[ { "title": "Developmental timing in Dictyostelium is regulated by the Set1 histone methyltransferase.", "journal": "Developmental biology", "date": "2006-04-15", "authors": "Chubb Jonathan R, Bloomfield Gareth, Xu Qikai, Kaller Markus, Ivens Al, Skelton Jason, Turner Bryan M, Nellen Wolfgang, Shaulsky Gad, Kay Robert R, Bickmore Wendy A, Singer Robert H", "reference": { "type": "PubMed", "id": "16469305", "url": "https://pubmed.ncbi.nlm.nih.gov/16469305" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54HS3-1", "protein_name": "Histone-lysine N-methyltransferase set1", "gene_name": "set1", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55BN9-1", "protein_name": "Histone H3.3 type b", "gene_name": "H3b", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55BP0-1", "protein_name": "Histone H3.3 type c", "gene_name": "H3c", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "O15819-1", "protein_name": "Histone H3.3 type a", "gene_name": "H3a", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54HS3", "url": "https://www.uniprot.org/uniprotkb/Q54HS3" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "mutagenesis": [ { "start_pos": 1425, "end_pos": 1425, "sequence_org": "N", "sequence_mut": "Q", "comment": "Loss of catalytic activity; when associated with Ala-1474.", "evidence": [ { "database": "UniProtKB", "id": "Q54HS3", "url": "https://www.uniprot.org/uniprotkb/Q54HS3" }, { "database": "PubMed", "id": "16469305", "url": "https://pubmed.ncbi.nlm.nih.gov/16469305" } ], "uniprot_canonical_ac": "Q54HS3-1" }, { "start_pos": 1474, "end_pos": 1474, "sequence_org": "C", "sequence_mut": "A", "comment": "Loss of catalytic activity; when associated with Gln-1425.", "evidence": [ { "database": "UniProtKB", "id": "Q54HS3", "url": 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"reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.11179674", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The AP-1 clathrin-adaptor is required for lysosomal enzymes sorting and biogenesis of the contractile vacuole complex in Dictyostelium cells.", "journal": "Molecular biology of the cell", "date": "2003-05", "authors": "Lefkir Yaya, de Chassey Beno\u00eet, Dubois Annick, Bogdanovic Aleksandra, Brady Rebecca J, Destaing Olivier, Bruckert Franz, O'Halloran Theresa J, Cosson Pierre, Letourneur Fran\u00e7ois", "reference": { "type": "PubMed", "id": "12802059", "url": "https://pubmed.ncbi.nlm.nih.gov/12802059" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54HS9-1", "protein_name": "AP-1 complex subunit mu", "gene_name": "apm1", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8I8U2-1", "protein_name": "AP-1 complex subunit gamma", "gene_name": "ap1g1", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54HS9", "url": "https://www.uniprot.org/uniprotkb/Q54HS9" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } 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Gotthardt Daniel, Ozinsky Adrian, Cornillon Sophie, Bruckert Franz, Aderem Alan A, Soldati Thierry, Cosson Pierre, Letourneur Fran\u00e7ois", "reference": { "type": "PubMed", "id": "14617812", "url": "https://pubmed.ncbi.nlm.nih.gov/14617812" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54HS9-1", "protein_name": "AP-1 complex subunit mu", "gene_name": "apm1", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54HS9", "url": "https://www.uniprot.org/uniprotkb/Q54HS9" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.14617812", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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"tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54HY0", "url": "https://www.uniprot.org/uniprotkb/Q54HY0" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.17040207", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Loss of SMEK, a novel, conserved protein, suppresses MEK1 null cell polarity, chemotaxis, and gene expression defects.", "journal": "Molecular and cellular biology", "date": "2005", "authors": "Mendoza MC, Du F, Iranfar N, Tang N, Ma H, Loomis WF, Firtel RA", "reference": { "type": "PubMed", "id": "16107728", "url": "https://pubmed.ncbi.nlm.nih.gov/16107728" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54I18-1", "protein_name": "Suppressor of Mek1", "gene_name": "smkA", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54HD9-1", "protein_name": "Follistatin-like domain-containing protein DDB_G0289517", "gene_name": "DDB_G0289517", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54I18", "url": 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phosphatase 4 coordinate Dictyostelium development and chemotaxis.", "journal": "Molecular and cellular biology", "date": "2007-05", "authors": "Mendoza Michelle C, Booth Ezgi O, Shaulsky Gad, Firtel Richard A", "reference": { "type": "PubMed", "id": "17353263", "url": "https://pubmed.ncbi.nlm.nih.gov/17353263" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54I18-1", "protein_name": "Suppressor of Mek1", "gene_name": "smkA", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9Y0B7-1", "protein_name": "Serine/threonine-protein phosphatase 4 catalytic subunit", "gene_name": "ppp4c", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86IL5-1", "protein_name": "Serine/threonine-protein phosphatase 4 regulatory subunit 2", "gene_name": "ppp4r2", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54I18", "url": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Dictyostelium kinase DPYK3 negatively regulates STATc signaling in cell fate decision.", "journal": "Development, growth & differentiation", "date": "2008-09", "authors": "Lee Nam-Sihk, Rodriguez Marbelys, Kim Bohye, Kim Leung", "reference": { "type": "PubMed", "id": "18657170", "url": "https://pubmed.ncbi.nlm.nih.gov/18657170" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54I36-1", "protein_name": "Dual specificity protein kinase pyk3", "gene_name": "pyk3", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54I36", "url": "https://www.uniprot.org/uniprotkb/Q54I36" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.18657170", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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Cell Sci.", "date": "2001", "authors": "Coates J C, Harwood A J", "reference": { "type": "PubMed", "id": "11792801", "url": "https://pubmed.ncbi.nlm.nih.gov/11792801" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54I71-1", "protein_name": "Protein