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J.", "date": "2005", "authors": "Bleve Gianluca, Zacheo Giuseppe, Cappello Maria Stella, Dellaglio Franco, Grieco Francesco", "reference": { "type": "PubMed", "id": "15813700", "url": "https://pubmed.ncbi.nlm.nih.gov/15813700" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53154-1", "protein_name": "Membrane-bound O-acyltransferase GUP1", "gene_name": "GUP1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53154", "url": "https://www.uniprot.org/uniprotkb/P53154" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.15813700", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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Chem.", "date": "2011", "authors": "Pagac Martin, de la Mora Hector Vazquez, Duperrex C\u00e9cile, Roubaty Carole, Vionnet Christine, Conzelmann Andreas", "reference": { "type": "PubMed", "id": "21849510", "url": "https://pubmed.ncbi.nlm.nih.gov/21849510" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53154-1", "protein_name": "Membrane-bound O-acyltransferase GUP1", "gene_name": "GUP1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53154", "url": "https://www.uniprot.org/uniprotkb/P53154" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.21849510", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", 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[] } ] }, { "title": "The yeast mitochondrial pyruvate carrier is a hetero-dimer in its functional state.", "journal": "The EMBO journal", "date": "2019-05-15", "authors": "Tavoulari Sotiria, Thangaratnarajah Chancievan, Mavridou Vasiliki, Harbour Michael E, Martinou Jean-Claude, Kunji Edmund Rs", "reference": { "type": "PubMed", "id": "30979775", "url": "https://pubmed.ncbi.nlm.nih.gov/30979775" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53157-1", "protein_name": "Mitochondrial pyruvate carrier 1", "gene_name": "MPC1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P53311-1", "protein_name": "Mitochondrial pyruvate carrier 3", "gene_name": "MPC3", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P38857-1", "protein_name": "Mitochondrial pyruvate carrier 2", "gene_name": "MPC2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", 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"Saccharomyces cerevisiae MPS2 encodes a membrane protein localized at the spindle pole body and the nuclear envelope.", "journal": "Molecular biology of the cell", "date": "1999-07", "authors": "Mu\u00f1oz-Centeno M C, McBratney S, Monterrosa A, Byers B, Mann C, Winey M", "reference": { "type": "PubMed", "id": "10397772", "url": "https://pubmed.ncbi.nlm.nih.gov/10397772" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53159-1", "protein_name": "Monopolar spindle protein 2", "gene_name": "MPS2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53159", "url": "https://www.uniprot.org/uniprotkb/P53159" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.10397772", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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"protein_name": "Monopolar spindle protein 2", "gene_name": "MPS2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53159", "url": "https://www.uniprot.org/uniprotkb/P53159" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.9060463", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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Lett.", "date": "2006", "authors": "Gan Xiang, Arita Kyoko, Isono Setsuko, Kitakawa Madoka, Yoshino Ken-ichi, Yonezawa Kazuyoshi, Kato Akihiro, Inoue Hirokazu, Isono Katsumi", "reference": { "type": "PubMed", "id": "16451194", "url": "https://pubmed.ncbi.nlm.nih.gov/16451194" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53163-1", "protein_name": "Large ribosomal subunit protein bL12m", "gene_name": "MNP1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53163", "url": "https://www.uniprot.org/uniprotkb/P53163" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.16451194", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": 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Cell", "date": "2004", "authors": "Wu Pei-Yun Jenny, Ruhlmann Christine, Winston Fred, Schultz Patrick", "reference": { "type": "PubMed", "id": "15260971", "url": "https://pubmed.ncbi.nlm.nih.gov/15260971" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53165-1", "protein_name": "SAGA complex subunit SGF73", "gene_name": "SGF73", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q05027-1", "protein_name": "SAGA complex/transcription factor TFIID complex subunit TAF9", "gene_name": "TAF9", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P35177-1", "protein_name": "SAGA complex subunit SPT7", "gene_name": "SPT7", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P38811-1", "protein_name": "SAGA complex/NuA4 acetyltransferase complex subunit TRA1", "gene_name": "TRA1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q03067-1", "protein_name": "SAGA complex subunit SGF11", "gene_name": "SGF11", "tax_name": "Baker's 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[] } ] }, { "title": "Polyglutamine-expanded spinocerebellar ataxia-7 protein disrupts normal SAGA and SLIK histone acetyltransferase activity.