M3B637"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.31006648",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 10
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Blood Flow Suppresses Vascular Anomalies in a Zebrafish Model of Cerebral Cavernous Malformations.",
"journal": "Circ. Res.",
"date": "2019",
"authors": "R\u00f6del Claudia Jasmin, Otten C\u00e9cile, Donat Stefan, Louren\u00e7o Marta, Fischer Dorothea, Kuropka Benno, Paolini Alessio, Freund Christian, Abdelilah-Seyfried Salim",
"reference": {
"type": "PubMed",
"id": "31495257",
"url": "https://pubmed.ncbi.nlm.nih.gov/31495257"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M3B637-1",
"protein_name": "Tight junction protein ZO-2a isoform X1",
"gene_name": "tjp2a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB32U188-1",
"protein_name": "Tight junction protein ZO-2b isoform X1",
"gene_name": "tjp2b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M2BHQ8-1",
"protein_name": "Tight junction protein ZO-3",
"gene_name": "tjp3",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M3B637",
"url": "https://www.uniprot.org/uniprotkb/A0A8M3B637"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.31495257",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Mechanosensation of Tight Junctions Depends on ZO-1 Phase Separation and Flow.",
"journal": "Cell",
"date": "2019",
"authors": "Schwayer Cornelia, Shamipour Shayan, Pranjic-Ferscha Kornelija, Schauer Alexandra, Balda Maria, Tada Masazumi, Matter Karl, Heisenberg Carl-Philipp",
"reference": {
"type": "PubMed",
"id": "31675500",
"url": "https://pubmed.ncbi.nlm.nih.gov/31675500"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M3B637-1",
"protein_name": "Tight junction protein ZO-2a isoform X1",
"gene_name": "tjp2a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB32U188-1",
"protein_name": "Tight junction protein ZO-2b isoform X1",
"gene_name": "tjp2b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M2BHQ8-1",
"protein_name": "Tight junction protein ZO-3",
"gene_name": "tjp3",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M3B637",
"url": "https://www.uniprot.org/uniprotkb/A0A8M3B637"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.31675500",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "lazarus is a novel pbx gene that globally mediates hox gene function in zebrafish.",
"journal": "Mol. Cell",
"date": "2000",
"authors": "P\u00f6pperl H, Rikhof H, Chang H, Haffter P, Kimmel C B, Moens C B",
"reference": {
"type": "PubMed",
"id": "10983974",
"url": "https://pubmed.ncbi.nlm.nih.gov/10983974"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M3B506-1",
"protein_name": "Pre-B-cell leukemia transcription factor 3b isoform X1",
"gene_name": "pbx3b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M9QFI5-1",
"protein_name": "Pre-B-cell leukemia transcription factor 1",
"gene_name": "pbx1b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M3B506",
"url": "https://www.uniprot.org/uniprotkb/A0A8M3B506"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.10983974",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Embryonic ionizing radiation exposure results in expression alterations of genes associated with cardiovascular and neurological development, function, and disease and modified cardiovascular function in zebrafish.",
"journal": "Front. Genet.",
"date": "2014",
"authors": "Freeman Jennifer L, Weber Gregory J, Peterson Samuel M, Nie Linda H",
"reference": {
"type": "PubMed",
"id": "25147559",
"url": "https://pubmed.ncbi.nlm.nih.gov/25147559"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M3B506-1",
"protein_name": "Pre-B-cell leukemia transcription factor 3b isoform X1",
"gene_name": "pbx3b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6F0-1",
"protein_name": "Protein lin-7 homolog",
"gene_name": "lin7b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M2B5P8-1",
"protein_name": "Receptor-type tyrosine-protein phosphatase",
"gene_name": "ptpreb",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M3B506",
"url": "https://www.uniprot.org/uniprotkb/A0A8M3B506"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.25147559",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "An atlas of neural crest lineages along the posterior developing zebrafish at single-cell resolution.",
"journal": "Elife",
"date": "2021",
"authors": "Howard Aubrey Ga, Baker Phillip A, Ibarra-Garc\u00eda-Padilla Rodrigo, Moore Joshua A, Rivas Lucia J, Tallman James J, Singleton Eileen W, Westheimer Jessa L, Corteguera Julia A, Uribe Rosa A",
"reference": {
"type": "PubMed",
"id": "33591267",
"url": "https://pubmed.ncbi.nlm.nih.gov/33591267"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M3B506-1",
"protein_name": "Pre-B-cell leukemia transcription factor 3b isoform X1",
"gene_name": "pbx3b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M3B506",
"url": "https://www.uniprot.org/uniprotkb/A0A8M3B506"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.33591267",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "In toto imaging of early enteric nervous system development reveals that gut colonization is tied to proliferation downstream of Ret.",
"journal": "Development",
"date": "2022",
"authors": "Baker Phillip A, Ibarra-Garc\u00eda-Padilla Rodrigo, Venkatesh Akshaya, Singleton Eileen W, Uribe Rosa A",
"reference": {
"type": "PubMed",
"id": "36300492",
"url": "https://pubmed.ncbi.nlm.nih.gov/36300492"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M3B506-1",
"protein_name": "Pre-B-cell leukemia transcription factor 3b isoform X1",
"gene_name": "pbx3b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M3B506",
"url": "https://www.uniprot.org/uniprotkb/A0A8M3B506"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.36300492",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "The 13q and 11q B-cell chronic lymphocytic leukaemia-associated regions derive from a common ancestral region in the zebrafish.",
"journal": "Br. J. Haematol.",
"date": "2007",
"authors": "Auer Rebecca L, Riaz Sophia, Cotter Finbarr E",
"reference": {
"type": "PubMed",
"id": "17488487",
"url": "https://pubmed.ncbi.nlm.nih.gov/17488487"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M3B119-1",
"protein_name": "Tetratricopeptide repeat protein 12 isoform X1",
"gene_name": "ttc12",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M9Q873-1",
"protein_name": "Protein MFI-like",
"gene_name": "gb:co360592",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q8JFT7-1",
"protein_name": "Importin subunit alpha",
"gene_name": "kpna3",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M3B119",
"url": "https://www.uniprot.org/uniprotkb/A0A8M3B119"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.17488487",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Biallelic mutations of TTC12 and TTC21B were identified in Chinese patients with multisystem ciliopathy syndromes.",
"journal": "Hum. Genomics",
"date": "2022",
"authors": "Chen Weicheng, Wang Feifei, Zeng Weijia, Zhang Xinyan, Shen Libing, Zhang Yuan, Zhou Xiangyu",
"reference": {
"type": "PubMed",
"id": "36273201",
"url": "https://pubmed.ncbi.nlm.nih.gov/36273201"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M3B119-1",
"protein_name": "Tetratricopeptide repeat protein 12 isoform X1",
"gene_name": "ttc12",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q9H892-1",
"protein_name": "Tetratricopeptide repeat protein 12",
"gene_name": "TTC12",
"tax_name": "Human"
},
{
"uniprot_canonical_ac": "B0R0W1-1",
"protein_name": "Tetratricopeptide repeat protein 21B",
"gene_name": "ttc21b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q7Z4L5-1",
"protein_name": "Tetratricopeptide repeat protein 21B",
"gene_name": "TTC21B",
"tax_name": "Human"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M3B119",
"url": "https://www.uniprot.org/uniprotkb/A0A8M3B119"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.36273201",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 4
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Observation of miRNA gene expression in zebrafish embryos by in situ hybridization to microRNA primary transcripts.",
"journal": "Zebrafish",
"date": "2011",
"authors": "He Xinjun, Yan Yi-Lin, DeLaurier April, Postlethwait John H",
"reference": {
"type": "PubMed",
"id": "21288128",
"url": "https://pubmed.ncbi.nlm.nih.gov/21288128"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M3B4Q2-1",
"protein_name": "Formin-binding protein 1a isoform X1",
"gene_name": "fnbp1a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M3B4Q2",
"url": "https://www.uniprot.org/uniprotkb/A0A8M3B4Q2"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.21288128",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Loss of Porcupine impairs convergent extension during gastrulation in zebrafish.",
"journal": "J. Cell Sci.",
"date": "2012",
"authors": "Chen Qiuhong, Takada Ritsuko, Takada Shinji",
"reference": {
"type": "PubMed",
"id": "22357957",
"url": "https://pubmed.ncbi.nlm.nih.gov/22357957"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M3B1X0-1",
"protein_name": "Protein-serine O-palmitoleoyltransferase porcupine isoform X1",
"gene_name": "porcn",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M3B1X0",
"url": "https://www.uniprot.org/uniprotkb/A0A8M3B1X0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.22357957",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "The evolution and appearance of C3 duplications in fish originate an exclusive teleost c3 gene form with anti-inflammatory activity.",
"journal": "PLoS ONE",
"date": "2014",
"authors": "Forn-Cun\u00ed Gabriel, Reis Edimara S, Dios Sonia, Posada David, Lambris John D, Figueras Antonio, Novoa Beatriz",
"reference": {
"type": "PubMed",
"id": "24926798",
"url": "https://pubmed.ncbi.nlm.nih.gov/24926798"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M3B5N7-1",
"protein_name": "Complement C3b.1 isoform X1",
"gene_name": "c3b.1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M3AN56-1",
"protein_name": "Complement component c3b, tandem duplicate 2 isoform X1",
"gene_name": "c3b.2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A0R4IMB2-1",
"protein_name": "Complement component c3a, duplicate 6 precursor",
"gene_name": "c3a.6",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M3B5N7",
"url": "https://www.uniprot.org/uniprotkb/A0A8M3B5N7"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.24926798",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Exposure to mercuric chloride induces developmental damage, oxidative stress and immunotoxicity in zebrafish embryos-larvae.",
"journal": "Aquat. Toxicol.",
"date": "2016",
"authors": "Zhang Qun-Fang, Li Ying-Wen, Liu Zhi-Hao, Chen Qi-Liang",
"reference": {
"type": "PubMed",
"id": "27821350",
"url": "https://pubmed.ncbi.nlm.nih.gov/27821350"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M3B5N7-1",
"protein_name": "Complement C3b.1 isoform X1",
"gene_name": "c3b.1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M3B5N7",
"url": "https://www.uniprot.org/uniprotkb/A0A8M3B5N7"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.27821350",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Impact of Lactobacillus casei BL23 on the Host Transcriptome, Growth and Disease Resistance in Larval Zebrafish.",
"journal": "Front. Physiol.",
"date": "2018",
"authors": "Qin Chubin, Xie Yadong, Wang Yibing, Li Shuning, Ran Chao, He Suxu, Zhou Zhigang",
"reference": {
"type": "PubMed",
"id": "30233415",
"url": "https://pubmed.ncbi.nlm.nih.gov/30233415"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M3B5N7-1",
"protein_name": "Complement C3b.1 isoform X1",
"gene_name": "c3b.1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M3AN56-1",
"protein_name": "Complement component c3b, tandem duplicate 2 isoform X1",
"gene_name": "c3b.2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M3B5N7",
"url": "https://www.uniprot.org/uniprotkb/A0A8M3B5N7"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.30233415",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Cell type specific gene expression profiling reveals a role for complement component C3 in neutrophil responses to tissue damage.",
"journal": "Sci. Rep.",
"date": "2020",