aardvark", "gene_name": "aarA", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "P42523-1", "protein_name": "Tiger protein C1", "gene_name": "tgrC1", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54I71", "url": "https://www.uniprot.org/uniprotkb/Q54I71" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.11792801", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Loss of the beta-catenin homologue aardvark causes ectopic stalk formation in Dictyostelium.", "journal": "Mech. Dev.", "date": "2002", "authors": "Coates Juliet C, Grimson Mark J, Williams Robin S B, Bergman Wayland, Blanton Richard L, Harwood Adrian J", "reference": { "type": "PubMed", "id": "12128211", "url": "https://pubmed.ncbi.nlm.nih.gov/12128211" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54I71-1", "protein_name": "Protein aardvark", "gene_name": "aarA", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54I71", "url": "https://www.uniprot.org/uniprotkb/Q54I71" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.12128211", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54IL5-1", "protein_name": "UDP-sugar-dependent glycosyltransferase 52", "gene_name": "ugt52", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q06321-1", "protein_name": "Sterol 3-beta-glucosyltransferase", "gene_name": "ATG26", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54IL5", "url": "https://www.uniprot.org/uniprotkb/Q54IL5" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.10224056", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Multiple, non-allelic, intein-coding sequences in eukaryotic RNA polymerase genes.", "journal": "BMC Biol.", "date": "2006", "authors": "Goodwin Timothy J D, Butler Margaret I, Poulter Russell T M", "reference": { "type": "PubMed", "id": "17069655", "url": "https://pubmed.ncbi.nlm.nih.gov/17069655" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54IZ9-1", "protein_name": "DNA-directed RNA polymerase III subunit rpc2", "gene_name": "polr3b", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54IZ9", "url": "https://www.uniprot.org/uniprotkb/Q54IZ9" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.17069655", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functional characterization of intracellular Dictyostelium discoideum P2X receptors.", "journal": "The Journal of biological chemistry", "date": "2009-12-11", "authors": "Ludlow Melanie J, Durai Latha, Ennion Steven J", "reference": { "type": "PubMed", "id": "19833731", "url": "https://pubmed.ncbi.nlm.nih.gov/19833731" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54J33-1", "protein_name": "P2X receptor D", "gene_name": "p2xD", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54JH4-1", "protein_name": "P2X receptor E", "gene_name": "p2xE", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q553Y0-1", "protein_name": "P2X receptor C", "gene_name": "p2xC", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q553Y1-1", "protein_name": "P2X receptor B", "gene_name": "p2xB", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86JM7-1", "protein_name": "P2X receptor A", "gene_name": "p2xA", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54J33", "url": "https://www.uniprot.org/uniprotkb/Q54J33" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.19833731", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Chaperonin 60 and mitochondrial disease in Dictyostelium.", "journal": "J. Muscle Res. Cell Motil.", "date": "2002", "authors": "Kotsifas Martha, Barth Christian, de Lozanne Arturo, Lay Sui T, Fisher Paul R", "reference": { "type": "PubMed", "id": "12952082", "url": "https://pubmed.ncbi.nlm.nih.gov/12952082" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54J97-1", "protein_name": "60 kDa heat shock protein, mitochondrial", "gene_name": "hspA", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54J97", "url": "https://www.uniprot.org/uniprotkb/Q54J97" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.12952082", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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Biol. Evol.", "date": "2005", "authors": "Ponger Lo\u00efc, Li Wen-Hsiung", "reference": { "type": "PubMed", "id": "15689527", "url": "https://pubmed.ncbi.nlm.nih.gov/15689527" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54JH6-1", "protein_name": "DNA (cytosine-5)-methyltransferase", "gene_name": "dnmA", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54JH6", "url": "https://www.uniprot.org/uniprotkb/Q54JH6" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.15689527", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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{ "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Silencing of retrotransposons in Dictyostelium by DNA methylation and RNAi.", "journal": "Nucleic acids research", "date": "2005", "authors": "Kuhlmann Markus, Borisova Branimira E, Kaller Markus, Larsson Pontus, Stach Dirk, Na Jianbo, Eichinger Ludwig, Lyko Frank, Ambros Victor, S\u00f6derbom Fredrik, Hammann Christian, Nellen Wolfgang", "reference": { "type": "PubMed", "id": "16282589", "url": "https://pubmed.ncbi.nlm.nih.gov/16282589" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54JH6-1", "protein_name": "DNA (cytosine-5)-methyltransferase", "gene_name": "dnmA", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54JH6", "url": "https://www.uniprot.org/uniprotkb/Q54JH6" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.16282589", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.16400165", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The P450 oxidoreductase, RedA, controls development beyond the mound stage in Dictyostelium discoideum.", "journal": "BMC Dev. Biol.", "date": "2008", "authors": "Gonzalez-Kristeller Daniela C, Farage Layla, Fiorini Leonardo C, Loomis William F, da Silva Aline M", "reference": { "type": "PubMed", "id": "18218133", "url": "https://pubmed.ncbi.nlm.nih.gov/18218133" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54JL0-1", "protein_name": "NADPH-dependent diflavin oxidoreductase 1", "gene_name": "redC", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CT1-1", "protein_name": "NADPH--cytochrome P450 