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2005-06-14", "authors": "McMahon Stacey J, Pray-Grant Marilyn G, Schieltz David, Yates John R, Grant Patrick A", "reference": { "type": "PubMed", "id": "15932941", "url": "https://pubmed.ncbi.nlm.nih.gov/15932941" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53165-1", "protein_name": "SAGA complex subunit SGF73", "gene_name": "SGF73", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53165", "url": "https://www.uniprot.org/uniprotkb/P53165" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.15932941", 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[] } ] }, { "title": "The nuclear localization of SWI/SNF proteins is subjected to oxygen regulation.", "journal": "Cell Biosci.", "date": "2012", "authors": "Dastidar Ranita Ghosh, Hooda Jagmohan, Shah Ajit, Cao Thai M, Henke Robert Michael, Zhang Li", "reference": { "type": "PubMed", "id": "22932476", "url": "https://pubmed.ncbi.nlm.nih.gov/22932476" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53165-1", "protein_name": "SAGA complex subunit SGF73", "gene_name": "SGF73", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P53255-1", "protein_name": "CWF19-like protein DRN1", "gene_name": "DRN1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P41813-1", "protein_name": "Fork head protein homolog 2", "gene_name": "FKH2", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q03330-1", "protein_name": "Histone acetyltransferase GCN5", "gene_name": "GCN5", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40466-1", 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SAGA deubiquitinating module structure and activity.", "journal": "Journal of molecular biology", "date": "2015-04-24", "authors": "Yan Ming, Wolberger Cynthia", "reference": { "type": "PubMed", "id": "25526805", "url": "https://pubmed.ncbi.nlm.nih.gov/25526805" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53165-1", "protein_name": "SAGA complex subunit SGF73", "gene_name": "SGF73", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53165", "url": "https://www.uniprot.org/uniprotkb/P53165" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.25526805", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", 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temperature.", "journal": "Current genetics", "date": "2001-08", "authors": "de Jesus Ferreira M C, Bao X, Laiz\u00e9 V, Hohmann S", "reference": { "type": "PubMed", "id": "11570514", "url": "https://pubmed.ncbi.nlm.nih.gov/11570514" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53169-1", "protein_name": "YAP1-binding protein 2", "gene_name": "YBP2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53169", "url": "https://www.uniprot.org/uniprotkb/P53169" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.11570514", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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A, Rasmussen Karina J, Andersen Jens R, Johansen Lene E, Hansen Lykke H, Jespersen Hans, Podtelejnikov Alexandre, Nielsen Eva, Crawford Janne, Poulsen Vibeke, S\u00f8rensen Birgitte D, Matthiesen Jesper, Hendrickson Ronald C, Gleeson Frank, Pawson Tony, Moran Michael F, Durocher Daniel, Mann Matthias, Hogue Christopher W V, Figeys Daniel, Tyers Mike", "reference": { "type": "PubMed", "id": "11805837", "url": "https://pubmed.ncbi.nlm.nih.gov/11805837" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53192-1", "protein_name": "Golgi to ER traffic protein 1", "gene_name": "GET1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40056-1", "protein_name": "Golgi to ER traffic protein 2", "gene_name": "GET2", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q12154-1", "protein_name": "ATPase GET3", "gene_name": "GET3", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { 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[] } ] }, { "title": "Cooperative function of the CHD5-like protein Mdm39p with a P-type ATPase Spf1p in the maintenance of ER homeostasis in