"authors": "Houseright Ruth A, Rosowski Emily E, Lam Pui-Ying, Tauzin Sebastien J M, Mulvaney Oscar, Dewey Colin N, Huttenlocher Anna",
"reference": {
"type": "PubMed",
"id": "32973200",
"url": "https://pubmed.ncbi.nlm.nih.gov/32973200"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M3B5N7-1",
"protein_name": "Complement C3b.1 isoform X1",
"gene_name": "c3b.1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M3AN56-1",
"protein_name": "Complement component c3b, tandem duplicate 2 isoform X1",
"gene_name": "c3b.2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A0R4IMB2-1",
"protein_name": "Complement component c3a, duplicate 6 precursor",
"gene_name": "c3a.6",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M3B5N7",
"url": "https://www.uniprot.org/uniprotkb/A0A8M3B5N7"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.32973200",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Cdc42 GTPase and Rac1 GTPase act downstream of p120 catenin and require GTP exchange during gastrulation of zebrafish mesoderm.",
"journal": "Dev. Dyn.",
"date": "2012",
"authors": "Hsu Cynthia L, Muerdter Claire P, Knickerbocker Abhay D, Walsh Ryan M, Zepeda-Rivera Martha A, Depner Kevin H, Sangesland Maya, Cisneros Trinidad B, Kim Ju Youn, Sanchez-Vazquez Patricia, Cherezova Lidia, Regan Rainy D, Bahrami Nadia M, Gray Elizabeth A, Chan Andrew Y, Chen Terry, Rao Milly Y, Hille Merrill B",
"reference": {
"type": "PubMed",
"id": "22911626",
"url": "https://pubmed.ncbi.nlm.nih.gov/22911626"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M3B2J5-1",
"protein_name": "ARVCF delta catenin family member b isoform X1",
"gene_name": "arvcfb",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB13A7D4-1",
"protein_name": "Catenin delta-2b isoform 1",
"gene_name": "ctnnd2b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M3B2J5",
"url": "https://www.uniprot.org/uniprotkb/A0A8M3B2J5"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.22911626",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Talin1 is required for cardiac Z-disk stabilization and endothelial integrity in zebrafish.",
"journal": "FASEB J.",
"date": "2015",
"authors": "Wu Qing, Zhang Jiaojiao, Koh Wonshill, Yu Qingming, Zhu Xiaojun, Amsterdam Adam, Davis George E, Arnaout M Amin, Xiong Jing-Wei",
"reference": {
"type": "PubMed",
"id": "26310270",
"url": "https://pubmed.ncbi.nlm.nih.gov/26310270"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z7P4-1",
"protein_name": "Talin-2a isoform X1",
"gene_name": "tln2a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z7P4",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z7P4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.26310270",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Focal adhesions are essential to drive zebrafish heart valve morphogenesis.",
"journal": "J. Cell Biol.",
"date": "2019",
"authors": "Gunawan Felix, Gentile Alessandra, Fukuda Ryuichi, Tsedeke Ayele Taddese, Jim\u00e9nez-Amilburu Vanesa, Ramadass Radhan, Iida Atsuo, Sehara-Fujisawa Atsuko, Stainier Didier Y R",
"reference": {
"type": "PubMed",
"id": "30635353",
"url": "https://pubmed.ncbi.nlm.nih.gov/30635353"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z7P4-1",
"protein_name": "Talin-2a isoform X1",
"gene_name": "tln2a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F1Q8T4-1",
"protein_name": "Integrin alpha-9",
"gene_name": "itga9",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z7P4",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z7P4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.30635353",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Rear traction forces drive adherent tissue migration in vivo.",
"journal": "Nat. Cell Biol.",
"date": "2022",
"authors": "Yamaguchi Naoya, Zhang Ziyi, Schneider Teseo, Wang Biran, Panozzo Daniele, Knaut Holger",
"reference": {
"type": "PubMed",
"id": "35165417",
"url": "https://pubmed.ncbi.nlm.nih.gov/35165417"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z7P4-1",
"protein_name": "Talin-2a isoform X1",
"gene_name": "tln2a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q1MSX8-1",
"protein_name": "Integrin beta",
"gene_name": "itgb5",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z7P4",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z7P4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.35165417",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Cofilin regulator 14-3-3zeta is an evolutionarily conserved protein required for phagocytosis and microbial resistance.",
"journal": "J. Leukoc. Biol.",
"date": "2011",
"authors": "Ulvila Johanna, Vanha-aho Leena-Maija, Kleino Anni, V\u00e4h\u00e4-M\u00e4kil\u00e4 Mari, Vuoksio Milka, Eskelinen Sinikka, Hultmark Dan, Kocks Christine, Hallman Mikko, Parikka Mataleena, R\u00e4met Mika",
"reference": {
"type": "PubMed",
"id": "21208897",
"url": "https://pubmed.ncbi.nlm.nih.gov/21208897"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z2K8-1",
"protein_name": "Abl interactor 2a isoform X1",
"gene_name": "abi2a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z2K8",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z2K8"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.21208897",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Sequences and domain structures of mammalian, avian, amphibian and teleost tropoelastins: Clues to the evolutionary history of elastins.",
"journal": "Matrix Biol.",
"date": "2006",
"authors": "Chung Martin I S, Miao Ming, Stahl Richard J, Chan Esther, Parkinson John, Keeley Fred W",
"reference": {
"type": "PubMed",
"id": "16982180",
"url": "https://pubmed.ncbi.nlm.nih.gov/16982180"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z3N0-1",
"protein_name": "Elastin",
"gene_name": "elnb",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8N1TQS2-1",
"protein_name": "Elastin",
"gene_name": "elna",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z3N0",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z3N0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.16982180",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Differential expression of two tropoelastin genes in zebrafish.",
"journal": "Matrix Biol.",
"date": "2007",
"authors": "Miao M, Bruce A E E, Bhanji T, Davis E C, Keeley F W",
"reference": {
"type": "PubMed",
"id": "17112714",
"url": "https://pubmed.ncbi.nlm.nih.gov/17112714"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z3N0-1",
"protein_name": "Elastin",
"gene_name": "elnb",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8N1TQS2-1",
"protein_name": "Elastin",
"gene_name": "elna",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z3N0",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z3N0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.17112714",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Comparative genomics of elastin: Sequence analysis of a highly repetitive protein.",
"journal": "Matrix Biol.",
"date": "2007",
"authors": "He David, Chung Martin, Chan Esther, Alleyne Trevis, Ha Kevin C H, Miao Ming, Stahl Richard J, Keeley Fred W, Parkinson John",
"reference": {
"type": "PubMed",
"id": "17628459",
"url": "https://pubmed.ncbi.nlm.nih.gov/17628459"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z3N0-1",
"protein_name": "Elastin",
"gene_name": "elnb",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8N1TQS2-1",
"protein_name": "Elastin",
"gene_name": "elna",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z3N0",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z3N0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.17628459",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Insulin-like growth factor-2 regulates early neural and cardiovascular system development in zebrafish embryos.",
"journal": "Int. J. Dev. Biol.",
"date": "2010",
"authors": "Hartnett Lori, Glynn Catherine, Nolan Catherine M, Grealy Maura, Byrnes Lucy",
"reference": {
"type": "PubMed",
"id": "19757379",
"url": "https://pubmed.ncbi.nlm.nih.gov/19757379"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z3N0-1",
"protein_name": "Elastin",
"gene_name": "elnb",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z3N0",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z3N0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.19757379",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Latent TGF-beta binding protein 3 identifies a second heart field in zebrafish.",
"journal": "Nature",
"date": "2011",
"authors": "Zhou Yong, Cashman Timothy J, Nevis Kathleen R, Obregon Pablo, Carney Sara A, Liu Yan, Gu Aihua, Mosimann Christian, Sondalle Samuel, Peterson Richard E, Heideman Warren, Burns Caroline E, Burns C Geoffrey",
"reference": {
"type": "PubMed",
"id": "21623370",
"url": "https://pubmed.ncbi.nlm.nih.gov/21623370"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z3N0-1",
"protein_name": "Elastin",
"gene_name": "elnb",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z3N0",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z3N0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.21623370",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Sinus venosus adaptation models prolonged cardiovascular disease and reveals insights into evolutionary transitions of the vertebrate heart.",
"journal": "Nat. Commun.",
"date": "2023",
"authors": "Gafranek Jacob T, D'Aniello Enrico, Ravisankar Padmapriyadarshini, Thakkar Kairavee, Vagnozzi Ronald J, Lim Hee-Woong, Salomonis Nathan, Waxman Joshua S",
"reference": {
"type": "PubMed",
"id": "37679366",
"url": "https://pubmed.ncbi.nlm.nih.gov/37679366"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z3N0-1",
"protein_name": "Elastin",
"gene_name": "elnb",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A2R8QLT6-1",
"protein_name": "Lymphatic vessel endothelial hyaluronic receptor 1b precursor",
"gene_name": "lyve1b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z3N0",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z3N0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.37679366",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Understanding complex dynamics of behavioral, neurochemical and transcriptomic changes induced by prolonged chronic unpredictable stress in zebrafish.",
"journal": "Sci. Rep.",
"date": "2020",
"authors": "Demin Konstantin A, Lakstygal Anton M, Krotova Nataliya A, Masharsky Alexey, Tagawa Natsuki, Chernysh Maria V, Ilyin Nikita P, Taranov Alexander S, Galstyan David S, Derzhavina Ksenia A, Levchenko Nataliia A, Kolesnikova Tatiana O, Mor Mikael S, Vasyutina Marina L, Efimova Evgeniya V, Katolikova Nataliia, Prjibelski Andrey D, Gainetdinov Raul R, de Abreu Murilo S, Amstislavskaya Tamara G, Strekalova Tatyana, Kalueff Allan V",
"reference": {
"type": "PubMed",
"id": "33203921",
"url": "https://pubmed.ncbi.nlm.nih.gov/33203921"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M9NYI3-1",
"protein_name": "Galectin 17",
"gene_name": "igldcp",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "E7F147-1",
"protein_name": "Plac8 onzin related protein 1",
"gene_name": "ponzr1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F1QCC0-1",
"protein_name": "Troponin I type 2b (Skeletal, fast), tandem duplicate 1 isoform 1; Troponin I type 2b (Skeletal, fast), tandem duplicate 1 isoform 2",
"gene_name": "tnni2b.1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F6NVZ1-1",
"protein_name": "Interferon alpha inducible protein 27.2",
"gene_name": "ifi27.2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M9NYI3",
"url": "https://www.uniprot.org/uniprotkb/A0A8M9NYI3"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.33203921",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 4
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Phylogenetic relationships and gene expression pattern of three different cathepsin L (Ctsl) isoforms in zebrafish: Ctsla is the putative yolk processing enzyme.",
"journal": "Gene",
"date": "2007",
"authors": "Tingaud-Sequeira Ang\u00e8le, Cerd\u00e0 Joan",
"reference": {
"type": "PubMed",
"id": "17027199",
"url": "https://pubmed.ncbi.nlm.nih.gov/17027199"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6YUF9-1",
"protein_name": "Cathepsin S, ortholog 1 isoform X1",
"gene_name": "ctss1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB13ABU9-1",