reductase", "gene_name": "redB", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B10-1", "protein_name": "NADPH oxidoreductase A", "gene_name": "redA", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54JL0", "url": "https://www.uniprot.org/uniprotkb/Q54JL0" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Rac1 GTPases control filopodia formation, cell motility, endocytosis, cytokinesis and development in Dictyostelium.", "journal": "Journal of cell science", "date": "2000-06", "authors": "Dumontier M, H\u00f6cht P, Mintert U, Faix J", "reference": { "type": "PubMed", "id": "10825297", "url": "https://pubmed.ncbi.nlm.nih.gov/10825297" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54K32-1", "protein_name": "Ras GTPase-activating-like protein rgaA", "gene_name": "rgaA", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "P34144-1", "protein_name": "Rho-related protein rac1A", "gene_name": "rac1A", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "P34145-1", "protein_name": "Rho-related protein rac1B", "gene_name": "rac1B", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "P34146-1", "protein_name": "Rho-related protein rac1C", 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rasGTPase activating proteins that controls growth, cytokinesis, and development in Dictyostelium discoideum.", "journal": "FEBS letters", "date": "1996-10-07", "authors": "Faix J, Dittrich W", "reference": { "type": "PubMed", "id": "8830653", "url": "https://pubmed.ncbi.nlm.nih.gov/8830653" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54K32-1", "protein_name": "Ras GTPase-activating-like protein rgaA", "gene_name": "rgaA", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54K32", "url": "https://www.uniprot.org/uniprotkb/Q54K32" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.8830653", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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GTPase-activating-like protein rgaA", "gene_name": "rgaA", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54K32", "url": "https://www.uniprot.org/uniprotkb/Q54K32" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.9056774", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The IQGAP-related protein DGAP1 interacts with Rac and is involved in the modulation of the F-actin cytoskeleton and control of cell motility.", "journal": "Journal of cell science", "date": "1998-10", "authors": "Faix J, Clougherty C, Konzok A, Mintert U, Murphy J, Albrecht R, M\u00fchlbauer B, Kuhlmann J", "reference": { "type": "PubMed", "id": "9739079", "url": "https://pubmed.ncbi.nlm.nih.gov/9739079" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54K32-1", "protein_name": "Ras GTPase-activating-like protein rgaA", "gene_name": "rgaA", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "P34144-1", "protein_name": "Rho-related protein rac1A", "gene_name": "rac1A", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "P34145-1", "protein_name": "Rho-related 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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Gen. Microbiol.", "date": "1992", "authors": "Pamula F, Wheldrake J F", "reference": { "type": "PubMed", "id": "1402793", "url": "https://pubmed.ncbi.nlm.nih.gov/1402793" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54KB7-1", "protein_name": "Glutamate dehydrogenase, mitochondrial", "gene_name": "gluD", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VI3-1", "protein_name": "Glutamate dehydrogenase 2", "gene_name": "glud2", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54KB7", "url": "https://www.uniprot.org/uniprotkb/Q54KB7" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.1402793", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The NAD-dependent glutamate dehydrogenase from Dictyostelium discoideum: purification and properties.", "journal": "Arch. Biochem. Biophys.", "date": "1991", "authors": "Pamula F, Wheldrake J F", "reference": { "type": "PubMed", "id": "1952936", "url": "https://pubmed.ncbi.nlm.nih.gov/1952936" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54KB7-1", "protein_name": "Glutamate dehydrogenase, mitochondrial", "gene_name": "gluD", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VI3-1", "protein_name": "Glutamate dehydrogenase 2", "gene_name": "glud2", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54KB7", "url": "https://www.uniprot.org/uniprotkb/Q54KB7" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.1952936", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Biophys. Acta", "date": "2003", "authors": "Bosgraaf L, Van Haastert PJ", "reference": { "type": "PubMed", "id": "14654223", "url": "https://pubmed.ncbi.nlm.nih.gov/14654223" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54M77-1", "protein_name": "Probable serine/threonine-protein kinase roco8", "gene_name": "roco8", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WS5-1", "protein_name": "Probable serine/threonine-protein kinase roco6", "gene_name": "roco6", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q6XHA5-1", "protein_name": "Probable serine/threonine-protein kinase roco11", "gene_name": "roco11", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q6XHB2-1", "protein_name": "Probable serine/threonine-protein kinase roco4", "gene_name": "roco4", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8SSS9-1", "protein_name": "Probable serine/threonine-protein kinase qkgA", "gene_name": "qkgA-1; qkgA-2", "tax_name": 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IQGAP regulate myosin localization to control epithelial tube morphogenesis in Dictyostelium.", "journal": "Developmental cell", "date": "2012-09-11", "authors": "Dickinson Daniel J, Robinson Douglas N, Nelson W James, Weis William I", "reference": { "type": "PubMed", "id": "22902739", "url": "https://pubmed.ncbi.nlm.nih.gov/22902739" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54MH2-1", "protein_name": "Probable vinculin", "gene_name": "ctnnA", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54MH2", "url": "https://www.uniprot.org/uniprotkb/Q54MH2" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.22902739", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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"reference": { "type": "PubMed", "id": "8986798", "url": "https://pubmed.ncbi.nlm.nih.gov/8986798" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54MY9-1", "protein_name": "Probable