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Neurosci.", "date": "2004", "authors": "Niell Cristopher M, Meyer Martin P, Smith Stephen J", "reference": { "type": "PubMed", "id": "14758365", "url": "https://pubmed.ncbi.nlm.nih.gov/14758365" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6R005-1", "protein_name": "Disks large homolog 4", "gene_name": "dlg4", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q6R005", "url": "https://www.uniprot.org/uniprotkb/Q6R005" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.14758365", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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activation and angiogenesis by a mechanism involving integrin \u03b1v\u03b2\u2083.", "journal": "Blood", "date": "2011-08-18", "authors": "Lakshmikanthan Sribalaji, Sobczak Magdalena, Chun Changzoon, Henschel Angela, Dargatz Jillian, Ramchandran Ramani, Chrzanowska-Wodnicka Magdalena", "reference": { "type": "PubMed", "id": "21636859", "url": "https://pubmed.ncbi.nlm.nih.gov/21636859" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6TEN1-1", "protein_name": "Ras-related protein Rap-1b", "gene_name": "rap1b", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q6TEN1", "url": "https://www.uniprot.org/uniprotkb/Q6TEN1" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.21636859", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": 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Genet.", "date": "2005", "authors": "Nixon Susan J, Wegner Jeremy, Ferguson Charles, M\u00e9ry Pierre-Fran\u00e7ois, Hancock John F, Currie Peter D, Key Brian, Westerfield Monte, Parton Robert G", "reference": { "type": "PubMed", "id": "15888488", "url": "https://pubmed.ncbi.nlm.nih.gov/15888488" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6YLH9-1", "protein_name": "Caveolin", "gene_name": "cav1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q6YLH9", "url": "https://www.uniprot.org/uniprotkb/Q6YLH9" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.15888488", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Caveolin-1alpha and -1beta perform nonredundant roles in early vertebrate development.", "journal": "Am. 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Pathol.", "date": "2006", "authors": "Fang Ping-Ke, Solomon Keith R, Zhuang Liyan, Qi Maosong, McKee Mary, Freeman Michael R, Yelick Pamela C", "reference": { "type": "PubMed", "id": "17148682", "url": "https://pubmed.ncbi.nlm.nih.gov/17148682" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6YLH9-1", "protein_name": "Caveolin", "gene_name": "cav1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q6YLH9", "url": "https://www.uniprot.org/uniprotkb/Q6YLH9" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.17148682", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Caveolin-1 is required for lateral line neuromast and notochord development.", "journal": "J. 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[] } ] }, { "title": "Selective Cdk9 inhibition resolves neutrophilic inflammation and enhances cardiac regeneration in larval zebrafish.", "journal": "Development (Cambridge, England)", "date": "2022-04-15", "authors": "Kaveh Aryan, Bruton Finnius A, Oremek Magdalena E M, Tucker Carl S, Taylor Jonathan M, Mullins John J, Rossi Adriano G, Denvir Martin A", "reference": { "type": "PubMed", "id": "34523672", "url": "https://pubmed.ncbi.nlm.nih.gov/34523672" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7SXE8-1", "protein_name": "Cyclin-dependent kinase 9", "gene_name": "cdk9", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q7SXE8", "url": "https://www.uniprot.org/uniprotkb/Q7SXE8" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.34523672", "abstract": "", "glycosylation": [], "mutagenesis": 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Ropers HH, Gecz J, Schuelke M, Laumonnier F, Kalscheuer VM", "reference": { "type": "PubMed", "id": "23623388", "url": "https://pubmed.ncbi.nlm.nih.gov/23623388" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7T3I0-1", "protein_name": "Zinc finger C4H2 domain-containing protein", "gene_name": "zc4h2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q68FG0-1", "protein_name": "Zinc finger C4H2 domain-containing