"protein_name": "Cathepsin B",
"gene_name": "ctsbb",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6YUF9",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6YUF9"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.17027199",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Evolutionary History of Cathepsin L (L-like) Family Genes in Vertebrates.",
"journal": "Int. J. Biol. Sci.",
"date": "2015",
"authors": "Zhou Jin, Zhang Yao-Yang, Li Qing-Yun, Cai Zhong-Hua",
"reference": {
"type": "PubMed",
"id": "26221069",
"url": "https://pubmed.ncbi.nlm.nih.gov/26221069"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6YUF9-1",
"protein_name": "Cathepsin S, ortholog 1 isoform X1",
"gene_name": "ctss1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1NEU9-1",
"protein_name": "Uncharacterized protein LOC564835 precursor",
"gene_name": "ctslb.4; si:dkey-269i1.4",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "E9QBE2-1",
"protein_name": "Cystein proteinase inhibitor protein salarin",
"gene_name": "si:dkey-239j18.2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6YUF9",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6YUF9"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.26221069",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Expression profile analysis of two cathepsin S in channel catfish (Ictalurus punctatus) mucosal tissues following bacterial challenge.",
"journal": "Fish Shellfish Immunol.",
"date": "2016",
"authors": "Dong Xiaoyu, Ye Zhi, Song Lin, Su Baofeng, Zhao Honggang, Peatman Eric, Li Chao",
"reference": {
"type": "PubMed",
"id": "26626584",
"url": "https://pubmed.ncbi.nlm.nih.gov/26626584"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6YUF9-1",
"protein_name": "Cathepsin S, ortholog 1 isoform X1",
"gene_name": "ctss1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6YUF9",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6YUF9"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.26626584",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "TGF-ss Regulates Cathepsin Activation during Normal and Pathogenic Development.",
"journal": "Cell Rep.",
"date": "2018",
"authors": "Flanagan-Steet Heather, Christian Courtney, Lu Po-Nien, Aarnio-Peterson Megan, Sanman Laura, Archer-Hartmann Stephanie, Azadi Parastoo, Bogyo Matthew, Steet Richard A",
"reference": {
"type": "PubMed",
"id": "29539424",
"url": "https://pubmed.ncbi.nlm.nih.gov/29539424"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6YUF9-1",
"protein_name": "Cathepsin S, ortholog 1 isoform X1",
"gene_name": "ctss1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "B8A5X2-1",
"protein_name": "Sulfotransferase",
"gene_name": "chst3a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6YUF9",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6YUF9"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.29539424",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "RNA sequencing of isolated cell populations expressing human APOL1 G2 risk variant reveals molecular correlates of sickle cell nephropathy in zebrafish podocytes.",
"journal": "PLoS ONE",
"date": "2019",
"authors": "Bundy Joseph L, Anderson Blair R, Francescatto Ludmila, Garrett Melanie E, Soldano Karen L, Telen Marilyn J, Davis Erica E, Ashley-Koch Allison E",
"reference": {
"type": "PubMed",
"id": "31158233",
"url": "https://pubmed.ncbi.nlm.nih.gov/31158233"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6YUF9-1",
"protein_name": "Cathepsin S, ortholog 1 isoform X1",
"gene_name": "ctss1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6YUF9",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6YUF9"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.31158233",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Inappropriate cathepsin K secretion promotes its enzymatic activation driving heart and valve malformation.",
"journal": "JCI Insight",
"date": "2020",
"authors": "Lu Po-Nien, Moreland Trevor, Christian Courtney J, Lund Troy C, Steet Richard A, Flanagan-Steet Heather",
"reference": {
"type": "PubMed",
"id": "33055423",
"url": "https://pubmed.ncbi.nlm.nih.gov/33055423"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6YUF9-1",
"protein_name": "Cathepsin S, ortholog 1 isoform X1",
"gene_name": "ctss1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q5RGJ8-1",
"protein_name": "N-acetylglucosamine-1-phosphotransferase subunits alpha/beta",
"gene_name": "gnptab",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6YUF9",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6YUF9"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.33055423",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Modifier variant of METTL13 suppresses human GAB1-associated profound deafness.",
"journal": "J. Clin. Invest.",
"date": "2018",
"authors": "Yousaf R, Ahmed ZM, Giese AP, Morell RJ, Lagziel A, Dabdoub A, Wilcox ER, Riazuddin S, Friedman TB, Riazuddin S",
"reference": {
"type": "PubMed",
"id": "29408807",
"url": "https://pubmed.ncbi.nlm.nih.gov/29408807"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6YUV9-1",
"protein_name": "GRB2-associated-binding protein 1 isoform X1",
"gene_name": "gab1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q8N6R0-5",
"protein_name": "eEF1A lysine and N-terminal methyltransferase",
"gene_name": "METTL13",
"tax_name": "Human"
},
{
"uniprot_canonical_ac": "A5WVX1-1",
"protein_name": "eEF1A lysine and N-terminal methyltransferase",
"gene_name": "mettl13",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q9QYY0-1",
"protein_name": "GRB2-associated-binding protein 1",
"gene_name": "Gab1",
"tax_name": "Mouse"
},
{
"uniprot_canonical_ac": "Q13480-1",
"protein_name": "GRB2-associated-binding protein 1",
"gene_name": "GAB1",
"tax_name": "Human"
},
{
"uniprot_canonical_ac": "Q91YR5-3",
"protein_name": "eEF1A lysine and N-terminal methyltransferase",
"gene_name": "Mettl13",
"tax_name": "Mouse"
},
{
"uniprot_canonical_ac": "O43597-1",
"protein_name": "Protein sprouty homolog 2",
"gene_name": "SPRY2",
"tax_name": "Human"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6YUV9",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6YUV9"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.29408807",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 7
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Evidence from human and zebrafish that GPC1 is a biliary atresia susceptibility gene.",
"journal": "Gastroenterology",
"date": "2013",
"authors": "Cui Shuang, Leyva-Vega Melissa, Tsai Ellen A, EauClaire Steven F, Glessner Joseph T, Hakonarson Hakon, Devoto Marcella, Haber Barbara A, Spinner Nancy B, Matthews Randolph P",
"reference": {
"type": "PubMed",
"id": "23336978",
"url": "https://pubmed.ncbi.nlm.nih.gov/23336978"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6YWZ1-1",
"protein_name": "C2H2-type zinc finger protein isoform X1",
"gene_name": "si:dkey-14k9.3",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6YWZ1",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6YWZ1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.23336978",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Phylogenetic analysis and expression of zebrafish transient receptor potential melastatin family genes.",
"journal": "Dev. Dyn.",
"date": "2013",
"authors": "Kastenhuber Edda, Gesemann Matthias, Mickoleit Michaela, Neuhauss Stephan C F",
"reference": {
"type": "PubMed",
"id": "23908157",
"url": "https://pubmed.ncbi.nlm.nih.gov/23908157"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z1K6-1",
"protein_name": "Transient receptor potential cation channel subfamily M member 1a isoform X1",
"gene_name": "trpm1a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1P6E5-1",
"protein_name": "Transient receptor potential cation channel subfamily M member 4a",
"gene_name": "trpm4a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "S5UH55-1",
"protein_name": "Transient receptor potential cation channel subfamily M member 5",
"gene_name": "trpm5",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A0R4IMY7-1",
"protein_name": "Transient receptor potential cation channel subfamily M member 2",
"gene_name": "trpm2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z1K6",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z1K6"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.23908157",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 4
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "TFAP2 paralogs regulate melanocyte differentiation in parallel with MITF.",
"journal": "PLoS Genet.",
"date": "2017",
"authors": "Seberg HE, Van Otterloo E, Loftus SK, Liu H, Bonde G, Sompallae R, Gildea DE, Santana JF, Manak JR, Pavan WJ, Williams T, Cornell RA",
"reference": {
"type": "PubMed",
"id": "28249010",
"url": "https://pubmed.ncbi.nlm.nih.gov/28249010"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z1K6-1",
"protein_name": "Transient receptor potential cation channel subfamily M member 1a isoform X1",
"gene_name": "trpm1a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F1QWX4-1",
"protein_name": "Sepiapterin reductase",
"gene_name": "spra",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z1K6",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z1K6"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.28249010",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Differential Localization and Functional Roles of mGluR6 Paralogs in Zebrafish Retina.",
"journal": "Invest. Ophthalmol. Vis. Sci.",
"date": "2024",
"authors": "Haug Marion, Haddad-Velioglu Sara A, Berger Manuela, Enz Anja, Zang Jingjing, Neuhauss Stephan C F",
"reference": {
"type": "PubMed",
"id": "39475940",
"url": "https://pubmed.ncbi.nlm.nih.gov/39475940"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z1K6-1",
"protein_name": "Transient receptor potential cation channel subfamily M member 1a isoform X1",
"gene_name": "trpm1a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1NCL0-1",
"protein_name": "Glutamate receptor, metabotropic 6b precursor",
"gene_name": "grm6b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z1K6",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z1K6"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.39475940",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Toxicogenomic responses of zebrafish embryos/larvae to tris(1,3-dichloro-2-propyl) phosphate (TDCPP) reveal possible molecular mechanisms of developmental toxicity.",
"journal": "Environ. Sci. Technol.",
"date": "2013",
"authors": "Fu Jie, Han Jian, Zhou Bingsheng, Gong Zhiyuan, Santos Eduarda M, Huo Xiaojing, Zheng Weiling, Liu Hongling, Yu Hongxia, Liu Chunsheng",
"reference": {
"type": "PubMed",
"id": "23919627",
"url": "https://pubmed.ncbi.nlm.nih.gov/23919627"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6YZH0-1",
"protein_name": "Sodium-coupled neutral amino acid transporter 4",
"gene_name": "slc38a4",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1NFW3-1",
"protein_name": "Kazal-type serine peptidase inhibitor domain 2 precursor",
"gene_name": "kazald2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q1LWF1-1",
"protein_name": "Ethanolamine kinase",
"gene_name": "chka",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6YZH0",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6YZH0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.23919627",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Spatially resolved transcriptomics reveals the architecture of the tumor-microenvironment interface.",
"journal": "Nat. Commun.",
"date": "2021",
"authors": "Hunter Miranda V, Moncada Reuben, Weiss Joshua M, Yanai Itai, White Richard M",
"reference": {
"type": "PubMed",
"id": "34725363",
"url": "https://pubmed.ncbi.nlm.nih.gov/34725363"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6YZH0-1",
"protein_name": "Sodium-coupled neutral amino acid transporter 4",
"gene_name": "slc38a4",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A0R4IKF0-1",
"protein_name": "Apolipoprotein A-Ib precursor",
"gene_name": "apoa1b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "E7F1X6-1",
"protein_name": "Centromere protein X",
"gene_name": "cenpx",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "E9QE51-1",
"protein_name": "Targeting protein for Xklp2 isoform X1",