serine/threonine-protein kinase mkcA", "gene_name": "mkcA", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q23868-1", "protein_name": "Serine protease/ABC transporter B family protein tagC", "gene_name": "tagC", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q23917-1", "protein_name": "3',5'-cyclic-nucleotide phosphodiesterase regA", "gene_name": "regA", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q27562-1", "protein_name": "Proteasome subunit alpha type-1", "gene_name": "psmA1", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54MY9", "url": "https://www.uniprot.org/uniprotkb/Q54MY9" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.8986798", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { 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Cell Biol.", "date": "2005", "authors": "Schirenbeck Antje, Bretschneider Till, Arasada Rajesh, Schleicher Michael, Faix Jan", "reference": { "type": "PubMed", "id": "15908944", "url": "https://pubmed.ncbi.nlm.nih.gov/15908944" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54N00-1", "protein_name": "Formin-H", "gene_name": "forH", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "P26200-1", "protein_name": "Profilin-2", "gene_name": "proB", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "P34144-1", "protein_name": "Rho-related protein rac1A", "gene_name": "rac1A", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54N00", "url": "https://www.uniprot.org/uniprotkb/Q54N00" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.15908944", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The bundling activity of vasodilator-stimulated phosphoprotein is required for filopodium formation.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2006", "authors": "Schirenbeck Antje, Arasada Rajesh, Bretschneider Till, Stradal Theresia E B, Schleicher Michael, Faix Jan", "reference": { "type": "PubMed", "id": "16675552", "url": "https://pubmed.ncbi.nlm.nih.gov/16675552" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54N00-1", "protein_name": "Formin-H", "gene_name": "forH", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q5TJ65-1", "protein_name": "Protein VASP homolog", "gene_name": "vasp", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54N00", "url": "https://www.uniprot.org/uniprotkb/Q54N00" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "mutagenesis": [ { "start_pos": 264, "end_pos": 285, "sequence_org": "GGGDLMAEVMAKRAKMKAAASQ", "sequence_mut": "", "comment": "Impairs actin bundling and filopodia formation without affecting actin nucleation.", "evidence": [ { "database": "UniProtKB", "id": "Q5TJ65", "url": "https://www.uniprot.org/uniprotkb/Q5TJ65" }, { "database": "PubMed", "id": "16675552", "url": "https://pubmed.ncbi.nlm.nih.gov/16675552" } ], "uniprot_canonical_ac": "Q5TJ65-1" }, { "start_pos": 275, "end_pos": 280, "sequence_org": "KRAKMK", "sequence_mut": "AAAAMA", "comment": "Impairs actin bundling and filopodia formation without affecting actin nucleation.", "evidence": [ { "database": "UniProtKB", "id": "Q5TJ65", "url": "https://www.uniprot.org/uniprotkb/Q5TJ65" }, { "database": "PubMed", "id": "16675552", "url": "https://pubmed.ncbi.nlm.nih.gov/16675552" } ], "uniprot_canonical_ac": "Q5TJ65-1" } ], "record_id": "pubmed.16675552", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Loss of Dictyostelium ATG9 results in a pleiotropic phenotype affecting growth, development, phagocytosis and clearance and replication of Legionella pneumophila.", "journal": "Cell. Microbiol.", "date": "2010", "authors": "Tung Sze Man, Unal Can, Ley Alexandra, Pe\u00f1a Cohue, Tunggal Budi, Noegel Angelika A, Krut Oleg, Steinert Michael, Eichinger Ludwig", "reference": { "type": "PubMed", "id": "20070309", "url": "https://pubmed.ncbi.nlm.nih.gov/20070309" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54NA3-1", "protein_name": "Autophagy-related protein 9", "gene_name": "atg9", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54NA3", "url": "https://www.uniprot.org/uniprotkb/Q54NA3" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.20070309", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { 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J. 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The N-terminus of Dictyostelium Scar interacts with Abi and HSPC300 and is essential for proper regulation and function.", "journal": "Molecular biology of the cell", "date": "2007-05", "authors": "Caracino Diana, Jones Cheryl, Compton Mark, Saxe Charles L", "reference": { "type": "PubMed", "id": "17314411", "url": "https://pubmed.ncbi.nlm.nih.gov/17314411" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54NF8-1", "protein_name": "Protein SCAR", "gene_name": "scrA", 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SCAR, a WASP-related protein, isolated as a suppressor of receptor defects in late Dictyostelium development.", "journal": "The Journal of cell biology", "date": "1998", "authors": "Bear JE, Rawls JF, Saxe CL 3rd", "reference": { "type": "PubMed", "id": "9732292", "url": "https://pubmed.ncbi.nlm.nih.gov/9732292" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54NF8-1", "protein_name": "Protein SCAR", "gene_name": "scrA", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q92558-1", "protein_name": "Actin-binding protein WASF1", "gene_name": "WASF1", "tax_name": "Human" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54NF8", "url": "https://www.uniprot.org/uniprotkb/Q54NF8" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.9732292", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Intermediary purine-metabolizing enzymes from the cytosol of Dictyostelium discoideum monitored by high-performance liquid chromatography.", "journal": "Anal. Biochem.", "date": "1984", "authors": "Jahngen E G, Rossomando E F", "reference": { "type": "PubMed", "id": "6428268", "url": "https://pubmed.ncbi.nlm.nih.gov/6428268" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54NJ8-1", "protein_name": "Hypoxanthine-guanine phosphoribosyltransferase", "gene_name": "hprT", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54NJ8", "url": "https://www.uniprot.org/uniprotkb/Q54NJ8" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.6428268", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Vacuole