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Hoffmann GF, Sperl W, Wittig I, Wilichowski E, Schottmann G, Schuelke M, Plecko B, Stephani U, Strom TM, Meitinger T, Prokisch H, Freisinger P", "reference": { "type": "PubMed", "id": "24461907", "url": "https://pubmed.ncbi.nlm.nih.gov/24461907" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96DP5-1", "protein_name": "Methionyl-tRNA formyltransferase, mitochondrial", "gene_name": "MTFMT", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96DP5", "url": "https://www.uniprot.org/uniprotkb/Q96DP5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.24461907", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Cell Sci.", "date": "2005", "authors": "Nishizawa M, Izawa I, Inoko A, Hayashi Y, Nagata K, Yokoyama T, Usukura J, Inagaki M", "reference": { "type": "PubMed", "id": "15731013", "url": "https://pubmed.ncbi.nlm.nih.gov/15731013" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P08779-1", "protein_name": "Keratin, type I cytoskeletal 16", "gene_name": "KRT16", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13647-1", "protein_name": "Keratin, type II cytoskeletal 5", "gene_name": "KRT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3TVW5-1", "protein_name": "Trichoplein keratin filament-binding protein", "gene_name": "Tchp", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P02538-1", "protein_name": "Keratin, type II cytoskeletal 6A", "gene_name": "KRT6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT92-1", "protein_name": "Trichoplein keratin filament-binding protein", "gene_name": "TCHP", "tax_name": "Human" }, { 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Zhou Jiao, Liu Xiaoli, Xiao Mei, Chen Nan, Huang Xiaodan, Chen Hongtao, Pei Xiaofeng, Zhang Hongyu", "reference": { "type": "PubMed", "id": "37315823", "url": "https://pubmed.ncbi.nlm.nih.gov/37315823" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P08779-1", "protein_name": "Keratin, type I cytoskeletal 16", "gene_name": "KRT16", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P08779", "url": "https://www.uniprot.org/uniprotkb/P08779" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.37315823", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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Aging", "date": "2016", "authors": "Hodges Kyndall, Brewer Sheridan S, Labb\u00e9 Catherine, Soto-Ortolaza Alexandra I, Walton Ronald L, Strongosky Audrey J, Uitti Ryan J, van Gerpen Jay A, Ertekin-Taner Nil\u00fcfer, Kantarci Kejal, Lowe Val J, Parisi Joseph E, Savica Rodolfo, Graff-Radford Jonathan, Jones David T, Knopman David S, Petersen Ronald C, Murray Melissa E, Graff-Radford Neill R, Ferman Tanis J, Dickson Dennis W, Wszolek Zbigniew K, Boeve Bradley F, Ross Owen A, Lorenzo-Betancor Oswaldo", "reference": { "type": "PubMed", "id": "27459931", "url": "https://pubmed.ncbi.nlm.nih.gov/27459931" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96DA2", "url": "https://www.uniprot.org/uniprotkb/Q96DA2" } ], "common_name": "Human", "glygen_name": 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model.", "journal": "Human molecular genetics", "date": "2022", "authors": "Mignogna ML, Ficarella R, Gelmini S, Marzulli L, Ponzi E, Gabellone A, Peschechera A, Alessio M, Margari L, Gentile M, D'Adamo P", "reference": { "type": "PubMed", "id": "34761259", "url": "https://pubmed.ncbi.nlm.nih.gov/34761259" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8BHC1-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "Rab39b", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96DA2", "url": "https://www.uniprot.org/uniprotkb/Q96DA2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.34761259", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A new gene family including DSCR1 (Down syndrome candidate region 1) and ZAKI-4: characterization from yeast to human and identification of DSCR1-like 2, a novel human member (DSCR1L2).", "journal": "Genomics", "date": "2000", "authors": "Strippoli P, Lenzi L, Petrini M, Carinci P, Zannotti M", "reference": { "type": "PubMed", "id": "10756093", "url": "https://pubmed.ncbi.nlm.nih.gov/10756093" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UKA8-1", "protein_name": "Calcipressin-3", "gene_name": "RCAN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P36054-1", "protein_name": "Calcipressin-like protein", "gene_name": "RCN1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UKA8", "url": "https://www.uniprot.org/uniprotkb/Q9UKA8" } ], "common_name": "Human", "glygen_name": "Human", 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Proteins encoded by human Down syndrome critical region gene 1-like 2 (DSCR1L2) mRNA and by a novel DSCR1L2 mRNA isoform interact with cardiac troponin I (TNNI3).", "journal": "Gene", "date": "2006", "authors": "Canaider S, Facchin F, Griffoni C, Casadei R, Vitale L, Lenzi L, Frabetti F, D'Addabbo P, Carinci P, Zannotti M, Strippoli