protein", "gene_name": "Zc4h2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NQZ6-1", "protein_name": "Zinc finger C4H2 domain-containing protein", "gene_name": "ZC4H2", "tax_name": "Human" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q7T3I0", "url": "https://www.uniprot.org/uniprotkb/Q7T3I0" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.23623388", "abstract": "", "glycosylation": [], 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Reprod.", "date": "2003", "authors": "Wu X, Wang P, Brown CA, Zilinski CA, Matzuk MM", "reference": { "type": "PubMed", "id": "12773403", "url": "https://pubmed.ncbi.nlm.nih.gov/12773403" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7T3T8-1", "protein_name": "Zygote arrest protein 1", "gene_name": "zar1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q80SU3-1", "protein_name": "Zygote arrest protein 1", "gene_name": "Zar1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TSX9-1", "protein_name": "Zygote arrest protein 1", "gene_name": "Zar1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q86SH2-1", "protein_name": "Zygote arrest protein 1", "gene_name": "ZAR1", "tax_name": "Human" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q7T3T8", "url": "https://www.uniprot.org/uniprotkb/Q7T3T8" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.12773403", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } 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Yue, Cheng Feng, Fang Junshun, Zhou Fang, Ma Weirui, Jiang Yan, Huang Xiahe, Wang Yingchun, Shan Lingjuan, Chen Dahua, Zhang Jian", "reference": { "type": "PubMed", "id": "27913641", "url": "https://pubmed.ncbi.nlm.nih.gov/27913641" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7T3T8-1", "protein_name": "Zygote arrest protein 1", "gene_name": "zar1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1PLH2-1", "protein_name": "Zona pellucida protein AX 1 precursor", "gene_name": "zpax1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1R4N4-1", "protein_name": "Zona pellucida protein AX 4 precursor", "gene_name": "zpax4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AB40ED81-1", "protein_name": "Zona pellucida glycoprotein 3f, tandem duplicate 1 precursor", "gene_name": "zp3f.1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q7T3T8", "url": 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"sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Evolutionary conserved role of ptf1a in the specification of exocrine pancreatic fates.", "journal": "Developmental biology", "date": "2004-04-01", "authors": "Zecchin Elisabetta, Mavropoulos Anastasia, Devos Nathalie, Filippi Alida, Tiso Natascia, Meyer Dirk, Peers Bernard, Bortolussi Marino, Argenton Francesco", "reference": { "type": "PubMed", "id": "15031114", "url": "https://pubmed.ncbi.nlm.nih.gov/15031114" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7ZSX3-1", "protein_name": "Pancreas transcription factor 1 subunit alpha", "gene_name": "ptf1a", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q7ZSX3", "url": "https://www.uniprot.org/uniprotkb/Q7ZSX3" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.15031114", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Differential requirement for ptf1a in endocrine and exocrine lineages of developing zebrafish pancreas.", "journal": "Developmental biology", "date": "2004-06-15", "authors": "Lin John W, Biankin Andrew V, Horb Marko E, Ghosh Bidyut, Prasad Nijaguna B, Yee Nelson S, Pack Michael A, Leach Steven D", "reference": { "type": "PubMed", "id": "15183727", "url": 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Notch inhibits Ptf1 function and acinar cell differentiation in developing mouse and zebrafish pancreas.", "journal": "Development (Cambridge, England)", "date": "2004-09", "authors": "Esni Farzad, Ghosh Bidyut, Biankin Andrew V, Lin John W, Albert Megan A, Yu Xiaobing, MacDonald Raymond J, Civin Curt I, Real Francisco X, Pack Michael A, Ball Douglas W, Leach Steven D", "reference": { "type": "PubMed", "id": "15280211", "url": "https://pubmed.ncbi.nlm.nih.gov/15280211" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7ZSX3-1", "protein_name": "Pancreas transcription factor 1 subunit