membrane protein 1 is an endoplasmic reticulum protein required for organelle biogenesis, protein secretion, and development.", "journal": "Molecular biology of the cell", "date": "2008-08", "authors": "Calvo-Garrido Javier, Carilla-Latorre Sergio, L\u00e1zaro-Di\u00e9guez Francisco, Egea Gustavo, Escalante Ricardo", "reference": { "type": "PubMed", "id": "18550798", "url": "https://pubmed.ncbi.nlm.nih.gov/18550798" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": 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} ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functional and molecular identification of novel members of the ubiquitous membrane fusion proteins alpha- and gamma-SNAP (soluble N-ethylmaleimide-sensitive factor-attachment proteins) families in Dictyostelium discoideum.", "journal": "Eur. J. Biochem.", "date": "2000", "authors": "Weidenhaupt M, Bruckert F, Louwagie M, Garin J, Satre M", "reference": { "type": "PubMed", "id": "10727946", "url": "https://pubmed.ncbi.nlm.nih.gov/10727946" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54NP6-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "snpA", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q75JI3-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "nsfA", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9U9R7-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "snpC", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9SPE5-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "GSNAP", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SPE6-1", "protein_name": "Alpha-soluble NSF attachment protein 2", "gene_name": "ALPHA-SNAP2; ASNAP2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54NP6", "url": "https://www.uniprot.org/uniprotkb/Q54NP6" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.10727946", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification and phylogenetic analysis of Dictyostelium discoideum kinesin proteins.", "journal": "BMC Genomics", "date": "2003", "authors": "Kollmar Martin, Gl\u00f6ckner Gernot", "reference": { "type": "PubMed", "id": "14641909", "url": "https://pubmed.ncbi.nlm.nih.gov/14641909" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54NP8-1", "protein_name": "Kinesin-related protein 4", "gene_name": "kif4", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TL0-1", "protein_name": "Kinesin-related protein 7", "gene_name": "kif7", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54UC9-1", "protein_name": "Kinesin-related protein 3", "gene_name": "kif3", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555I8-1", "protein_name": "Kinesin-related protein 9", "gene_name": "kif9", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q6RZZ9-1", "protein_name": "Kinesin-related protein 13", "gene_name": "kif13", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q6S000-1", "protein_name": "Kinesin-related protein 12", "gene_name": "kif12", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q6S001-1", "protein_name": "Kinesin-related protein 11", "gene_name": "kif11", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q6S002-1", "protein_name": "Kinesin-related protein 10", "gene_name": "kif10", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q6S003-1", "protein_name": "Kinesin-related protein 8", "gene_name": "kif8", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q6S004-1", "protein_name": "Kinesin-related protein 6", "gene_name": "kif6", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8T135-1", "protein_name": "Kinesin-related protein 5", "gene_name": "kif5", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9BPU3-1", "protein_name": "Kinesin-related protein 2", "gene_name": "kif2", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9NGQ2-1", "protein_name": "Kinesin-related protein 1", "gene_name": "kif1", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54NP8", "url": "https://www.uniprot.org/uniprotkb/Q54NP8" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.14641909", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 13 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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"table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Disruption of four kinesin genes in dictyostelium.", "journal": "BMC cell biology", "date": "2008-04-22", "authors": "Nag Dilip K, Tikhonenko Irina, Soga Ikko, Koonce Michael P", "reference": { "type": "PubMed", "id": "18430243", "url": "https://pubmed.ncbi.nlm.nih.gov/18430243" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54NP8-1", "protein_name": "Kinesin-related protein 4", "gene_name": "kif4", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q6S002-1", "protein_name": "Kinesin-related protein 10", "gene_name": "kif10", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q6S003-1", "protein_name": "Kinesin-related protein 8", "gene_name": "kif8", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54NP8", "url": "https://www.uniprot.org/uniprotkb/Q54NP8" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.18430243", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A developmentally regulated kinesin-related motor protein from Dictyostelium discoideum.", "journal": "Mol. Biol. Cell", "date": "1998", "authors": "de Hostos E L, McCaffrey G, Sucgang R, Pierce D W, Vale R D", "reference": { "type": "PubMed", "id": "9693369", "url": "https://pubmed.ncbi.nlm.nih.gov/9693369" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54NP8-1", "protein_name": "Kinesin-related protein 4", "gene_name": "kif4", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TL0-1", "protein_name": "Kinesin-related protein 7", "gene_name": "kif7", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54UC9-1", "protein_name": "Kinesin-related protein 3", "gene_name": "kif3", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q6S003-1", "protein_name": "Kinesin-related protein 8", "gene_name": "kif8", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q6S004-1", "protein_name": "Kinesin-related protein 6", "gene_name": "kif6", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9BPU3-1", "protein_name": "Kinesin-related protein 