P", "reference": { "type": "PubMed", "id": "16516408", "url": "https://pubmed.ncbi.nlm.nih.gov/16516408" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UKA8-1", "protein_name": "Calcipressin-3", "gene_name": "RCAN3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UKA8", "url": "https://www.uniprot.org/uniprotkb/Q9UKA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16516408", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification and analysis of human RCAN3 (DSCR1L2) mRNA and protein isoforms.", "journal": "Gene", "date": "2008", "authors": "Facchin F, Canaider S, Vitale L, Frabetti F, Griffoni C, Lenzi L, Casadei R, Strippoli P", "reference": { "type": "PubMed", "id": "18022329", "url": "https://pubmed.ncbi.nlm.nih.gov/18022329" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UKA8-1", "protein_name": "Calcipressin-3", "gene_name": "RCAN3", "tax_name": "Human" } ], "species": [ { 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Genetic variants in apoptosis and immunoregulation-related genes are associated with risk of chronic lymphocytic leukemia.", "journal": "Cancer research", "date": "2008", "authors": "Enjuanes A, Benavente Y, Bosch F, Martin-Guerrero I, Colomer D, Perez-Alvarez S, Reina O, Ardanaz MT, Jares P, Garcia-Orad A, Pujana MA, Montserrat E, de Sanjose S, Campo E", "reference": { "type": "PubMed", "id": "19074885", "url": "https://pubmed.ncbi.nlm.nih.gov/19074885" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UKA8-1", "protein_name": "Calcipressin-3", "gene_name": "RCAN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75113-1", "protein_name": "NEDD4-binding protein 1", "gene_name": "N4BP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51946-1", "protein_name": "Cyclin-H", "gene_name": "CCNH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86W25-1", "protein_name": "NACHT, LRR and PYD 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Complexity of bidirectional transcription and alternative splicing at human RCAN3 locus.", "journal": "PLoS ONE", "date": "2011", "authors": "Facchin F, Vitale L, Bianconi E, Piva F, Frabetti F, Strippoli P, Casadei R, Pelleri MC, Piovesan A, Canaider S", "reference": { "type": "PubMed", "id": "21961037", "url": "https://pubmed.ncbi.nlm.nih.gov/21961037" }, "referenced_glycans": [], "referenced_proteins": [ { 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Andrea, Sabariego-Navarro Miguel, Bayod Sergi, Padilla Laura, Taco M\u00aa Rosario, Larriba Sara, P\u00e9rez-Riba Merc\u00e8, Serrano-Candelas Eva", "reference": { "type": "PubMed", "id": "35640493", "url": "https://pubmed.ncbi.nlm.nih.gov/35640493" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UKA8-1", "protein_name": "Calcipressin-3", "gene_name": "RCAN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9JKK0-1", "protein_name": "Calcipressin-3", "gene_name": "Rcan3", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UKA8", "url": "https://www.uniprot.org/uniprotkb/Q9UKA8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.35640493", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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phosphorylated C-terminal domain of RNA polymerase II.", "journal": "Mol. Cell. Biol.", "date": "1998", "authors": "Patturajan M, Wei X, Berezney R, Corden J L", "reference": { "type": "PubMed", "id": "9528809", "url": "https://pubmed.ncbi.nlm.nih.gov/9528809" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UPN6-1", "protein_name": "SR-related and CTD-associated factor 8", "gene_name": "SCAF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63623-1", "protein_name": "SR-related and CTD-associated factor 8", "gene_name": "Scaf8", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q6DID3-1", "protein_name": "SR-related and CTD-associated factor 8", "gene_name": "Scaf8", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UPN6", "url": "https://www.uniprot.org/uniprotkb/Q9UPN6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9528809", "abstract": "", "glycosylation": [], 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"uniprot_canonical_ac": "Q12874-1", "protein_name": "Splicing factor 3A subunit 3", "gene_name": "SF3A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15459-1", "protein_name": "Splicing factor 3A subunit 1", "gene_name": "SF3A1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q12874", "url": "https://www.uniprot.org/uniprotkb/Q12874" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 162, "end_pos": 162, "sequence_org": "F", "sequence_mut": "E", "comment": "No effect on binding to SF3A3.", "evidence": [ { "database": "UniProtKB", "id": "Q15459", "url": "https://www.uniprot.org/uniprotkb/Q15459" }, { "database": "PubMed", "id": "17098193", "url": "https://pubmed.ncbi.nlm.nih.gov/17098193" } ], "uniprot_canonical_ac": "Q15459-1" }, { "start_pos": 169, "end_pos": 169, "sequence_org": "L", "sequence_mut": "K", "comment": 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