alpha", "gene_name": "ptf1a", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q7ZSX3", "url": "https://www.uniprot.org/uniprotkb/Q7ZSX3" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.15280211", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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Sciences of the United States of America", "date": "2006-04-25", "authors": "Covassin L D, Villefranc J A, Kacergis M C, Weinstein B M, Lawson N D", "reference": { "type": "PubMed", "id": "16617120", "url": "https://pubmed.ncbi.nlm.nih.gov/16617120" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8AXB3-1", "protein_name": "Vascular endothelial growth factor receptor kdr-like", "gene_name": "kdrl", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5MD89-1", "protein_name": "Vascular endothelial growth factor receptor 3", "gene_name": "flt4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5GIT4-1", "protein_name": "Vascular endothelial growth factor receptor 2", "gene_name": "kdr", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q8AXB3", "url": "https://www.uniprot.org/uniprotkb/Q8AXB3" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", 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Biol.", "date": "1998", "authors": "Thompson M A, Ransom D G, Pratt S J, MacLennan H, Kieran M W, Detrich H W, Vail B, Huber T L, Paw B, Brownlie A J, Oates A C, Fritz A, Gates M A, Amores A, Bahary N, Talbot W S, Her H, Beier D R, Postlethwait J H, Zon L I", "reference": { "type": "PubMed", "id": "9630750", "url": "https://pubmed.ncbi.nlm.nih.gov/9630750" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8AXB3-1", "protein_name": "Vascular endothelial growth factor receptor kdr-like", "gene_name": "kdrl", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9PTJ3-1", "protein_name": "Rhombotin-2", "gene_name": "lmo2", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q8AXB3", "url": "https://www.uniprot.org/uniprotkb/Q8AXB3" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.9630750", "abstract": 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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Biotechnol.", "date": "2006", "authors": "Liu Jing, Sun Yong-Hua, Wang Na, Wang Ya-Ping, Zhu Zuo-Yan", "reference": { "type": "PubMed", "id": "16729214", "url": "https://pubmed.ncbi.nlm.nih.gov/16729214" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8JHF2-1", "protein_name": "Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe", "gene_name": "lfng", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q8JHF2", "url": "https://www.uniprot.org/uniprotkb/Q8JHF2" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.16729214", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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"taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q8JHF4", "url": "https://www.uniprot.org/uniprotkb/Q8JHF4" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "mutagenesis": [ { "start_pos": 303, "end_pos": 303, "sequence_org": "I", "sequence_mut": "D", "comment": "In m227; recessive, larval lethal/Disrupts all retinal layers.", "evidence": [ { "database": "UniProtKB", "id": "Q8JHF4", "url": "https://www.uniprot.org/uniprotkb/Q8JHF4" }, { "database": "PubMed", "id": "11992120", "url": "https://pubmed.ncbi.nlm.nih.gov/11992120" } ], "uniprot_canonical_ac": "Q8JHF4-1" } ], "record_id": "pubmed.11992120", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Coordinated assembly and release of adhesions builds apical junctional belts during de novo polarisation of an epithelial tube.", "journal": "Development (Cambridge, England)", "date": "2020-12-23", "authors": "Symonds Andrew C, Buckley Clare E, Williams Charlotte A, Clarke Jonathan D W", "reference": { "type": "PubMed", "id": "33361092", "url": "https://pubmed.ncbi.nlm.nih.gov/33361092" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8JHF4-1", "protein_name": "Protein PALS1", "gene_name": "pals1a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AB13A9K4-1", "protein_name": "Par-3 family cell polarity regulator alpha, b isoform 1", "gene_name": "pard3ab", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q8JHF4", "url": "https://www.uniprot.org/uniprotkb/Q8JHF4" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.33361092", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], 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functions of the Joubert syndrome protein