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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "CLOCK/BMAL1 regulates circadian change of mouse hepatic insulin sensitivity by SIRT1.", "journal": "Hepatology (Baltimore, Md.)", "date": "2014-06", "authors": "Zhou Ben, Zhang Yi, Zhang Fang, Xia Yulei, Liu Jun, Huang Rui, Wang Yuangao, Hu Yanan, Wu Jingxia, Dai Changgui, Wang Hui, Tu Yanyang, Peng Xiaozhong, Wang Yiqian, Zhai Qiwei", "reference": { "type": "PubMed", "id": "24442997", "url": "https://pubmed.ncbi.nlm.nih.gov/24442997" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O08785-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "Clock", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9WTL8-1", "protein_name": "Basic helix-loop-helix ARNT-like protein 1", "gene_name": "Bmal1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": 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"SRC-2 is an essential coactivator for orchestrating metabolism and circadian rhythm.", "journal": "Cell Rep.", "date": "2014", "authors": "Stashi Erin, Lanz Rainer B, Mao Jianqiang, Michailidis George, Zhu Bokai, Kettner Nicole M, Putluri Nagireddy, Reineke Erin L, Reineke Lucas C, Dasgupta Subhamoy, Dean Adam, Stevenson Connor R, Sivasubramanian Natarajan, Sreekumar Arun, Demayo Francesco, York Brian, Fu Loning, O'Malley Bert W", "reference": { "type": "PubMed", "id": "24529706", "url": "https://pubmed.ncbi.nlm.nih.gov/24529706" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O08785-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "Clock", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q61026-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "Ncoa2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9WTL8-1", "protein_name": "Basic helix-loop-helix ARNT-like protein 1", "gene_name": "Bmal1", 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Chem.", "date": "1999", "authors": "Zhang S, Xing H, Muslin A J", "reference": { "type": "PubMed", "id": "10455159", "url": "https://pubmed.ncbi.nlm.nih.gov/10455159" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P63101-1", "protein_name": "14-3-3 protein zeta/delta", "gene_name": "Ywhaz", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q86UE8-1", "protein_name": "Serine/threonine-protein kinase tousled-like 2", "gene_name": "TLK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O55047-1", "protein_name": "Serine/threonine-protein kinase tousled-like 2", "gene_name": "Tlk2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P63104-1", "protein_name": "14-3-3 protein zeta/delta", "gene_name": "YWHAZ", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P63101", "url": "https://www.uniprot.org/uniprotkb/P63101" } ], "common_name": "Mouse", "glygen_name": "Mouse", 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Biophys. Res. Commun.", "date": "2015", "authors": "Yuasa K, Ota R, Matsuda S, Isshiki K, Inoue M, Tsuji A", "reference": { "type": "PubMed", "id": "26047703", "url": "https://pubmed.ncbi.nlm.nih.gov/26047703" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P63101-1", "protein_name": "14-3-3 protein zeta/delta", "gene_name": "Ywhaz", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P62259-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "Ywhae", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O70456-1", "protein_name": "14-3-3 protein sigma", "gene_name": "Sfn", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P61982-1", "protein_name": "14-3-3 protein gamma", "gene_name": "Ywhag", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P68254-1", "protein_name": "14-3-3 protein theta", "gene_name": "Ywhaq", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P68510-1", "protein_name": "14-3-3 protein eta", "gene_name": "Ywhah", "tax_name": "Mouse" }, { 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "14-3-3\u03b6 suppresses RANKL signaling by destabilizing TRAF6.", "journal": "The Journal of biological chemistry", "date": "2024-07", "authors": "Ayyasamy R, Fan S, Czernik P, Lecka-Czernik B, Chattopadhyay S, Chakravarti R", "reference": { "type": "PubMed", "id": "38908751", "url": "https://pubmed.ncbi.nlm.nih.gov/38908751" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P63101-1", "protein_name": "14-3-3 protein zeta/delta", "gene_name": "Ywhaz", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P70196-1", "protein_name": "TNF receptor-associated factor 6", "gene_name": "Traf6", "tax_name": "Mouse" } ], "species": [ { "name": 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "14-3-3 zeta protein binds to the carboxyl half of mouse wee1 kinase.", "journal": "Biochem. Biophys. Res. Commun.", "date": "1997", "authors": "Honda R, Ohba Y, Yasuda H", "reference": { "type": "PubMed", "id": "9016762", "url": "https://pubmed.ncbi.nlm.nih.gov/9016762" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P63101-1", "protein_name": "14-3-3 protein zeta/delta", "gene_name": "Ywhaz", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P47810-1", "protein_name": "Wee1-like protein