2", "gene_name": "kif2", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54NP8", "url": "https://www.uniprot.org/uniprotkb/Q54NP8" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.9693369", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Dictyostelium LIM domain-containing protein LIM2 is essential for proper chemotaxis and morphogenesis.", "journal": "Molecular biology of the cell", "date": "2000-04", "authors": "Chien S, Chung C Y, Sukumaran S, Osborne N, Lee S, Ellsworth C, McNally J G, Firtel R A", "reference": { "type": "PubMed", "id": "10749929", "url": "https://pubmed.ncbi.nlm.nih.gov/10749929" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54NW4-1", "protein_name": "LIM domain-containing protein B", "gene_name": "limB", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54NW4", "url": "https://www.uniprot.org/uniprotkb/Q54NW4" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.10749929", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Paxillin is required for cell-substrate adhesion, cell sorting and slug migration during Dictyostelium development.", "journal": "Journal of cell science", "date": "2005-09-15", "authors": "Bukharova Tanya, Bukahrova Tanya, Weijer Gertrud, Bosgraaf Leonard, Dormann Dirk, van Haastert Peter J, Weijer Cornelis J", "reference": { "type": "PubMed", "id": "16155255", "url": "https://pubmed.ncbi.nlm.nih.gov/16155255" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54NW4-1", "protein_name": "LIM domain-containing protein B", "gene_name": "limB", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8MML5-1", "protein_name": "Paxillin-B", "gene_name": "paxB", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54NW4", "url": "https://www.uniprot.org/uniprotkb/Q54NW4" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.16155255", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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Biol. Cell", "date": "1999", "authors": "Lee S, Parent C A, Insall R, Firtel R A", "reference": { "type": "PubMed", "id": "10473630", "url": "https://pubmed.ncbi.nlm.nih.gov/10473630" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54PQ4-1", "protein_name": "Ras guanine nucleotide exchange factor A", "gene_name": "gefA", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "P15064-1", "protein_name": "Ras-like protein rasG", "gene_name": "rasG", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9Y0C9-1", "protein_name": "Ras-interacting protein RIP3", "gene_name": "ripA", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54PQ4", "url": "https://www.uniprot.org/uniprotkb/Q54PQ4" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.10473630", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Spatial expression patterns of genes involved in cyclic AMP responses in Dictyostelium discoideum development.", "journal": "Dev. Growth Differ.", "date": "2001", "authors": "Tsujioka M, Yokoyama M, Nishio K, Kuwayama H, Morio T, Katoh M, Urushihara H, Saito T, Ochiai H, Tanaka Y, Takeuchi I, Maeda M", "reference": { "type": "PubMed", "id": "11422293", "url": "https://pubmed.ncbi.nlm.nih.gov/11422293" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54PQ4-1", "protein_name": "Ras guanine nucleotide exchange factor A", "gene_name": "gefA", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "P13773-1", "protein_name": "Cyclic AMP receptor 1", "gene_name": "carA-1; carA-2", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q03100-1", "protein_name": "Adenylate cyclase, aggregation specific", "gene_name": "acaA", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54PQ4", "url": "https://www.uniprot.org/uniprotkb/Q54PQ4" } ], "common_name": "Social amoeba", "glygen_name": 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Microarray phenotyping in Dictyostelium reveals a regulon of chemotaxis genes.", "journal": "Bioinformatics (Oxford, England)", "date": "2005-12-15", "authors": "Booth Ezgi O, Van Driessche Nancy, Zhuchenko Olga, Kuspa Adam, Shaulsky Gad", "reference": { "type": "PubMed", "id": "16234315", "url": "https://pubmed.ncbi.nlm.nih.gov/16234315" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54PQ4-1", "protein_name": "Ras guanine nucleotide exchange factor A", "gene_name": "gefA", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86G47-1", "protein_name": "Ras guanine nucleotide exchange factor Q", "gene_name": "gefQ", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8IS18-1", "protein_name": "Ras guanine nucleotide exchange factor E", "gene_name": "gefE", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G0Y8-1", "protein_name": "cGMP-specific 3',5'-cGMP phosphodiesterase 3", "gene_name": "pde3", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "O00899-1", "protein_name": "Ras GTPase-activating-like protein gapA", "gene_name": "gapA", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "O77203-1", "protein_name": "Protein pianissimo A", "gene_name": "piaA", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8IS12-1", "protein_name": "Ras guanine nucleotide exchange factor N", "gene_name": "gefN", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54PQ4", "url": "https://www.uniprot.org/uniprotkb/Q54PQ4" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.16234315", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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biology : CB", "date": "1996-06-01", "authors": "Insall R H, Borleis J, Devreotes P N", "reference": { "type": "PubMed", "id": "8793298", "url": "https://pubmed.ncbi.nlm.nih.gov/8793298" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54PQ4-1", "protein_name": "Ras guanine nucleotide exchange factor A", "gene_name": "gefA", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8SSQ0-1", "protein_name": "Ras guanine nucleotide exchange factor R", "gene_name": "gefR", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54PQ4", "url": "https://www.uniprot.org/uniprotkb/Q54PQ4" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.8793298", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "An orthologue of the Myelin-gene Regulatory Transcription Factor regulates Dictyostelium prestalk differentiation.", "journal": "The International journal of developmental biology", "date": "2012", "authors": "Senoo Hiroshi, Wang Hong-Yu, Araki Tsuyoshi, Williams Jeffrey G, Fukuzawa 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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Cell", "date": "2008", "authors": "Rodriguez