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Biol. Chem.", "date": "1998", "authors": "van Weering D H, Moen T C, Braakman I, Baas P D, Bos J L", "reference": { "type": "PubMed", "id": "9575150", "url": "https://pubmed.ncbi.nlm.nih.gov/9575150" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P07949-1", "protein_name": "Proto-oncogene tyrosine-protein kinase receptor Ret", "gene_name": "RET", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P07949", "url": "https://www.uniprot.org/uniprotkb/P07949" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9575150", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mutational analysis of the RET proto-oncogene in 71 Japanese patients with medullary thyroid carcinoma.", "journal": "J. 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Genet.", "date": "1998", "authors": "Shirahama S, Ogura K, Takami H, Ito K, Tohsen T, Miyauchi A, Nakamura Y", "reference": { "type": "PubMed", "id": "9621513", "url": "https://pubmed.ncbi.nlm.nih.gov/9621513" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P07949-1", "protein_name": "Proto-oncogene tyrosine-protein kinase receptor Ret", "gene_name": "RET", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P07949", "url": "https://www.uniprot.org/uniprotkb/P07949" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9621513", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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Biol.", "date": "2002", "authors": "Ko L, Cardona GR, Henrion-Caude A, Chin WW", "reference": { "type": "PubMed", "id": "11739747", "url": "https://pubmed.ncbi.nlm.nih.gov/11739747" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2W1-1", "protein_name": "Homologous-pairing protein 2 homolog", "gene_name": "PSMC3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q91ZY6-1", "protein_name": "Homologous-pairing protein 2 homolog", "gene_name": "Psmc3ip", "tax_name": "Rat" }, { "uniprot_canonical_ac": "O35047-1", "protein_name": "Homologous-pairing protein 2 homolog", "gene_name": "Psmc3ip", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2W1", "url": "https://www.uniprot.org/uniprotkb/Q9P2W1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11739747", "abstract": "", "glycosylation": [], 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Two novel biallelic mutations in PSMC3IP in a patient affected by premature ovarian insufficiency.", "journal": "Molecular medicine reports", "date": "2022", "authors": "Mei L, Huang L, Huang Y, Wu X, He H, He X, Su Z, Li P", "reference": { "type": "PubMed", "id": "34878148", "url": "https://pubmed.ncbi.nlm.nih.gov/34878148" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2W1-1", "protein_name": "Homologous-pairing protein 2 homolog", "gene_name": "PSMC3IP", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2W1", "url": "https://www.uniprot.org/uniprotkb/Q9P2W1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.34878148", "abstract": 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"authors": "Cherepanov P, Devroe E, Silver PA, Engelman A", "reference": { "type": "PubMed", "id": "15371438", "url": "https://pubmed.ncbi.nlm.nih.gov/15371438" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y3E1-1", "protein_name": "Hepatoma-derived growth factor-related protein 3", "gene_name": "HDGFL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5XXA9-1", "protein_name": "Lens epithelium-derived growth factor", "gene_name": "PSIP1", "tax_name": "Chicken" }, { "uniprot_canonical_ac": "Q5XXA7-1", "protein_name": "Hepatoma-derived growth factor-related protein 2", "gene_name": "hdgfl2", "tax_name": "Zebrafish" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y3E1", "url": "https://www.uniprot.org/uniprotkb/Q9Y3E1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15371438", "abstract": "", "glycosylation": [], 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CA, Bressler J, Schuur M, Smith A, Bis JC, Davies G, Wolf