"gene_name": "tpx2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F1Q5I4-1",
"protein_name": "pancreatic elastase II",
"gene_name": "ela2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6YZH0",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6YZH0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.34725363",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 5
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Drosophila Varicose, a member of a new subgroup of basolateral MAGUKs, is required for septate junctions and tracheal morphogenesis.",
"journal": "Development",
"date": "2007",
"authors": "Wu Victoria M, Yu Marcus H, Paik Raehum, Banerjee Swati, Liang Zhiguo, Paul Sarah M, Bhat Manzoor A, Beitel Greg J",
"reference": {
"type": "PubMed",
"id": "17267446",
"url": "https://pubmed.ncbi.nlm.nih.gov/17267446"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z057-1",
"protein_name": "Peripheral plasma membrane protein CASK",
"gene_name": "caska",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q1LW94-1",
"protein_name": "MAGUK p55 subfamily member 6b",
"gene_name": "pals2b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1PQN9-1",
"protein_name": "55 kDa erythrocyte membrane protein",
"gene_name": "mpp1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1NWX5-1",
"protein_name": "Protein PALS1",
"gene_name": "pals1b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z057",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z057"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.17267446",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 4
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Novel CASK mutations in cases with syndromic microcephaly.",
"journal": "Hum. Mutat.",
"date": "2018",
"authors": "Cristofoli F, Devriendt K, Davis EE, Van Esch H, Vermeesch JR",
"reference": {
"type": "PubMed",
"id": "29691940",
"url": "https://pubmed.ncbi.nlm.nih.gov/29691940"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z057-1",
"protein_name": "Peripheral plasma membrane protein CASK",
"gene_name": "caska",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z057",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z057"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.29691940",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Hepassocin is required for hepatic outgrowth during zebrafish hepatogenesis.",
"journal": "Biochem. Biophys. Res. Commun.",
"date": "2015",
"authors": "Gao Ming, Yan Hui, Yin Rong-Hua, Wang Qiang, Zhan Yi-Qun, Yu Miao, Ge Chang-Hui, Li Chang-Yan, Wang Xiao-Hui, Ge Zhi-Qiang, Yang Xiao-Ming",
"reference": {
"type": "PubMed",
"id": "26047702",
"url": "https://pubmed.ncbi.nlm.nih.gov/26047702"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z0T1-1",
"protein_name": "Fibrinogen-like protein 1",
"gene_name": "fgl1b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z0T1",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z0T1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.26047702",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Changes in Olfactory Receptor Expression Are Correlated With Odor Exposure During Early Development in the zebrafish (Danio rerio).",
"journal": "Chem. Senses",
"date": "2016",
"authors": "Calf\u00fan Cristian, Dom\u00ednguez Calixto, P\u00e9rez-Acle Tom\u00e1s, Whitlock Kathleen E",
"reference": {
"type": "PubMed",
"id": "26892307",
"url": "https://pubmed.ncbi.nlm.nih.gov/26892307"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z100-1",
"protein_name": "Odorant receptor 137-3 isoform X1",
"gene_name": "or90b2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB40E4L5-1",
"protein_name": "Odorant receptor 136-1",
"gene_name": "or90h4",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "O42169-1",
"protein_name": "Odorant receptor 111-6",
"gene_name": "or42c3",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q2PRA6-1",
"protein_name": "Olfactory receptor",
"gene_name": "or62a3",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q2PRH7-1",
"protein_name": "Odorant receptor 115-5",
"gene_name": "or70a15",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q9PRJ2-1",
"protein_name": "Olfactory receptor",
"gene_name": "or30bt1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z100",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z100"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.26892307",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 6
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "D-glucuronyl C5-epimerase acts in dorso-ventral axis formation in zebrafish.",
"journal": "BMC Dev. Biol.",
"date": "2005",
"authors": "Ghiselli Giancarlo, Farber Steven A",
"reference": {
"type": "PubMed",
"id": "16156897",
"url": "https://pubmed.ncbi.nlm.nih.gov/16156897"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z2K0-1",
"protein_name": "ETS-related transcription factor Elf-1",
"gene_name": "elf1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F1QR43-1",
"protein_name": "D-glucuronyl C5-epimerase B",
"gene_name": "glceb",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z2K0",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z2K0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.16156897",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Androgens upregulate cyp19a1b (aromatase B) gene expression in the brain of zebrafish (Danio rerio) through estrogen receptors.",
"journal": "Biol. Reprod.",
"date": "2009",
"authors": "Mouriec Karen, Gueguen Marie-Madeleine, Manuel Christelle, Percevault Fr\u00e9d\u00e9ric, Thieulant Marie-Lise, Pakdel Farzad, Kah Olivier",
"reference": {
"type": "PubMed",
"id": "19129512",
"url": "https://pubmed.ncbi.nlm.nih.gov/19129512"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z2K0-1",
"protein_name": "ETS-related transcription factor Elf-1",
"gene_name": "elf1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z2K0",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z2K0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.19129512",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "ETS factors regulate Vegf-dependent arterial specification.",
"journal": "Dev. Cell",
"date": "2013",
"authors": "Wythe Joshua D, Dang Lan T H, Devine W Patrick, Boudreau Emilie, Artap Stanley T, He Daniel, Schachterle William, Stainier Didier Y R, Oettgen Peter, Black Brian L, Bruneau Benoit G, Fish Jason E",
"reference": {
"type": "PubMed",
"id": "23830865",
"url": "https://pubmed.ncbi.nlm.nih.gov/23830865"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z2K0-1",
"protein_name": "ETS-related transcription factor Elf-1",
"gene_name": "elf1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F1R0K1-1",
"protein_name": "ETS domain-containing protein Elk-4 isoform 1",
"gene_name": "elk4",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z2K0",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z2K0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.23830865",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Phylogeny and evolution of class-I helical cytokines.",
"journal": "J. Endocrinol.",
"date": "2006",
"authors": "Huising Mark O, Kruiswijk Corine P, Flik Gert",
"reference": {
"type": "PubMed",
"id": "16614377",
"url": "https://pubmed.ncbi.nlm.nih.gov/16614377"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z2C4-1",
"protein_name": "Interleukin-12 subunit alpha isoform X1",
"gene_name": "il12a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z2C4",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z2C4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.16614377",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "New insights into the evolution of IFNs: zebrafish group II IFNs induce a rapid and transient expression of IFN-dependent genes and display powerful antiviral activities.",
"journal": "J. Immunol.",
"date": "2009",
"authors": "L\u00f3pez-Mu\u00f1oz Azucena, Roca Francisco J, Meseguer Jos\u00e9, Mulero Victoriano",
"reference": {
"type": "PubMed",
"id": "19265122",
"url": "https://pubmed.ncbi.nlm.nih.gov/19265122"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z2C4-1",
"protein_name": "Interleukin-12 subunit alpha isoform X1",
"gene_name": "il12a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A8E6E3-1",
"protein_name": "Interferon phi 3 precursor",
"gene_name": "ifnphi3",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AC58H6L3-1",
"protein_name": "Caspase-3",
"gene_name": "casp3b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z2C4",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z2C4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.19265122",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "CD154-CD40 interactions are essential for thymus-dependent antibody production in zebrafish: insights into the origin of costimulatory pathway in helper T cell-regulated adaptive immunity in early vertebrates.",
"journal": "J. Immunol.",
"date": "2009",
"authors": "Gong Yong-Feng, Xiang Li-Xin, Shao Jian-Zhong",
"reference": {
"type": "PubMed",
"id": "19494299",
"url": "https://pubmed.ncbi.nlm.nih.gov/19494299"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z2C4-1",
"protein_name": "Interleukin-12 subunit alpha isoform X1",
"gene_name": "il12a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z2C4",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z2C4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.19494299",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Pinostrobin ameliorates lipopolysaccharide (LPS)-induced inflammation and endotoxemia by inhibiting LPS binding to the TLR4/MD2 complex.",
"journal": "Biomed. Pharmacother.",
"date": "2022",
"authors": "Athapaththu Athapaththu Mudiyanselage Gihan Kavinda, Lee Kyeong Tae, Kavinda Mirissa Hewage Dumindu, Lee Seunghun, Kang Sanghyuck, Lee Mi-Hwa, Kang Chang-Hee, Choi Yung Hyun, Kim Gi-Young",
"reference": {
"type": "PubMed",
"id": "36270256",
"url": "https://pubmed.ncbi.nlm.nih.gov/36270256"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z2C4-1",
"protein_name": "Interleukin-12 subunit alpha isoform X1",
"gene_name": "il12a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z2C4",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z2C4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.36270256",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Preparation and Characterization of Ginger Peel Polysaccharide-Zn (II) Complexes and Evaluation of Anti-Inflammatory Activity.",
"journal": "Antioxidants",
"date": "2022",
"authors": "Li Wenwen, Qiu Zhichang, Ma Yue, Zhang Bin, Li Lingyu, Li Qiulin, He Qiuxia, Zheng Zhenjia",
"reference": {
"type": "PubMed",
"id": "36552539",
"url": "https://pubmed.ncbi.nlm.nih.gov/36552539"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z2C4-1",
"protein_name": "Interleukin-12 subunit alpha isoform X1",
"gene_name": "il12a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z2C4",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z2C4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.36552539",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Trans-Activation between EphA and FGFR Regulates Self-Renewal and Differentiation of Mouse Embryonic Neural Stem/Progenitor Cells via Differential Activation of FRS2alpha.",
"journal": "PLoS ONE",
"date": "2015",
"authors": "Sawada Takahiro, Arai Daiki, Jing Xuefeng, Furushima Kenryo, Chen Qingfa, Kawakami Kazuki, Yokote Hideyuki, Miyajima Masayasu, Sakaguchi Kazushige",
"reference": {
"type": "PubMed",
"id": "26024354",
"url": "https://pubmed.ncbi.nlm.nih.gov/26024354"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M6Z5Y5-1",
"protein_name": "Fibroblast growth factor receptor substrate 2a isoform X1",
"gene_name": "frs2a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M6Z5Y5",
"url": "https://www.uniprot.org/uniprotkb/A0A8M6Z5Y5"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.26024354",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Origin of the prolactin-releasing hormone (PRLH) receptors: evidence of coevolution between PRLH and a redundant neuropeptide Y receptor during vertebrate evolution.",
"journal": "Genomics",
"date": "2005",
"authors": "Lagerstr\u00f6m Malin C, Fredriksson Robert, Bjarnad\u00f3ttir Th\u00f3ra K, Fridmanis Davids, Holmquist Tomas, Andersson Jan, Yan Yi-Lin, Raudsepp Terje, Zoorob Rima, Kukkonen Jyrki P, Lundin Lars-Gustav, Klovins Janis, Chowdhary Bhanu P, Postlethwait John H, Schi\u00f6th Helgi B",