Marbelys, Kim Bohye, Lee Nam-Sihk, Veeranki Sudhakar, Kim Leung", "reference": { "type": "PubMed", "id": "18408056", "url": "https://pubmed.ncbi.nlm.nih.gov/18408056" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54QB1-1", "protein_name": "Extracellular signal-regulated kinase 2", "gene_name": "erkB", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CS7-1", "protein_name": "MAP kinase phosphatase with leucine-rich repeats protein 1", "gene_name": "mpl1", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54QB1", "url": "https://www.uniprot.org/uniprotkb/Q54QB1" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.18408056", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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"https://pubmed.ncbi.nlm.nih.gov/7844154" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54QB1-1", "protein_name": "Extracellular signal-regulated kinase 2", "gene_name": "erkB", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54QB1", "url": "https://www.uniprot.org/uniprotkb/Q54QB1" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.7844154", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, 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Cell Sci.", "date": "1998", "authors": "Wang Y, Liu J, Segall J E", "reference": { "type": "PubMed", "id": "9427685", "url": "https://pubmed.ncbi.nlm.nih.gov/9427685" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54QB1-1", "protein_name": "Extracellular signal-regulated kinase 2", "gene_name": "erkB", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54QB1", "url": "https://www.uniprot.org/uniprotkb/Q54QB1" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.9427685", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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"Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54QC8", "url": "https://www.uniprot.org/uniprotkb/Q54QC8" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.17684569", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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Biol. 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{ "database": "PubMed", "id": "12244067", "url": "https://pubmed.ncbi.nlm.nih.gov/12244067" } ], "uniprot_canonical_ac": "Q54QG0-1" }, { "start_pos": 497, "end_pos": 497, "sequence_org": "D", "sequence_mut": "N", "comment": "Slight decrease in Gal-transferase activity.", "evidence": [ { "database": "UniProtKB", "id": "Q54QG0", "url": "https://www.uniprot.org/uniprotkb/Q54QG0" }, { "database": "PubMed", "id": "12244067", "url": "https://pubmed.ncbi.nlm.nih.gov/12244067" } ], "uniprot_canonical_ac": "Q54QG0-1" }, { "start_pos": 509, "end_pos": 509, "sequence_org": "D", "sequence_mut": "N", "comment": "39-60% decrease in both Gal- and Fuc-transferase activities.", "evidence": [ { "database": "UniProtKB", "id": "Q54QG0", "url": "https://www.uniprot.org/uniprotkb/Q54QG0" }, { "database": "PubMed", "id": "12244067", "url": "https://pubmed.ncbi.nlm.nih.gov/12244067" } ], "uniprot_canonical_ac": "Q54QG0-1" }, { "start_pos": 53, "end_pos": 53, "sequence_org": "D", "sequence_mut": "N", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "High-throughput analysis of spatio-temporal dynamics in Dictyostelium.", "journal": "Genome biology", "date": "2007", "authors": "Sawai Satoshi, Guan Xiao-Juan, Kuspa Adam, Cox Edward C", "reference": { "type": "PubMed", "id": "17659086", "url": "https://pubmed.ncbi.nlm.nih.gov/17659086" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54QI2-1", "protein_name": "Serine/threonine-protein kinase DDB_G0283821", "gene_name": "DDB_G0283821", "tax_name": "Social amoeba" }, { 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{ "uniprot_canonical_ac": "Q54B33-1", "protein_name": "Serine/threonine-protein kinase pakE", "gene_name": "pakE", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54QI2", "url": "https://www.uniprot.org/uniprotkb/Q54QI2" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.17659086", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 9 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.15351882", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Phg2, a kinase involved in adhesion and focal site modeling in Dictyostelium.", "journal": "Molecular biology of the cell", "date": "2004-08", "authors": "Gebbie Leigh, Benghezal Mohammed, Cornillon Sophie, Froquet Romain, Cherix Nathalie, Malbouyres Marilyne, Lefkir Yaya, Grangeasse Christophe, Fache S\u00e9bastien, Dalous J\u00e9r\u00e9mie, Br\u00fcckert Franz, Letourneur Fran\u00e7ois, Cosson Pierre", "reference": { "type": "PubMed", "id": "15194808", "url": "https://pubmed.ncbi.nlm.nih.gov/15194808" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54QQ1-1", "protein_name": "Serine/threonine-protein kinase phg2", "gene_name": "phg2", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54QQ1", "url": "https://www.uniprot.org/uniprotkb/Q54QQ1" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.15194808", "abstract": "", 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Cherix Nathalie, Lefkir Yaya, Cosson Pierre, Letourneur Fran\u00e7ois", "reference": { "type": "PubMed", "id": "16325504", "url": "https://pubmed.ncbi.nlm.nih.gov/16325504" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54QQ1-1", "protein_name": "Serine/threonine-protein kinase phg2", "gene_name": "phg2", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54QQ1", "url": "https://www.uniprot.org/uniprotkb/Q54QQ1" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.16325504", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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[] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Dictyostelium CBP3 associates with actin cytoskeleton and is related to slug migration.", 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Dictyostelium.", "journal": "The Journal of biological chemistry", "date": "2001-08-17", "authors": "van Es S, Weening K E, Devreotes P N", "reference": { "type": "PubMed", "id": "11410593", "url": "https://pubmed.ncbi.nlm.nih.gov/11410593" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54QV3-1", "protein_name": "Probable serine/threonine-protein kinase