C, Gudnason V, Chibnik LB, Yang Q, deStefano AL, de Quervain DJ, Srikanth V, Lahti J, Grabe HJ, Smith JA, Priebe L, Yu L, Karbalai N, Hayward C, Wilson JF, Campbell H, Petrovic K, Fornage M, Chauhan G, Yeo R, Boxall R, Becker J, Stegle O, Mather KA, Chouraki V, Sun Q, Rose LM, Resnick S, Oldmeadow C, Kirin M, Wright AF, Jonsdottir MK, Au R, Becker A, Amin N, Nalls MA, Turner ST, Kardia SL, Oostra B, Windham G, Coker LH, Zhao W, Knopman DS, Heiss G, Griswold ME, Gottesman RF, Vitart V, Hastie ND, Zgaga L, Rudan I, Polasek O, Holliday EG, Schofield P, Choi SH, Tanaka T, An Y, Perry RT, Kennedy RE, Sale MM, Wang J, Wadley VG, Liewald DC, Ridker PM, Gow AJ, Pattie A, Starr JM, Porteous D, Liu X, Thomson R, Armstrong NJ, Eiriksdottir G, Assareh AA, Kochan NA, Widen E, Palotie A, Hsieh YC, Eriksson JG, Vogler C, van Swieten JC, Shulman JM, Beiser A, Rotter J, Schmidt CO, Hoffmann W, Nothen MM, Ferrucci L, Attia J, Uitterlinden AG, Amouyel P, Dartigues JF, Amieva H, Raikkonen K, Garcia M, Wolf PA, Hofman A, Longstreth WT Jr, Psaty BM, Boerwinkle E, DeJager PL, Sachdev PS, Schmidt R, Breteler MM, Teumer A, Lopez OL, Cichon S, Chasman DI, Grodstein F, Muller-Myhsok B, Tzourio C, Papassotiropoulos A, Bennett DA, Ikram MA, Deary IJ, van Duijn CM, Launer L, Fitzpatrick AL, Seshadri S, Mosley TH Jr", "reference": { "type": "PubMed", "id": "25648963", "url": "https://pubmed.ncbi.nlm.nih.gov/25648963" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y661-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 4", "gene_name": "HS3ST4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y661", "url": "https://www.uniprot.org/uniprotkb/Q9Y661" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25648963", "abstract": "", 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Markedly reduced activity; when associated with E-190; E-204 and C-233.", "evidence": [ { "database": "UniProtKB", "id": "P01584", "url": "https://www.uniprot.org/uniprotkb/P01584" }, { "database": "PubMed", "id": "29030430", "url": "https://pubmed.ncbi.nlm.nih.gov/29030430" } ], "uniprot_canonical_ac": "P01584-1" }, { "start_pos": 179, "end_pos": 179, "sequence_org": "K", "sequence_mut": "E", "comment": "Suppression of integrin binding; when associated with E-181 and K-244. Markedly reduced activity; when associated with E-181; E-190; E-204 and C-233.", "evidence": [ { "database": "UniProtKB", "id": "P01584", "url": "https://www.uniprot.org/uniprotkb/P01584" }, { "database": "PubMed", "id": "29030430", "url": "https://pubmed.ncbi.nlm.nih.gov/29030430" } ], "uniprot_canonical_ac": "P01584-1" }, { "start_pos": 181, "end_pos": 181, "sequence_org": "K", "sequence_mut": "E", "comment": "Suppression of integrin binding; when associated with E-179 and K-244. Markedly reduced activity; when associated with E-179; E-190; E-204 and C-233.", "evidence": [ { "database": "UniProtKB", "id": "P01584", "url": "https://www.uniprot.org/uniprotkb/P01584" }, { "database": "PubMed", "id": "29030430", "url": "https://pubmed.ncbi.nlm.nih.gov/29030430" } ], "uniprot_canonical_ac": "P01584-1" }, { "start_pos": 190, "end_pos": 190, "sequence_org": "K", "sequence_mut": "E", "comment": "Suppression of integrin binding; when associated with K-244. Markedly reduced activity; when associated with E-171; E-204 and C-233. Markedly reduced activity; when associated with E-179; E-181; E-204 and C-233.", "evidence": [ { "database": "UniProtKB", "id": "P01584", "url": "https://www.uniprot.org/uniprotkb/P01584" }, { "database": "PubMed", "id": "29030430", "url": "https://pubmed.ncbi.nlm.nih.gov/29030430" } ], "uniprot_canonical_ac": "P01584-1" }, { "start_pos": 204, "end_pos": 204, "sequence_org": "K", "sequence_mut": "E", "comment": "Suppression of integrin binding; when associated with K-244. Markedly reduced activity; when associated with E-171; E-190 and C-233. Markedly reduced activity; when associated with E-179; E-181; E-190 and C-233.", "evidence": [ { "database": "UniProtKB", "id": "P01584", "url": "https://www.uniprot.org/uniprotkb/P01584" }, { "database": "PubMed", "id": "29030430", "url": "https://pubmed.ncbi.nlm.nih.gov/29030430" } ], "uniprot_canonical_ac": "P01584-1" }, { "start_pos": 221, "end_pos": 221, "sequence_org": "E", "sequence_mut": "K", "comment": "Enhanced integrin binding.", "evidence": [ { "database": "UniProtKB", "id": "P01584", "url": "https://www.uniprot.org/uniprotkb/P01584" }, { "database": "PubMed", "id": "29030430", "url": "https://pubmed.ncbi.nlm.nih.gov/29030430" } ], "uniprot_canonical_ac": "P01584-1" }, { "start_pos": 233, "end_pos": 233, "sequence_org": "F", "sequence_mut": "C", "comment": "No effect on binding to IL1R or on IL1B activity. Markedly reduced activity; when associated with E-171; E-190 and E-204. Markedly reduced activity; when associated with E-179; E-181; E-190 and E-204.", "evidence": [ { "database": "UniProtKB", "id": "P01584", "url": "https://www.uniprot.org/uniprotkb/P01584" }, { "database": "PubMed", "id": "29030430", "url": "https://pubmed.ncbi.nlm.nih.gov/29030430" } ], "uniprot_canonical_ac": "P01584-1" }, { "start_pos": 244, "end_pos": 244, "sequence_org": "E", "sequence_mut": "K", "comment": "Increased affinity for integrin ITGAV:ITGB3. Suppression of integrin binding; when associated with E-171; E-190 or E-204. Suppression of integrin binding; when associated with E-179 and E-181.", "evidence": [ { "database": "UniProtKB", "id": "P01584", "url": "https://www.uniprot.org/uniprotkb/P01584" }, { "database": "PubMed", "id": "29030430", "url": "https://pubmed.ncbi.nlm.nih.gov/29030430" } ], "uniprot_canonical_ac": "P01584-1" } ], "record_id": "pubmed.29030430", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Human interleukin-1 beta gene.", "journal": "Gene", "date": "1987", "authors": "Bensi G, Raugei G, Palla E, Carinci V, Tornese Buonamassa D, Melli M", "reference": { "type": "PubMed", "id": "2954882", "url": "https://pubmed.ncbi.nlm.nih.gov/2954882" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01584-1", "protein_name": "Interleukin-1 beta", "gene_name": "IL1B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01584", "url": "https://www.uniprot.org/uniprotkb/P01584" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2954882", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", 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response to cariogenic bacterial lipoteichoic acid in human dental pulp inflammation.", "journal": "International endodontic journal", "date": "2021", "authors": "Tian XX, Li R, Liu C, Liu F, Yang LJ, Wang SP, Wang CL", "reference": { "type": "PubMed", "id": "33377178", "url": "https://pubmed.ncbi.nlm.nih.gov/33377178" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01584-1", "protein_name": "Interleukin-1 beta", "gene_name": "IL1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49662-1", "protein_name": "Caspase-4", "gene_name": "CASP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P59044-1", "protein_name": "NACHT, LRR and PYD domains-containing protein 6", "gene_name": "NLRP6", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01584", "url": "https://www.uniprot.org/uniprotkb/P01584" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo 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U.S.A.", "date": "2002", "authors": "Jones Brandi C, Logsdon Naomi J, Josephson Kristopher, Cook Jennifer, Barry Peter A, Walter Mark R", "reference": { "type": "PubMed", "id": "12093920", "url": "https://pubmed.ncbi.nlm.nih.gov/12093920" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13651-1", "protein_name": "Interleukin-10 receptor subunit alpha", "gene_name": "IL10RA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13651", "url": "https://www.uniprot.org/uniprotkb/Q13651" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12093920", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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