"reference": {
"type": "PubMed",
"id": "15885496",
"url": "https://pubmed.ncbi.nlm.nih.gov/15885496"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M9P097-1",
"protein_name": "Monocarboxylate transporter 9",
"gene_name": "slc16a9a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M9P097",
"url": "https://www.uniprot.org/uniprotkb/A0A8M9P097"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.15885496",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "In vitro characterization of zebrafish (Danio rerio) organic anion transporters Oat2a-e.",
"journal": "Toxicol. in Vitro",
"date": "2018",
"authors": "Dragojevi\u0107 Jelena, Mihaljevi\u0107 Ivan, Popovi\u0107 Marta, Zaja Roko, Smital Tvrtko",
"reference": {
"type": "PubMed",
"id": "29030288",
"url": "https://pubmed.ncbi.nlm.nih.gov/29030288"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M9P097-1",
"protein_name": "Monocarboxylate transporter 9",
"gene_name": "slc16a9a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N882-1",
"protein_name": "Alpha-actinin-2b",
"gene_name": "actn2b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M9P097",
"url": "https://www.uniprot.org/uniprotkb/A0A8M9P097"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.29030288",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Mutations in SLC39A14 disrupt manganese homeostasis and cause childhood-onset parkinsonism-dystonia.",
"journal": "Nature communications",
"date": "2016",
"authors": "Tuschl K, Meyer E, Valdivia LE, Zhao N, Dadswell C, Abdul-Sada A, Hung CY, Simpson MA, Chong WK, Jacques TS, Woltjer RL, Eaton S, Gregory A, Sanford L, Kara E, Houlden H, Cuno SM, Prokisch H, Valletta L, Tiranti V, Younis R, Maher ER, Spencer J, Straatman-Iwanowska A, Gissen P, Selim LA, Pintos-Morell G, Coroleu-Lletget W, Mohammad SS, Yoganathan S, Dale RC, Thomas M, Rihel J, Bodamer OA, Enns CA, Hayflick SJ, Clayton PT, Mills PB, Kurian MA, Wilson SW",
"reference": {
"type": "PubMed",
"id": "27231142",
"url": "https://pubmed.ncbi.nlm.nih.gov/27231142"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0G2KQY6-1",
"protein_name": "Metal cation symporter ZIP14",
"gene_name": "slc39a14",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q15043-1",
"protein_name": "Metal cation symporter ZIP14",
"gene_name": "SLC39A14",
"tax_name": "Human"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0G2KQY6",
"url": "https://www.uniprot.org/uniprotkb/A0A0G2KQY6"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.27231142",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Structure and mechanism of the cation-chloride cotransporter NKCC1.",
"journal": "Nature",
"date": "2019-08",
"authors": "Chew Thomas A, Orlando Benjamin J, Zhang Jinru, Latorraca Naomi R, Wang Amy, Hollingsworth Scott A, Chen Dong-Hua, Dror Ron O, Liao Maofu, Feng Liang",
"reference": {
"type": "PubMed",
"id": "31367042",
"url": "https://pubmed.ncbi.nlm.nih.gov/31367042"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0G2KTI4-1",
"protein_name": "Solute carrier family 12 member 2",
"gene_name": "slc12a2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0G2KTI4",
"url": "https://www.uniprot.org/uniprotkb/A0A0G2KTI4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"mutagenesis": [
{
"start_pos": 220,
"end_pos": 220,
"sequence_org": "N",
"sequence_mut": "A",
"comment": "Moderately impairs transporter activity.",
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0G2KTI4",
"url": "https://www.uniprot.org/uniprotkb/A0A0G2KTI4"
},
{
"database": "PubMed",
"id": "31367042",
"url": "https://pubmed.ncbi.nlm.nih.gov/31367042"
}
],
"uniprot_canonical_ac": "A0A0G2KTI4-1"
},
{
"start_pos": 305,
"end_pos": 305,
"sequence_org": "Y",
"sequence_mut": "F",
"comment": "Severely impairs transporter activity.",
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0G2KTI4",
"url": "https://www.uniprot.org/uniprotkb/A0A0G2KTI4"
},
{
"database": "PubMed",
"id": "31367042",
"url": "https://pubmed.ncbi.nlm.nih.gov/31367042"
}
],
"uniprot_canonical_ac": "A0A0G2KTI4-1"
},
{
"start_pos": 305,
"end_pos": 305,
"sequence_org": "Y",
"sequence_mut": "H",
"comment": "Severely impairs transporter activity.",
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0G2KTI4",
"url": "https://www.uniprot.org/uniprotkb/A0A0G2KTI4"
},
{
"database": "PubMed",
"id": "31367042",
"url": "https://pubmed.ncbi.nlm.nih.gov/31367042"
}
],
"uniprot_canonical_ac": "A0A0G2KTI4-1"
},
{
"start_pos": 305,
"end_pos": 305,
"sequence_org": "Y",
"sequence_mut": "W",
"comment": "Severely impairs transporter activity.",
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0G2KTI4",
"url": "https://www.uniprot.org/uniprotkb/A0A0G2KTI4"
},
{
"database": "PubMed",
"id": "31367042",
"url": "https://pubmed.ncbi.nlm.nih.gov/31367042"
}
],
"uniprot_canonical_ac": "A0A0G2KTI4-1"
},
{
"start_pos": 454,
"end_pos": 454,
"sequence_org": "Y",
"sequence_mut": "A",
"comment": "Severely impairs transporter activity.",
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0G2KTI4",
"url": "https://www.uniprot.org/uniprotkb/A0A0G2KTI4"
},
{
"database": "PubMed",
"id": "31367042",
"url": "https://pubmed.ncbi.nlm.nih.gov/31367042"
}
],
"uniprot_canonical_ac": "A0A0G2KTI4-1"
},
{
"start_pos": 538,
"end_pos": 538,
"sequence_org": "S",
"sequence_mut": "A",
"comment": "Severely impairs transporter activity.",
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0G2KTI4",
"url": "https://www.uniprot.org/uniprotkb/A0A0G2KTI4"
},
{
"database": "PubMed",
"id": "31367042",
"url": "https://pubmed.ncbi.nlm.nih.gov/31367042"
}
],
"uniprot_canonical_ac": "A0A0G2KTI4-1"
},
{
"start_pos": 539,
"end_pos": 539,
"sequence_org": "S",
"sequence_mut": "A",
"comment": "Severely impairs transporter activity.",
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0G2KTI4",
"url": "https://www.uniprot.org/uniprotkb/A0A0G2KTI4"
},
{
"database": "PubMed",
"id": "31367042",
"url": "https://pubmed.ncbi.nlm.nih.gov/31367042"
}
],
"uniprot_canonical_ac": "A0A0G2KTI4-1"
},
{
"start_pos": 611,
"end_pos": 611,
"sequence_org": "Y",
"sequence_mut": "A",
"comment": "Severely impairs transporter activity.",
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0G2KTI4",
"url": "https://www.uniprot.org/uniprotkb/A0A0G2KTI4"
},
{
"database": "PubMed",
"id": "31367042",
"url": "https://pubmed.ncbi.nlm.nih.gov/31367042"
}
],
"uniprot_canonical_ac": "A0A0G2KTI4-1"
},
{
"start_pos": 630,
"end_pos": 630,
"sequence_org": "R",
"sequence_mut": "A",
"comment": "Severely impairs transporter activity.",
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0G2KTI4",
"url": "https://www.uniprot.org/uniprotkb/A0A0G2KTI4"
},
{
"database": "PubMed",
"id": "31367042",
"url": "https://pubmed.ncbi.nlm.nih.gov/31367042"
}
],
"uniprot_canonical_ac": "A0A0G2KTI4-1"
},
{
"start_pos": 682,
"end_pos": 682,
"sequence_org": "N",
"sequence_mut": "A",
"comment": "Severely impairs transporter activity.",
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0G2KTI4",
"url": "https://www.uniprot.org/uniprotkb/A0A0G2KTI4"
},
{
"database": "PubMed",
"id": "31367042",
"url": "https://pubmed.ncbi.nlm.nih.gov/31367042"
}
],
"uniprot_canonical_ac": "A0A0G2KTI4-1"
},
{
"start_pos": 686,
"end_pos": 686,
"sequence_org": "S",
"sequence_mut": "A",
"comment": "Severely impairs transporter activity.",
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0G2KTI4",
"url": "https://www.uniprot.org/uniprotkb/A0A0G2KTI4"
},
{
"database": "PubMed",
"id": "31367042",
"url": "https://pubmed.ncbi.nlm.nih.gov/31367042"
}
],
"uniprot_canonical_ac": "A0A0G2KTI4-1"
}
],
"record_id": "pubmed.31367042",
"abstract": "",
"glycosylation": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Mutations in SPRTN cause early onset hepatocellular carcinoma, genomic instability and progeroid features.",
"journal": "Nat. Genet.",
"date": "2014",
"authors": "Lessel D, Vaz B, Halder S, Lockhart PJ, Marinovic-Terzic I, Lopez-Mosqueda J, Philipp M, Sim JC, Smith KR, Oehler J, Cabrera E, Freire R, Pope K, Nahid A, Norris F, Leventer RJ, Delatycki MB, Barbi G, von Ameln S, Hogel J, Degoricija M, Fertig R, Burkhalter MD, Hofmann K, Thiele H, Altmuller J, Nurnberg G, Nurnberg P, Bahlo M, Martin GM, Aalfs CM, Oshima J, Terzic J, Amor DJ, Dikic I, Ramadan K, Kubisch C",
"reference": {
"type": "PubMed",
"id": "25261934",
"url": "https://pubmed.ncbi.nlm.nih.gov/25261934"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0G2L7I0-1",
"protein_name": "DNA-dependent metalloprotease SPRTN",
"gene_name": "sprtn",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q9H040-1",
"protein_name": "DNA-dependent metalloprotease SPRTN",
"gene_name": "SPRTN",
"tax_name": "Human"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0G2L7I0",
"url": "https://www.uniprot.org/uniprotkb/A0A0G2L7I0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.25261934",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Tdp1 protects from topoisomerase 1-mediated chromosomal breaks in adult zebrafish but is dispensable during larval development.",
"journal": "Sci. Adv.",
"date": "2021",
"authors": "Zaksauskaite Ringaile, Thomas Ruth C, van Eeden Freek, El-Khamisy Sherif F",
"reference": {
"type": "PubMed",
"id": "33514542",
"url": "https://pubmed.ncbi.nlm.nih.gov/33514542"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0G2L7I0-1",
"protein_name": "DNA-dependent metalloprotease SPRTN",
"gene_name": "sprtn",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M9QPT3-1",
"protein_name": "Double-strand break repair protein",
"gene_name": "mre11a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0G2L7I0",
"url": "https://www.uniprot.org/uniprotkb/A0A0G2L7I0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.33514542",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Tyrosyl-DNA phosphodiesterase 1 (TDP1) and SPRTN protease repair histone 3 and topoisomerase 1 DNA-protein crosslinks in vivo.",
"journal": "Open Biol.",
"date": "2023",
"authors": "Anticevic Ivan, Otten Cecile, Vinkovic Luka, Jukic Luka, Popovic Marta",
"reference": {
"type": "PubMed",
"id": "37788708",
"url": "https://pubmed.ncbi.nlm.nih.gov/37788708"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0G2L7I0-1",
"protein_name": "DNA-dependent metalloprotease SPRTN",
"gene_name": "sprtn",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0G2L7I0",
"url": "https://www.uniprot.org/uniprotkb/A0A0G2L7I0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.37788708",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "A human laterality disorder caused by a homozygous deleterious mutation in MMP21.",
"journal": "Journal of medical genetics",
"date": "2015",
"authors": "Perles Z, Moon S, Ta-Shma A, Yaacov B, Francescatto L, Edvardson S, Rein AJ, Elpeleg O, Katsanis N",
"reference": {
"type": "PubMed",
"id": "26429889",
"url": "https://pubmed.ncbi.nlm.nih.gov/26429889"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0N9E2K8-1",
"protein_name": "Matrix metallopeptidase-21",
"gene_name": "mmp21",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB12YY49-1",
"protein_name": "Transcription factor HES-5",
"gene_name": "her15.2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q9BVV6-1",
"protein_name": "Protein TALPID3",
"gene_name": "KIAA0586",
"tax_name": "Human"
},
{
"uniprot_canonical_ac": "Q8N119-1",
"protein_name": "Matrix metalloproteinase-21",
"gene_name": "MMP21",
"tax_name": "Human"
},
{
"uniprot_canonical_ac": "P21802-1",
"protein_name": "Fibroblast growth factor receptor 2",
"gene_name": "FGFR2",
"tax_name": "Human"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0N9E2K8",
"url": "https://www.uniprot.org/uniprotkb/A0A0N9E2K8"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.26429889",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 5
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "MMP21 is mutated in human heterotaxy and is required for normal left-right asymmetry in vertebrates.",
"journal": "Nature genetics",
"date": "2015",
"authors": "Guimier A, Gabriel GC, Bajolle F, Tsang M, Liu H, Noll A, Schwartz M, El Malti R, Smith LD, Klena NT, Jimenez G, Miller NA, Oufadem M, Moreau de Bellaing A, Yagi H, Saunders CJ, Baker CN, Di Filippo S, Peterson KA, Thiffault I, Bole-Feysot C, Cooley LD, Farrow EG, Masson C, Schoen P, Deleuze JF, Nitschke P, Lyonnet S, de Pontual L, Murray SA, Bonnet D, Kingsmore SF, Amiel J, Bouvagnet P, Lo CW, Gordon CT",