Arl13b/Scorpion.", "journal": "Development (Cambridge, England)", "date": "2009-12", "authors": "Duldulao Neil A, Lee Sunjin, Sun Zhaoxia", "reference": { "type": "PubMed", "id": "19906870", "url": "https://pubmed.ncbi.nlm.nih.gov/19906870" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8JHI3-1", "protein_name": "ADP-ribosylation factor-like protein 13B", "gene_name": "arl13b", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q8JHI3", "url": "https://www.uniprot.org/uniprotkb/Q8JHI3" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "mutagenesis": [ { "start_pos": 28, "end_pos": 28, "sequence_org": "G", "sequence_mut": "V", "comment": "Abolishes ability to rescue a arl13b mutant when transfected, without affecting localization to cilium.", "evidence": [ { "database": "UniProtKB", "id": "Q8JHI3", "url": "https://www.uniprot.org/uniprotkb/Q8JHI3" }, { "database": "PubMed", "id": "19906870", "url": "https://pubmed.ncbi.nlm.nih.gov/19906870" } ], "uniprot_canonical_ac": "Q8JHI3-1" }, { "start_pos": 35, "end_pos": 35, "sequence_org": "T", "sequence_mut": "N", "comment": "Abolishes ability to rescue a arl13b mutant when transfected, without affecting localization to cilium.", "evidence": [ { "database": "UniProtKB", "id": "Q8JHI3", "url": "https://www.uniprot.org/uniprotkb/Q8JHI3" }, { "database": "PubMed", "id": "19906870", "url": "https://pubmed.ncbi.nlm.nih.gov/19906870" } ], "uniprot_canonical_ac": "Q8JHI3-1" } ], "record_id": "pubmed.19906870", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Zebrafish mutants identify an essential role for laminins in notochord formation.", "journal": "Development", "date": "2002", "authors": "Parsons Michael J, Pollard Steven M, Sa\u00fade Leonor, Feldman Benjamin, Coutinho Pedro, Hirst Elizabeth M A, Stemple Derek L", "reference": { "type": "PubMed", "id": "12070089", "url": "https://pubmed.ncbi.nlm.nih.gov/12070089" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8JHV6-1", "protein_name": "Laminin subunit beta-4", "gene_name": "lamb4", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q1LVF0-1", "protein_name": "Laminin subunit gamma-1", "gene_name": "lamc1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q8JHV6", "url": "https://www.uniprot.org/uniprotkb/Q8JHV6" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.12070089", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Tbx24, encoding a T-box protein, is mutated in the zebrafish somite-segmentation mutant fused somites.", "journal": "Nature genetics", "date": "2002-06", "authors": "Nikaido Masataka, Kawakami Atsushi, Sawada Atsushi, Furutani-Seiki Makoto, Takeda Hiroyuki, Araki Kazuo", "reference": { "type": "PubMed", "id": "12021786", "url": "https://pubmed.ncbi.nlm.nih.gov/12021786" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8JIS6-1", "protein_name": "T-box transcription factor TBX6", "gene_name": "tbx6", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q8JIS6", "url": "https://www.uniprot.org/uniprotkb/Q8JIS6" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.12021786", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cytoglobin: a novel globin type ubiquitously expressed in vertebrate tissues.", "journal": "Mol. Biol. Evol.", "date": "2002", "authors": "Burmester T, Ebner B, Weich B, Hankeln T", "reference": { "type": "PubMed", "id": "11919282", "url": "https://pubmed.ncbi.nlm.nih.gov/11919282" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8UUR3-1", "protein_name": "Cytoglobin-1", "gene_name": "cygb1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8WWM9-1", "protein_name": "Cytoglobin", "gene_name": "CYGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9CX80-1", "protein_name": "Cytoglobin", "gene_name": "Cygb", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NPG2-1", "protein_name": "Neuroglobin", "gene_name": "NGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02144-1", "protein_name": "Myoglobin", "gene_name": "MB", "tax_name": "Human" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q8UUR3", "url": "https://www.uniprot.org/uniprotkb/Q8UUR3" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.11919282", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Duplicated cytoglobin genes in teleost fishes.", "journal": "Biochem. Biophys. Res. 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