kinase", "gene_name": "Wee1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P63101", "url": "https://www.uniprot.org/uniprotkb/P63101" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.9016762", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Cdk-like protein PCTAIRE-1 from mouse brain associates with p11 and 14-3-3 proteins.", "journal": "Mol. Gen. Genet.", "date": "1997", "authors": "Sladeczek F, Camonis J H, Burnol A F, Le Bouffant F", "reference": { "type": "PubMed", "id": "9197417", "url": "https://pubmed.ncbi.nlm.nih.gov/9197417" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P63101-1", "protein_name": "14-3-3 protein zeta/delta", "gene_name": "Ywhaz", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P68254-1", "protein_name": "14-3-3 protein theta", "gene_name": "Ywhaq", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P68510-1", "protein_name": "14-3-3 protein eta", "gene_name": "Ywhah", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q04735-1", "protein_name": "Cyclin-dependent kinase 16", "gene_name": "Cdk16", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P63101", "url": "https://www.uniprot.org/uniprotkb/P63101" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus 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Cooper J, Zhang L, Fu H, Hakomori S", "reference": { "type": "PubMed", "id": "9705322", "url": "https://pubmed.ncbi.nlm.nih.gov/9705322" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P63101-1", "protein_name": "14-3-3 protein zeta/delta", "gene_name": "Ywhaz", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P68510-1", "protein_name": "14-3-3 protein eta", "gene_name": "Ywhah", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CQV8-1", "protein_name": "14-3-3 protein beta/alpha", "gene_name": "Ywhab", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P28867-1", "protein_name": "Protein kinase C delta type", "gene_name": "Prkcd", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P63104-1", "protein_name": "14-3-3 protein zeta/delta", "gene_name": "YWHAZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04917-1", "protein_name": "14-3-3 protein eta", "gene_name": "YWHAH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31946-1", "protein_name": 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Pharmacol.", "date": "1994", "authors": "Chen M, Achkar C, Gudas L J", "reference": { "type": "PubMed", "id": "8058062", "url": "https://pubmed.ncbi.nlm.nih.gov/8058062" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P47738-1", "protein_name": "Aldehyde dehydrogenase, mitochondrial", "gene_name": "Aldh2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P47738", "url": "https://www.uniprot.org/uniprotkb/P47738" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.8058062", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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"total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Overexpression of tightly regulated proteins: protein phosphatase 2A overexpression in NIH 3T3 cells.", "journal": "Methods in enzymology", "date": "2002", "authors": "Ram PT", "reference": { "type": "PubMed", "id": "11665638", "url": "https://pubmed.ncbi.nlm.nih.gov/11665638" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q76MZ3-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform", "gene_name": "Ppp2r1a", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q76MZ3", "url": "https://www.uniprot.org/uniprotkb/Q76MZ3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.11665638", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A direct interaction between the N terminus of adenylyl cyclase AC8 and the catalytic subunit of protein phosphatase 2A.", "journal": "Mol. Pharmacol.", "date": "2006", "authors": "Crossthwaite AJ, Ciruela A, Rayner TF, Cooper DM", "reference": { "type": "PubMed", "id": "16258073", "url": "https://pubmed.ncbi.nlm.nih.gov/16258073" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q76MZ3-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform", "gene_name": "Ppp2r1a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P40146-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "Adcy8", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P63330-1", "protein_name": "Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform", "gene_name": "Ppp2ca", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P67775-1", "protein_name": "Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform", "gene_name": "PPP2CA", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q76MZ3", "url": "https://www.uniprot.org/uniprotkb/Q76MZ3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 38, "end_pos": 40, "sequence_org": "WQT", "sequence_mut": "AAA", "comment": "Does not interact with CALM1; when associated with 49-A--A-51. Interacts with PPP2CA; when associated with 49-A--A-51. Greatly reduces CCE-stimulated adenylate cyclase activity; when associated with 49-A--A-51. Does not affect caveolar localization; when associated with 49-A--A-51. Does not affect calcium/calmodulin stimulated adenylate cyclase activity; when associated with 49-A--A-51. Decreases calcium/calmodulin stimulated