"reference": {
"type": "PubMed",
"id": "26437028",
"url": "https://pubmed.ncbi.nlm.nih.gov/26437028"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0N9E2K8-1",
"protein_name": "Matrix metallopeptidase-21",
"gene_name": "mmp21",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q8K3F2-1",
"protein_name": "Matrix metalloproteinase-21",
"gene_name": "Mmp21",
"tax_name": "Mouse"
},
{
"uniprot_canonical_ac": "Q8N119-1",
"protein_name": "Matrix metalloproteinase-21",
"gene_name": "MMP21",
"tax_name": "Human"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0N9E2K8",
"url": "https://www.uniprot.org/uniprotkb/A0A0N9E2K8"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"mutagenesis": [
{
"start_pos": 225,
"end_pos": 225,
"sequence_org": "I",
"sequence_mut": "T",
"comment": "Embryos have congenital heart defects with transposition of the great artery, 61% exhibiting situs inversus or heterotaxy and 39% exhibiting situs solitus. This mutation corresponds to the pathological variant 'T-226' identified in humans.",
"evidence": [
{
"database": "UniProtKB",
"id": "Q8K3F2",
"url": "https://www.uniprot.org/uniprotkb/Q8K3F2"
},
{
"database": "PubMed",
"id": "26437028",
"url": "https://pubmed.ncbi.nlm.nih.gov/26437028"
}
],
"uniprot_canonical_ac": "Q8K3F2-1"
}
],
"record_id": "pubmed.26437028",
"abstract": "",
"glycosylation": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Identification of RNF213 as a susceptibility gene for moyamoya disease and its possible role in vascular development.",
"journal": "PLoS ONE",
"date": "2011",
"authors": "Liu W, Morito D, Takashima S, Mineharu Y, Kobayashi H, Hitomi T, Hashikata H, Matsuura N, Yamazaki S, Toyoda A, Kikuta K, Takagi Y, Harada KH, Fujiyama A, Herzig R, Krischek B, Zou L, Kim JE, Kitakaze M, Miyamoto S, Nagata K, Hashimoto N, Koizumi A",
"reference": {
"type": "PubMed",
"id": "21799892",
"url": "https://pubmed.ncbi.nlm.nih.gov/21799892"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4I9Y1-1",
"protein_name": "E3 ubiquitin-protein ligase rnf213-beta",
"gene_name": "rnf213b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A0R4IBK5-1",
"protein_name": "E3 ubiquitin-protein ligase rnf213-alpha",
"gene_name": "rnf213a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB13A8X0-1",
"protein_name": "RING-type E3 ubiquitin transferase",
"gene_name": "rnf213b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q63HN8-3",
"protein_name": "E3 ubiquitin-protein ligase RNF213",
"gene_name": "RNF213",
"tax_name": "Human"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4I9Y1",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4I9Y1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.21799892",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 4
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Neuromuscular regulation in zebrafish by a large AAA+ ATPase/ubiquitin ligase, mysterin/RNF213.",
"journal": "Sci. Rep.",
"date": "2015",
"authors": "Kotani Yuri, Morito Daisuke, Yamazaki Satoru, Ogino Kazutoyo, Kawakami Koichi, Takashima Seiji, Hirata Hiromi, Nagata Kazuhiro",
"reference": {
"type": "PubMed",
"id": "26530008",
"url": "https://pubmed.ncbi.nlm.nih.gov/26530008"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4I9Y1-1",
"protein_name": "E3 ubiquitin-protein ligase rnf213-beta",
"gene_name": "rnf213b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A0R4IBK5-1",
"protein_name": "E3 ubiquitin-protein ligase rnf213-alpha",
"gene_name": "rnf213a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB13A8X0-1",
"protein_name": "RING-type E3 ubiquitin transferase",
"gene_name": "rnf213b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4I9Y1",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4I9Y1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.26530008",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Mutation of rnf213a by TALEN causes abnormal angiogenesis and circulation defects in zebrafish.",
"journal": "Brain Res.",
"date": "2016",
"authors": "Wen Jun, Sun Xunsha, Chen Huimin, Liu Huijiao, Lai Rong, Li Jiaoxing, Wang Yufang, Zhang Jingjing, Sheng Wenli",
"reference": {
"type": "PubMed",
"id": "27125596",
"url": "https://pubmed.ncbi.nlm.nih.gov/27125596"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IBK5-1",
"protein_name": "E3 ubiquitin-protein ligase rnf213-alpha",
"gene_name": "rnf213a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IBK5",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IBK5"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.27125596",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "The AAA+ ATPase/ubiquitin ligase mysterin stabilizes cytoplasmic lipid droplets.",
"journal": "The Journal of cell biology",
"date": "2019",
"authors": "Sugihara M, Morito D, Ainuki S, Hirano Y, Ogino K, Kitamura A, Hirata H, Nagata K",
"reference": {
"type": "PubMed",
"id": "30705059",
"url": "https://pubmed.ncbi.nlm.nih.gov/30705059"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IBK5-1",
"protein_name": "E3 ubiquitin-protein ligase rnf213-alpha",
"gene_name": "rnf213a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q63HN8-3",
"protein_name": "E3 ubiquitin-protein ligase RNF213",
"gene_name": "RNF213",
"tax_name": "Human"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IBK5",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IBK5"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"mutagenesis": [
{
"start_pos": 2426,
"end_pos": 2426,
"sequence_org": "K",
"sequence_mut": "A",
"comment": "Impaired ATP-binding leading to decreased ATPase activity; abolished ubiquitination of lipopolysaccharide. In mutant A1A2; abolished ATP-binding and localization to lipid droplets; when associated with A-2775. Loss of coat formation on pathogens.",
"evidence": [
{
"database": "UniProtKB",
"id": "Q63HN8",
"url": "https://www.uniprot.org/uniprotkb/Q63HN8"
},
{
"database": "PubMed",
"id": "24658080",
"url": "https://pubmed.ncbi.nlm.nih.gov/24658080"
},
{
"database": "PubMed",
"id": "34012115",
"url": "https://pubmed.ncbi.nlm.nih.gov/34012115"
},
{
"database": "PubMed",
"id": "30705059",
"url": "https://pubmed.ncbi.nlm.nih.gov/30705059"
},
{
"database": "PubMed",
"id": "39375464",
"url": "https://pubmed.ncbi.nlm.nih.gov/39375464"
}
],
"uniprot_canonical_ac": "Q63HN8-3"
},
{
"start_pos": 2488,
"end_pos": 2488,
"sequence_org": "E",
"sequence_mut": "A",
"comment": "Decreased ATPase activity; abolished ubiquitination of lipopolysaccharide. In mutant B1B2; abolished ATPase activity and localization to lipid droplets; when associated with A-2845. Loss of coat formation on pathogens.",
"evidence": [
{
"database": "UniProtKB",
"id": "Q63HN8",
"url": "https://www.uniprot.org/uniprotkb/Q63HN8"
},
{
"database": "PubMed",
"id": "24658080",
"url": "https://pubmed.ncbi.nlm.nih.gov/24658080"
},
{
"database": "PubMed",
"id": "34012115",
"url": "https://pubmed.ncbi.nlm.nih.gov/34012115"
},
{
"database": "PubMed",
"id": "30705059",
"url": "https://pubmed.ncbi.nlm.nih.gov/30705059"
},
{
"database": "PubMed",
"id": "39375464",
"url": "https://pubmed.ncbi.nlm.nih.gov/39375464"
}
],
"uniprot_canonical_ac": "Q63HN8-3"
},
{
"start_pos": 2775,
"end_pos": 2775,
"sequence_org": "K",
"sequence_mut": "A",
"comment": "Impaired ATP-binding leading to decreased ATPase activity; abolished ubiquitination of lipopolysaccharide. In mutant A1A2; abolished ATP-binding and localization to lipid droplets; when associated with A-2426. Loss of coat formation on pathogens.",
"evidence": [
{
"database": "UniProtKB",
"id": "Q63HN8",
"url": "https://www.uniprot.org/uniprotkb/Q63HN8"
},
{
"database": "PubMed",
"id": "24658080",
"url": "https://pubmed.ncbi.nlm.nih.gov/24658080"
},
{
"database": "PubMed",
"id": "34012115",
"url": "https://pubmed.ncbi.nlm.nih.gov/34012115"
},
{
"database": "PubMed",
"id": "30705059",
"url": "https://pubmed.ncbi.nlm.nih.gov/30705059"
},
{
"database": "PubMed",
"id": "39375464",
"url": "https://pubmed.ncbi.nlm.nih.gov/39375464"
}
],
"uniprot_canonical_ac": "Q63HN8-3"
},
{
"start_pos": 2845,
"end_pos": 2845,
"sequence_org": "E",
"sequence_mut": "A",
"comment": "Decreased ATPase activity; abolished ubiquitination of lipopolysaccharide. In mutant B1B2; abolished ATPase activity and localization to lipid droplets; when associated with A-2488. Loss of coat formation on pathogens.",
"evidence": [
{
"database": "UniProtKB",
"id": "Q63HN8",
"url": "https://www.uniprot.org/uniprotkb/Q63HN8"
},
{
"database": "PubMed",
"id": "24658080",
"url": "https://pubmed.ncbi.nlm.nih.gov/24658080"
},
{
"database": "PubMed",
"id": "34012115",
"url": "https://pubmed.ncbi.nlm.nih.gov/34012115"
},
{
"database": "PubMed",
"id": "30705059",
"url": "https://pubmed.ncbi.nlm.nih.gov/30705059"
},
{
"database": "PubMed",
"id": "39375464",
"url": "https://pubmed.ncbi.nlm.nih.gov/39375464"
}
],
"uniprot_canonical_ac": "Q63HN8-3"
}
],
"record_id": "pubmed.30705059",
"abstract": "",
"glycosylation": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Mutations of RNF213 are responsible for sporadic cerebral cavernous malformation and lead to a mulberry-like cluster in zebrafish.",
"journal": "J. Cereb. Blood Flow Metab.",
"date": "2021",
"authors": "Lin Jing, Liang Jie, Wen Jun, Luo Man, Li Jiaoxing, Sun Xunsha, Xu Xiaowei, Li Jianli, Wang Dongxian, Wang Jie, Chen Huimin, Lai Rong, Liang Fengyin, Li Chuan, Ye Fei, Zhang Jingjing, Zeng Jinsheng, Yang Shulan, Sheng Wenli",
"reference": {
"type": "PubMed",
"id": "32248732",
"url": "https://pubmed.ncbi.nlm.nih.gov/32248732"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IBK5-1",
"protein_name": "E3 ubiquitin-protein ligase rnf213-alpha",
"gene_name": "rnf213a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1PEJ8-1",
"protein_name": "glutathione transferase",
"gene_name": "gstt2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB13A8X0-1",
"protein_name": "RING-type E3 ubiquitin transferase",
"gene_name": "rnf213b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AC58GVK8-1",
"protein_name": "NAD(+) diphosphatase",
"gene_name": "nudt13",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IBK5",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IBK5"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.32248732",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 4
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Notch1b and neuregulin are required for specification of central cardiac conduction tissue.",
"journal": "Development",
"date": "2006",
"authors": "Milan David J, Giokas Andrea C, Serluca Fabrizio C, Peterson Randall T, MacRae Calum A",
"reference": {
"type": "PubMed",
"id": "16481353",
"url": "https://pubmed.ncbi.nlm.nih.gov/16481353"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IBM0-1",
"protein_name": "Pro-neuregulin-1, membrane-bound isoform isoform IIb12",
"gene_name": "nrg1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IBM0",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IBM0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.16481353",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Neuregulin-mediated ErbB3 signaling is required for formation of zebrafish dorsal root ganglion neurons.",
"journal": "Development",
"date": "2008",
"authors": "Honjo Yasuko, Kniss Jonathan, Eisen Judith S",
"reference": {
"type": "PubMed",
"id": "18599505",
"url": "https://pubmed.ncbi.nlm.nih.gov/18599505"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IBM0-1",
"protein_name": "Pro-neuregulin-1, membrane-bound isoform isoform IIb12",
"gene_name": "nrg1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB32TAC4-1",
"protein_name": "Neuregulin 2a isoform X1",
"gene_name": "nrg2a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IBM0",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IBM0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.18599505",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Disrupted-in-schizophrenia 1 and neuregulin 1 are required for the specification of oligodendrocytes and neurones in the zebrafish brain.",
"journal": "Hum. Mol. Genet.",
"date": "2009",
"authors": "Wood Jonathan D, Bonath Franziska, Kumar Shashvita, Ross Christopher A, Cunliffe Vincent T",