yakA", "gene_name": "yakA", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54QV3", "url": "https://www.uniprot.org/uniprotkb/Q54QV3" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "mutagenesis": [ { "start_pos": 375, "end_pos": 375, "sequence_org": "P", "sequence_mut": "S", "comment": "Causes a temperature-sensitive phenotype, which fails to develop at restrictive temperature.", "evidence": [ { "database": 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"Role for YakA, cAMP, and protein kinase A in regulation of stress responses of Dictyostelium discoideum cells.", "journal": "Molecular biology of the cell", "date": "2002-07", "authors": "Taminato Alexandre, Bagattini Raquel, Gorj\u00e3o Renata, Chen Guokai, Kuspa Adam, Souza Glaucia Mendes", "reference": { "type": "PubMed", "id": "12134067", "url": "https://pubmed.ncbi.nlm.nih.gov/12134067" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54QV3-1", "protein_name": "Probable serine/threonine-protein kinase yakA", "gene_name": "yakA", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54QV3", "url": "https://www.uniprot.org/uniprotkb/Q54QV3" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.12134067", "abstract": "", "glycosylation": [], "mutagenesis": 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pathway that antagonizes multiple chemoattractant responses that regulate directional cell movement.", "journal": "Genes & development", "date": "2004-04-01", "authors": "Brzostowski Joseph A, Parent Carole A, Kimmel Alan R", "reference": { "type": "PubMed", "id": "15059962", "url": "https://pubmed.ncbi.nlm.nih.gov/15059962" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54R41-1", "protein_name": "Guanine nucleotide-binding protein alpha-9 subunit", "gene_name": "gpaI", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54R41", "url": "https://www.uniprot.org/uniprotkb/Q54R41" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.15059962", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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"https://pubmed.ncbi.nlm.nih.gov/9832508" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54R82-1", "protein_name": "Mitogen-activated protein kinase kinase kinase A", "gene_name": "mkkA", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q94490-1", "protein_name": "Ubiquitin conjugating enzyme E2 B", "gene_name": "ubcB", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "O96612-1", "protein_name": "Ubiquitin hydrolase B", "gene_name": "ubpB", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54R82", "url": "https://www.uniprot.org/uniprotkb/Q54R82" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.9832508", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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Biophys. Acta", "date": "2000", "authors": "Dorywalska M, Coukell B, Dharamsi A", "reference": { "type": "PubMed", "id": "10771103", "url": "https://pubmed.ncbi.nlm.nih.gov/10771103" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54RF4-1", "protein_name": "Calcium-binding protein 4a", "gene_name": "cbpD1", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9GYD9-1", "protein_name": "Calcium-binding protein 4b", "gene_name": "cbpD2", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54RF4", "url": "https://www.uniprot.org/uniprotkb/Q54RF4" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.10771103", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Dictyostelium calcium-binding protein 4a interacts with nucleomorphin, a BRCT-domain protein that regulates nuclear number.", "journal": "Biochem. Biophys. Res. Commun.", "date": "2004", "authors": "Myre Michael A, O'Day Danton H", "reference": { "type": "PubMed", "id": "15325281", "url": "https://pubmed.ncbi.nlm.nih.gov/15325281" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54RF4-1", "protein_name": "Calcium-binding protein 4a", "gene_name": "cbpD1", "tax_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9U7C9-1", "protein_name": "Nucleomorphin", "gene_name": "numA", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54RF4", "url": "https://www.uniprot.org/uniprotkb/Q54RF4" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.15325281", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Specificity of a soluble UDP-galactose: fucoside alpha1,3-galactosyltransferase that modifies the cytoplasmic glycoprotein Skp1 in Dictyostelium.", "journal": "The Journal of biological chemistry", "date": "2004-07-09", "authors": "Ketcham Catherine, Wang Fei, Fisher Suzanne Z, Ercan Altan, van der Wel Hanke, Locke Robert D, Sirajud-Doulah K, Matta Khushi L, West Christopher M", "reference": { "type": 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular characterization of a novel UDP-galactose:fucoside alpha3-galactosyltransferase that modifies Skp1 in the cytoplasm of Dictyostelium.", "journal": "The Journal of biological chemistry", "date": "2006-05-05", "authors": "Ercan Altan, Panico Maria, Sutton-Smith Mark, Dell Anne, Morris Howard R, Matta Khushi L, Gay Daniel F, West Christopher M", "reference": { "type": "PubMed", "id": "16495217", "url": "https://pubmed.ncbi.nlm.nih.gov/16495217" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54RP0-1", "protein_name": "UDP-galactose:fucoside alpha-3-galactosyltransferase", "gene_name": "agtA", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54RP0", "url": "https://www.uniprot.org/uniprotkb/Q54RP0" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.16495217", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Multinucleation of the sodC-deficient Dictyostelium discoideum.", "journal": "Biol. Pharm. Bull.", "date": "2003", "authors": "Tsuji Atsushi, Akaza Yuya, Nakamura Shogo, Kodaira Ken-Ichi, Yasukawa Hiro", "reference": { "type": "PubMed", "id": "12913271", "url": "https://pubmed.ncbi.nlm.nih.gov/12913271" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q54RQ1-1", "protein_name": "Extracellular superoxide dismutase [Cu-Zn] 3", "gene_name": "sodC", "tax_name": "Social amoeba" } ], "species": [ { "name": "Dictyostelium discoideum", "taxid": 44689, "evidence": [ { "database": "UniProtKB", "id": "Q54RQ1", "url": "https://www.uniprot.org/uniprotkb/Q54RQ1" } ], "common_name": "Social amoeba", "glygen_name": "Cellular slime mold", "reference_species": "Dictyostelium discoideum [44689]" } ], "record_id": "pubmed.12913271", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]