adenylate cyclase activity; when associated with 49-A--A-51; A-1197; A-1198 and A-1202.", "evidence": [ { "database": "UniProtKB", "id": "P40146", "url": "https://www.uniprot.org/uniprotkb/P40146" }, { "database": "PubMed", "id": "11744699", "url": "https://pubmed.ncbi.nlm.nih.gov/11744699" }, { "database": "PubMed", "id": "16258073", "url": "https://pubmed.ncbi.nlm.nih.gov/16258073" }, { "database": "PubMed", "id": "19305019", "url": "https://pubmed.ncbi.nlm.nih.gov/19305019" } ], "uniprot_canonical_ac": "P40146-1" }, { "start_pos": 49, "end_pos": 51, "sequence_org": "RFI", "sequence_mut": "AAA", "comment": "Does not interact with CALM1; when associated with 38-A--A-40. Interacts with PPP2CA; when associated with 38-A--A-40. Greatly reduces CCE-stimulated adenylate cyclase activity; when associated with 38-A--A-40. Does not affect caveolar localization; when associated with 38-A--A-40. Does not affect calcium/calmodulin stimulated adenylate cyclase activity; when associated with 38-A--A-40. Decreases calcium/calmodulin stimulated adenylate cyclase activity; when associated with 38-A--A-40; A-1197; A-1198 and A-1202.", "evidence": [ { "database": "UniProtKB", "id": "P40146", "url": "https://www.uniprot.org/uniprotkb/P40146" }, { "database": "PubMed", "id": "11744699", "url": "https://pubmed.ncbi.nlm.nih.gov/11744699" }, { "database": "PubMed", "id": "16258073", "url": "https://pubmed.ncbi.nlm.nih.gov/16258073" }, { "database": "PubMed", "id": "19305019", "url": "https://pubmed.ncbi.nlm.nih.gov/19305019" } ], "uniprot_canonical_ac": "P40146-1" } ], "record_id": "pubmed.16258073", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The B55alpha-containing PP2A holoenzyme dephosphorylates FOXO1 in islet beta-cells under oxidative stress.", "journal": "Biochem. J.", "date": "2012", "authors": "Yan Ling, Guo Shuangli, Brault Marie, Harmon Jamie, Robertson R Paul, Hamid Rizwan, Stein Roland, Yang Elizabeth", "reference": { "type": "PubMed", "id": "22417654", "url": "https://pubmed.ncbi.nlm.nih.gov/22417654" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q76MZ3-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform", "gene_name": "Ppp2r1a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9R1E0-1", "protein_name": "Forkhead box protein O1", "gene_name": "Foxo1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q76MZ3", "url": "https://www.uniprot.org/uniprotkb/Q76MZ3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.22417654", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Nuclear accumulation of HDAC4 in ATM deficiency promotes neurodegeneration in ataxia telangiectasia.", "journal": "Nature medicine", "date": "2012", "authors": "Li J, Chen J, Ricupero CL, Hart RP, Schwartz MS, Kusnecov A, Herrup K", "reference": { "type": "PubMed", "id": "22466704", "url": "https://pubmed.ncbi.nlm.nih.gov/22466704" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q76MZ3-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform", "gene_name": "Ppp2r1a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P63151-1", "protein_name": "Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform", "gene_name": "PPP2R2A", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q76MZ3", "url": "https://www.uniprot.org/uniprotkb/Q76MZ3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "phosphorylation": [ { "start_pos": 401, "end_pos": 401, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q76MZ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q76MZ3" }, { "database": "PubMed", "id": "22466704", "url": "https://pubmed.ncbi.nlm.nih.gov/22466704" } ], "site_lbl": "Ser401", "uniprot_canonical_ac": "Q76MZ3-1" }, { "start_pos": 400, "end_pos": 400, "kinase_uniprot_canonical_ac": "Q13315-1", "kinase_gene_name": "ATM", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P63151", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P63151" }, { "database": "PubMed", "id": "22466704", "url": "https://pubmed.ncbi.nlm.nih.gov/22466704" } ], "site_lbl": "Ser400", "uniprot_canonical_ac": "P63151-1" } ], "record_id": "pubmed.22466704", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Phosphatase PP2A is requisite for the function of regulatory T cells.", "journal": "Nature immunology", "date": "2016-05", "authors": "Apostolidis Sokratis A, Rodr\u00edguez-Rodr\u00edguez No\u00e9, Su\u00e1rez-Fueyo Abel, Dioufa Nikolina, Ozcan Esra, Crisp\u00edn Jos\u00e9 C, Tsokos Maria G, Tsokos George C", "reference": { "type": "PubMed", "id": "26974206", "url": "https://pubmed.ncbi.nlm.nih.gov/26974206" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q76MZ3-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform", "gene_name": "Ppp2r1a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P63330-1", "protein_name": "Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform", "gene_name": "Ppp2ca", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q76MZ3", "url": "https://www.uniprot.org/uniprotkb/Q76MZ3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.26974206", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], 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