"reference": {
"type": "PubMed",
"id": "18996920",
"url": "https://pubmed.ncbi.nlm.nih.gov/18996920"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IBM0-1",
"protein_name": "Pro-neuregulin-1, membrane-bound isoform isoform IIb12",
"gene_name": "nrg1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IBM0",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IBM0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.18996920",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Interplay between calcium and sarcomeres directs cardiomyocyte maturation during regeneration.",
"journal": "Science",
"date": "2023",
"authors": "Bakkers J., Nguyen P.D., Bartscherer K., Chocron S., Mulder A.A., Verkerk A.O., Mummery C.L., Vink A., Campostrini G., Tzahor E., Lamers G.E.M., de Boer T.P., de Bakker D.E.M., Bouwman M., Honkoop H., Shakked A., Bellin M., Gooijers I., Koopmans T., Mars J.",
"reference": {
"type": "PubMed",
"id": "37200435",
"url": "https://pubmed.ncbi.nlm.nih.gov/37200435"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IBM0-1",
"protein_name": "Pro-neuregulin-1, membrane-bound isoform isoform IIb12",
"gene_name": "nrg1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IBM0",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IBM0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.37200435",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "The interplay of common genetic variants NRG1 rs2439302 and RET rs2435357 increases the risk of developing Hirschsprung's disease.",
"journal": "Front. Cell Dev. Biol.",
"date": "2023",
"authors": "Chi Shuiqing, Li Shuai, Cao Guoqing, Guo Jialing, Han Yunqiao, Zhou Yun, Zhang Xi, Li Yibo, Luo Zhibin, Li Xiangyang, Rong Liying, Zhang Mengxin, Li Linglu, Tang Shaotao",
"reference": {
"type": "PubMed",
"id": "37484916",
"url": "https://pubmed.ncbi.nlm.nih.gov/37484916"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IBM0-1",
"protein_name": "Pro-neuregulin-1, membrane-bound isoform isoform IIb12",
"gene_name": "nrg1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IBM0",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IBM0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.37484916",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Gravin regulates mesodermal cell behavior changes required for axis elongation during zebrafish gastrulation.",
"journal": "Genes Dev.",
"date": "2007",
"authors": "Weiser Douglas C, Pyati Ujwal J, Kimelman David",
"reference": {
"type": "PubMed",
"id": "17575056",
"url": "https://pubmed.ncbi.nlm.nih.gov/17575056"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IC31-1",
"protein_name": "A-kinase anchor protein 12b isoform 1",
"gene_name": "akap12b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IC31",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IC31"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.17575056",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Cell shape regulation by Gravin requires N-terminal membrane effector domains.",
"journal": "Biochem. Biophys. Res. Commun.",
"date": "2008",
"authors": "Weiser Douglas C, St Julien Krystal R, Lang James S, Kimelman David",
"reference": {
"type": "PubMed",
"id": "18725198",
"url": "https://pubmed.ncbi.nlm.nih.gov/18725198"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IC31-1",
"protein_name": "A-kinase anchor protein 12b isoform 1",
"gene_name": "akap12b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IC31",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IC31"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.18725198",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "AKAP12 regulates vascular integrity in zebrafish.",
"journal": "Exp. Mol. Med.",
"date": "2012",
"authors": "Kwon Hyouk-Bum, Choi Yoon Kyung, Lim Jhong-Jae, Kwon Seung-Hae, Her Song, Kim Hyun-Jin, Lim Kyung-Joon, Ahn Jong-Chan, Kim Young-Myeong, Bae Moon-Kyung, Park Jeong Ae, Jeong Chul-Ho, Mochizuki Naoki, Kim Kyu-Won",
"reference": {
"type": "PubMed",
"id": "22192928",
"url": "https://pubmed.ncbi.nlm.nih.gov/22192928"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IC31-1",
"protein_name": "A-kinase anchor protein 12b isoform 1",
"gene_name": "akap12b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IC31",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IC31"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.22192928",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Akap12 is essential for the morphogenesis of muscles involved in zebrafish locomotion.",
"journal": "Differentiation",
"date": "2014",
"authors": "Kim Hyun-Ho, Kim Jeong-gyun, Jeong Jinkyung, Han Song-Yi, Kim Kyu-Won",
"reference": {
"type": "PubMed",
"id": "25534553",
"url": "https://pubmed.ncbi.nlm.nih.gov/25534553"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IC31-1",
"protein_name": "A-kinase anchor protein 12b isoform 1",
"gene_name": "akap12b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IC31",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IC31"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.25534553",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Automated detection and quantification of single RNAs at cellular resolution in zebrafish embryos.",
"journal": "Development",
"date": "2016",
"authors": "Stapel L Carine, Lombardot Benoit, Broaddus Coleman, Kainmueller Dagmar, Jug Florian, Myers Eugene W, Vastenhouw Nadine L",
"reference": {
"type": "PubMed",
"id": "26700682",
"url": "https://pubmed.ncbi.nlm.nih.gov/26700682"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IC31-1",
"protein_name": "A-kinase anchor protein 12b isoform 1",
"gene_name": "akap12b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "E7EXU6-1",
"protein_name": "Large neutral amino acids transporter small subunit 2",
"gene_name": "slc7a8a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IC31",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IC31"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.26700682",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Whole Genome Sequencing-Based Mapping and Candidate Identification of Mutations from Fixed Zebrafish Tissue.",
"journal": "G3 (Bethesda)",
"date": "2017",
"authors": "Sanchez Nicholas E, Harty Breanne L, O'Reilly-Pol Thomas, Ackerman Sarah D, Herbert Amy L, Holmgren Melanie, Johnson Stephen L, Gray Ryan S, Monk Kelly R",
"reference": {
"type": "PubMed",
"id": "28855284",
"url": "https://pubmed.ncbi.nlm.nih.gov/28855284"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IC31-1",
"protein_name": "A-kinase anchor protein 12b isoform 1",
"gene_name": "akap12b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB13A7S8-1",
"protein_name": "T cell activation RhoGTPase activating protein b isoform 1",
"gene_name": "tagapb",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F1RC23-1",
"protein_name": "non-specific serine/threonine protein kinase",
"gene_name": "ttbk2b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q5TZ72-1",
"protein_name": "Phosphoribosylformylglycinamidine synthase",
"gene_name": "pfas",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M2B7M4-1",
"protein_name": "Transcription factor HIVEP2a isoform X1",
"gene_name": "hivep2a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IC31",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IC31"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.28855284",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 5
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Akap12beta supports asymmetric heart development via modulating the Kupffer's vesicle formation in zebrafish.",
"journal": "BMB Rep.",
"date": "2019",
"authors": "Kim Jeong-Gyun, Kim Hyun-Ho, Bae Sung-Jin",
"reference": {
"type": "PubMed",
"id": "31383248",
"url": "https://pubmed.ncbi.nlm.nih.gov/31383248"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IC31-1",
"protein_name": "A-kinase anchor protein 12b isoform 1",
"gene_name": "akap12b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IC31",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IC31"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.31383248",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Ninjurin1 regulates striated muscle growth and differentiation.",
"journal": "PloS one",
"date": "2019",
"authors": "Kny M, Csalyi KD, Klaeske K, Busch K, Meyer AM, Merks AM, Darm K, Dworatzek E, Fliegner D, Baczko I, Regitz-Zagrosek V, Butter C, Luft FC, Panakova D, Fielitz J",
"reference": {
"type": "PubMed",
"id": "31091274",
"url": "https://pubmed.ncbi.nlm.nih.gov/31091274"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IDX9-1",
"protein_name": "Ninjurin-1",
"gene_name": "ninj1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "O70131-1",
"protein_name": "Ninjurin-1",
"gene_name": "Ninj1",
"tax_name": "Mouse"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IDX9",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IDX9"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.31091274",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Mutations in CCDC11, which encodes a coiled-coil containing ciliary protein, causes situs inversus due to dysmotility of monocilia in the left-right organizer.",
"journal": "Human mutation",
"date": "2015",
"authors": "Narasimhan V, Hjeij R, Vij S, Loges NT, Wallmeier J, Koerner-Rettberg C, Werner C, Thamilselvam SK, Boey A, Choksi SP, Pennekamp P, Roy S, Omran H",
"reference": {
"type": "PubMed",
"id": "25504577",
"url": "https://pubmed.ncbi.nlm.nih.gov/25504577"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IFG5-1",
"protein_name": "Cilia- and flagella-associated protein 53",
"gene_name": "cfap53",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q96M91-1",
"protein_name": "Cilia- and flagella-associated protein 53",
"gene_name": "CFAP53",
"tax_name": "Human"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IFG5",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IFG5"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.25504577",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "A Zebrafish Loss-of-Function Model for Human CFAP53 Mutations Reveals Its Specific Role in Laterality Organ Function.",
"journal": "Human mutation",
"date": "2016",
"authors": "Noel ES, Momenah TS, Al-Dagriri K, Al-Suwaid A, Al-Shahrani S, Jiang H, Willekers S, Oostveen YY, Chocron S, Postma AV, Bhuiyan ZA, Bakkers J",
"reference": {
"type": "PubMed",
"id": "26531781",
"url": "https://pubmed.ncbi.nlm.nih.gov/26531781"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IFG5-1",
"protein_name": "Cilia- and flagella-associated protein 53",
"gene_name": "cfap53",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q96M91-1",
"protein_name": "Cilia- and flagella-associated protein 53",
"gene_name": "CFAP53",
"tax_name": "Human"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IFG5",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IFG5"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.26531781",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Identification and functional characterization of zebrafish K(2P)10.1 (TREK2) two-pore-domain K(+) channels.",
"journal": "Biochim. Biophys. Acta",
"date": "2012",
"authors": "Gierten Jakob, Hassel David, Schweizer Patrick A, Becker R\u00fcdiger, Katus Hugo A, Thomas Dierk",
"reference": {
"type": "PubMed",
"id": "21963410",
"url": "https://pubmed.ncbi.nlm.nih.gov/21963410"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "B8A573-1",
"protein_name": "Potassium channel subfamily K member",
"gene_name": "kcnk1b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB13A8M1-1",
"protein_name": "Potassium channel, subfamily K, member 7",
"gene_name": "kcnk7",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N7Z0-1",
"protein_name": "Potassium channel subfamily K member 5a",
"gene_name": "kcnk5a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N7B3-1",
"protein_name": "Potassium channel subfamily K member",
"gene_name": "kcnk6",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1NHJ6-1",
"protein_name": "Potassium channel subfamily K member 9",
"gene_name": "kcnk9",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q5TZ59-1",
"protein_name": "Potassium channel subfamily K member",
"gene_name": "kcnk3a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "B8A573",
"url": "https://www.uniprot.org/uniprotkb/B8A573"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.21963410",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 6
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "The two-pore domain potassium channel, TWIK-1, has a role in the regulation of heart rate and atrial size.",
"journal": "J. Mol. Cell. Cardiol.",
"date": "2016",
"authors": "Christensen AH, Chatelain FC, Huttner IG, Olesen MS, Soka M, Feliciangeli S, Horvat C, Santiago CF, Vandenberg JI, Schmitt N, Olesen SP, Lesage F, Fatkin D",
"reference": {
"type": "PubMed",
"id": "27103460",
"url": "https://pubmed.ncbi.nlm.nih.gov/27103460"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "B8A573-1",
"protein_name": "Potassium channel subfamily K member",
"gene_name": "kcnk1b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "B8A573",
"url": "https://www.uniprot.org/uniprotkb/B8A573"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.27103460",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Atrium-specific ion channels in the zebrafish-A role of IKACh in atrial repolarization.",
"journal": "Acta Physiol.",
"date": "2018",
"authors": "Skarsfeldt M A, Bomholtz S H, Lundegaard P R, Lopez-Izquierdo A, Tristani-Firouzi M, Bentzen B H",
"reference": {
"type": "PubMed",
"id": "29412518",
"url": "https://pubmed.ncbi.nlm.nih.gov/29412518"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "B8A573-1",
"protein_name": "Potassium channel subfamily K member",
"gene_name": "kcnk1b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1NHJ6-1",
"protein_name": "Potassium channel subfamily K member 9",
"gene_name": "kcnk9",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q5TZ59-1",
"protein_name": "Potassium channel subfamily K member",
"gene_name": "kcnk3a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M2BE84-1",
"protein_name": "Small conductance calcium-activated potassium channel protein 1b isoform X1",
"gene_name": "kcnn1b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M2BIK5-1",
"protein_name": "Small conductance calcium-activated potassium channel protein 1a isoform X1",
"gene_name": "kcnn1a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "B8A573",
"url": "https://www.uniprot.org/uniprotkb/B8A573"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.29412518",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 5
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "The metalloproteinase inhibitor Reck is essential for zebrafish DRG development.",
"journal": "Development",
"date": "2012",
"authors": "Prendergast Andrew, Linbo Tor H, Swarts Tanya, Ungos Josette M, McGraw Hillary F, Krispin Shlomo, Weinstein Brant M, Raible David W",
"reference": {
"type": "PubMed",
"id": "22296847",
"url": "https://pubmed.ncbi.nlm.nih.gov/22296847"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IKU3-1",
"protein_name": "Reversion-inducing cysteine-rich protein with Kazal motifs",
"gene_name": "reck",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IKU3",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IKU3"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.22296847",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Mmp17b is essential for proper neural crest cell migration in vivo.",
"journal": "PLoS ONE",
"date": "2013",
"authors": "Leigh Noah R, Schupp Marcus-Oliver, Li Keguo, Padmanabhan Vakeel, Gastonguay Adam, Wang Ling, Chun Chang Z, Wilkinson George A, Ramchandran Ramani",
"reference": {
"type": "PubMed",
"id": "24098510",
"url": "https://pubmed.ncbi.nlm.nih.gov/24098510"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IKU3-1",
"protein_name": "Reversion-inducing cysteine-rich protein with Kazal motifs",
"gene_name": "reck",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A0R4IB00-1",
"protein_name": "Matrix metalloproteinase-17b isoform 1 precursor",
"gene_name": "mmp17b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IKU3",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IKU3"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.24098510",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Reck enables cerebrovascular development by promoting canonical Wnt signaling.",
"journal": "Development (Cambridge, England)",
"date": "2016-01-01",
"authors": "Ulrich Florian, Carretero-Ortega Jorge, Men\u00e9ndez Javier, Narvaez Carlos, Sun Belinda, Lancaster Eva, Pershad Valerie, Trzaska Sean, V\u00e9liz Evelyn, Kamei Makoto, Prendergast Andrew, Kidd Kameha R, Shaw Kenna M, Castranova Daniel A, Pham Van N, Lo Brigid D, Martin Benjamin L, Raible David W, Weinstein Brant M, Torres-V\u00e1zquez Jes\u00fas",
"reference": {
"type": "PubMed",
"id": "26657775",
"url": "https://pubmed.ncbi.nlm.nih.gov/26657775"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IKU3-1",
"protein_name": "Reversion-inducing cysteine-rich protein with Kazal motifs",
"gene_name": "reck",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IKU3",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IKU3"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"mutagenesis": [
{
"start_pos": 254,
"end_pos": 254,
"sequence_org": "C",
"sequence_mut": "Y",
"comment": "In no food for thought mutant (nft); lethality caused by the absence of most of the intracerebral central arteries. Defects are caused by impaired Wnt signaling.",
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IKU3",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IKU3"
},
{
"database": "PubMed",
"id": "26657775",
"url": "https://pubmed.ncbi.nlm.nih.gov/26657775"
}
],
"uniprot_canonical_ac": "A0A0R4IKU3-1"
}
],
"record_id": "pubmed.26657775",
"abstract": "",
"glycosylation": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Molecular insights into Adgra2/Gpr124 and Reck intracellular trafficking.",
"journal": "Biol. Open",
"date": "2016",
"authors": "Bostaille Naguissa, Gauquier Anne, Twyffels Laure, Vanhollebeke Benoit",
"reference": {
"type": "PubMed",
"id": "27979830",
"url": "https://pubmed.ncbi.nlm.nih.gov/27979830"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IKU3-1",
"protein_name": "Reversion-inducing cysteine-rich protein with Kazal motifs",
"gene_name": "reck",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "E7FBY6-1",
"protein_name": "Adhesion G protein-coupled receptor A2",
"gene_name": "adgra2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IKU3",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IKU3"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"mutagenesis": [
{
"start_pos": 126,
"end_pos": 149,
"sequence_org": "DLSSNRIGCLTPEMFQGLTNLTKL",
"sequence_mut": "",
"comment": "In ouchless mutant; cerebrovascular defects characterized by impaired dorsal root ganglia formation in larvae. Defects are caused by accumulation of the protein in the endoplasmic reticulum and inability to reach the plasma membrane.",
"evidence": [
{
"database": "UniProtKB",
"id": "E7FBY6",
"url": "https://www.uniprot.org/uniprotkb/E7FBY6"
},
{
"database": "PubMed",
"id": "27979830",
"url": "https://pubmed.ncbi.nlm.nih.gov/27979830"
},
{
"database": "PubMed",
"id": "27979884",
"url": "https://pubmed.ncbi.nlm.nih.gov/27979884"
}
],
"uniprot_canonical_ac": "E7FBY6-1"
}
],
"record_id": "pubmed.27979830",
"abstract": "",
"glycosylation": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Identification of RECK as an evolutionarily conserved tumor suppressor gene for zebrafish malignant peripheral nerve sheath tumors.",
"journal": "Oncotarget",
"date": "2018",
"authors": "Kumari Rashmi, Silic Martin R, Jones-Hall Yava L, Nin-Velez Alexandra, Yang Jer-Yen, Mittal Suresh K, Zhang GuangJun",
"reference": {
"type": "PubMed",
"id": "29805750",
"url": "https://pubmed.ncbi.nlm.nih.gov/29805750"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IKU3-1",
"protein_name": "Reversion-inducing cysteine-rich protein with Kazal motifs",
"gene_name": "reck",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IKU3",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IKU3"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.29805750",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Development of functional hindbrain oculomotor circuitry independent of both vascularization and neuronal activity in larval zebrafish.",
"journal": "Curr Neurobiol",
"date": "2016",
"authors": "Ulrich Florian, Grove Charlotte, Torres-V\u00e1zquez Jes\u00fas, Baker Robert",
"reference": {
"type": "PubMed",
"id": "30135618",
"url": "https://pubmed.ncbi.nlm.nih.gov/30135618"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IKU3-1",
"protein_name": "Reversion-inducing cysteine-rich protein with Kazal motifs",
"gene_name": "reck",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IKU3",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IKU3"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.30135618",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Sulfamethoxazole induces brain capillaries toxicity in zebrafish by up-regulation of VEGF and chemokine signalling.",
"journal": "Ecotoxicol. Environ. Saf.",
"date": "2022",
"authors": "Xu Yuhang, Luo Lingfei, Chen Jingying",
"reference": {
"type": "PubMed",
"id": "35561544",
"url": "https://pubmed.ncbi.nlm.nih.gov/35561544"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IKU3-1",
"protein_name": "Reversion-inducing cysteine-rich protein with Kazal motifs",
"gene_name": "reck",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IKU3",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IKU3"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.35561544",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Local angiogenic interplay of Vegfc/d and Vegfa controls brain region-specific emergence of fenestrated capillaries.",
"journal": "Elife",
"date": "2023",
"authors": "Parab Sweta, Card Olivia A, Chen Qiyu, America Michelle, Buck Luke D, Quick Rachael E, Horrigan William F, Levkowitz Gil, Vanhollebeke Benoit, Matsuoka Ryota L",
"reference": {
"type": "PubMed",
"id": "37191285",
"url": "https://pubmed.ncbi.nlm.nih.gov/37191285"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4IKU3-1",
"protein_name": "Reversion-inducing cysteine-rich protein with Kazal motifs",
"gene_name": "reck",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4IKU3",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4IKU3"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.37191285",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Assignment of zebrafish genetic linkage groups to chromosomes.",
"journal": "Cytogenet. Genome Res.",
"date": "2006",
"authors": "Phillips R B, Amores A, Morasch M R, Wilson C, Postlethwait J H",
"reference": {
"type": "PubMed",
"id": "16825768",
"url": "https://pubmed.ncbi.nlm.nih.gov/16825768"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A0R4ILA2-1",
"protein_name": "Tyrosine-protein kinase receptor",
"gene_name": "ntrk2b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F6P1M3-1",
"protein_name": "Tyrosine-protein kinase receptor",
"gene_name": "ntrk1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q9PRJ2-1",
"protein_name": "Olfactory receptor",
"gene_name": "or30bt1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A0R4ILA2",
"url": "https://www.uniprot.org/uniprotkb/A0A0R4ILA2"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.16825768",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "The zebrafish as a new model for the in vivo study of Shigella flexneri interaction with phagocytes and bacterial autophagy.",
"journal": "PLoS Pathog.",
"date": "2013",
"authors": "Mostowy Serge, Boucontet Laurent, Mazon Moya Maria J, Sirianni Andrea, Boudinot Pierre, Hollinshead Michael, Cossart Pascale, Herbomel Philippe, Levraud Jean-Pierre, Colucci-Guyon Emma",
"reference": {
"type": "PubMed",
"id": "24039575",
"url": "https://pubmed.ncbi.nlm.nih.gov/24039575"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M9PMV4-1",
"protein_name": "Septin",
"gene_name": "septin15",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1NZC4-1",
"protein_name": "Septin",
"gene_name": "septin7b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M9PMV4",
"url": "https://www.uniprot.org/uniprotkb/A0A8M9PMV4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.24039575",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
}
]