Saccharomyces cerevisiae.", "journal": "Mol. Genet. Genomics", "date": "2005", "authors": "Ando A, Suzuki C", "reference": { "type": "PubMed", "id": "15909163", "url": "https://pubmed.ncbi.nlm.nih.gov/15909163" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53192-1", "protein_name": "Golgi to ER traffic protein 1", "gene_name": "GET1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53192", "url": "https://www.uniprot.org/uniprotkb/P53192" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.15909163", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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"Jac1, a mitochondrial J-type chaperone, is involved in the biogenesis of Fe/S clusters in Saccharomyces cerevisiae.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2001-02-13", "authors": "Voisine C, Cheng Y C, Ohlson M, Schilke B, Hoff K, Beinert H, Marszalek J, Craig E A", "reference": { "type": "PubMed", "id": "11171977", "url": "https://pubmed.ncbi.nlm.nih.gov/11171977" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53193-1", "protein_name": "J-type co-chaperone JAC1, mitochondrial", "gene_name": "JAC1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53193", "url": "https://www.uniprot.org/uniprotkb/P53193" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "mutagenesis": [ { "start_pos": 48, "end_pos": 50, 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53193", "url": "https://www.uniprot.org/uniprotkb/P53193" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.11273703", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "J-domain protein, Jac1p, of yeast mitochondria required for iron homeostasis and activity of Fe-S cluster proteins.", "journal": "The Journal of biological chemistry", "date": "2001-05-18", "authors": "Kim R, Saxena S, Gordon D M, Pain D, Dancis A", "reference": { "type": "PubMed", "id": "11278728", "url": "https://pubmed.ncbi.nlm.nih.gov/11278728" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53193-1", "protein_name": "J-type co-chaperone JAC1, mitochondrial", "gene_name": "JAC1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53193", "url": "https://www.uniprot.org/uniprotkb/P53193" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C 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"total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ssq1, a mitochondrial Hsp70 involved in iron-sulfur (Fe/S) center biogenesis. Similarities to and differences from its bacterial counterpart.", "journal": "The Journal of biological chemistry", "date": "2003-08-08", "authors": "Dutkiewicz Rafal, Schilke Brenda, Knieszner Helena, Walter William, Craig Elizabeth A, Marszalek Jaroslaw", "reference": { "type": "PubMed", "id": "12756240", "url": "https://pubmed.ncbi.nlm.nih.gov/12756240" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53193-1", "protein_name": "J-type co-chaperone JAC1, mitochondrial", "gene_name": "JAC1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q05931-1", "protein_name": "Iron-sulfur cluster biogenesis chaperone, mitochondrial", "gene_name": "SSQ1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q03020-1", "protein_name": "Iron sulfur cluster assembly protein 1, mitochondrial", "gene_name": "ISU1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": 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"Sequence-specific interaction between mitochondrial Fe-S scaffold protein Isu and Hsp70 Ssq1 is essential for their in vivo function.", "journal": "The Journal of biological chemistry", "date": "2004-07-09", "authors": "Dutkiewicz Rafal, Schilke Brenda, Cheng Sara, Knieszner Helena, Craig Elizabeth A, Marszalek Jaroslaw", "reference": { "type": "PubMed", "id": "15123690", "url": "https://pubmed.ncbi.nlm.nih.gov/15123690" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53193-1", "protein_name": "J-type co-chaperone JAC1, mitochondrial", "gene_name": "JAC1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q05931-1", "protein_name": "Iron-sulfur cluster biogenesis chaperone, mitochondrial", "gene_name": "SSQ1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q03020-1", "protein_name": "Iron sulfur cluster assembly protein 1, mitochondrial", "gene_name": "ISU1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces 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Decreases vegetative cell population growth. Sensitive to high temperature. Abolishes JAC1 ATPase activator activity; when associated with A-20; A-35; S-38 and L-41.", "evidence": [ { "database": "UniProtKB", "id": "P53193", "url": "https://www.uniprot.org/uniprotkb/P53193" }, { "database": "PubMed", "id": "26545917", "url": "https://pubmed.ncbi.nlm.nih.gov/26545917" } ], "uniprot_canonical_ac": "P53193-1" }, { "start_pos": 49, "end_pos": 49, "sequence_org": "P", "sequence_mut": "A", "comment": "Decreases JAC1 ATPase activator activity. Decreases vegetative cell population growth. Sensitive to high temperature.", "evidence": [ { "database": "UniProtKB", "id": "P53193", "url": "https://www.uniprot.org/uniprotkb/P53193" }, { "database": "PubMed", "id": "26545917", "url": "https://pubmed.ncbi.nlm.nih.gov/26545917" } ], "uniprot_canonical_ac": "P53193-1" }, { "start_pos": 50, "end_pos": 50, "sequence_org": "D", "sequence_mut": "A", "comment": "Decreases JAC1 ATPase activator activity. 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[559292]" } ], "record_id": "pubmed.11448992", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 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J", "reference": { "type": "PubMed", "id": "11562348", "url": "https://pubmed.ncbi.nlm.nih.gov/11562348" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53197-1", "protein_name": "APC/C activator protein CDH1", "gene_name": "CDH1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P26309-1", "protein_name": "APC/C activator protein CDC20", "gene_name": "CDC20", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53197", "url": "https://www.uniprot.org/uniprotkb/P53197" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.11562348", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Direct physical and functional interaction of the NuA4 complex components Yaf9p and Swc4p.", "journal": "Eukaryot. Cell", "date": "2004", "authors": "Bittner Claudia B, Zeisig Deniz T, Zeisig Bernd B, Slany Robert K", "reference": { "type": "PubMed", "id": "15302830", "url": "https://pubmed.ncbi.nlm.nih.gov/15302830" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53201-1", "protein_name": "SWR1-complex protein 4", "gene_name": "SWC4", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P53930-1", "protein_name": "Protein AF-9 homolog", "gene_name": "YAF9", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53201", "url": "https://www.uniprot.org/uniprotkb/P53201" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.15302830", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "YCL047C/POF1 is a novel nicotinamide mononucleotide adenylyltransferase (NMNAT) in Saccharomyces cerevisiae.", "journal": "J. Biol. Chem.", "date": "2014", "authors": "Kato Michiko, Lin Su-Ju", "reference": { "type": "PubMed", "id": "24759102", "url": "https://pubmed.ncbi.nlm.nih.gov/24759102" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53204-1", "protein_name": "Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 2", "gene_name": "NMA2", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q06178-1", "protein_name": "Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1", "gene_name": "NMA1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P25576-1", "protein_name": "Nicotinamide mononucleotide adenylyltransferase", "gene_name": "POF1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53204", "url": "https://www.uniprot.org/uniprotkb/P53204" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.24759102", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A generic protein purification method for protein complex characterization and proteome exploration.", "journal": "Nat. Biotechnol.", "date": "1999", "authors": "Rigaut G, Shevchenko A, Rutz B, Wilm M, Mann M, S\u00e9raphin B", "reference": { "type": "PubMed", "id": "10504710", "url": "https://pubmed.ncbi.nlm.nih.gov/10504710" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53207-1", "protein_name": "U1 small nuclear ribonucleoprotein component SNU71", "gene_name": "SNU71", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P34160-1", "protein_name": "Nuclear cap-binding protein complex subunit 1", "gene_name": "STO1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q08920-1", "protein_name": "Nuclear cap-binding protein subunit 2", "gene_name": "CBC2", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q03776-1", "protein_name": "U1 small nuclear ribonucleoprotein component PRP42", "gene_name": "PRP42", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P23059-1", "protein_name": "N-alpha-acetyltransferase 38, NatC auxiliary subunit", 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"RNA", "date": "1998", "authors": "Gottschalk A, Tang J, Puig O, Salgado J, Neubauer G, Colot HV, Mann M, Seraphin B, Rosbash M, Luhrmann R, Fabrizio P", "reference": { "type": "PubMed", "id": "9630245", "url": "https://pubmed.ncbi.nlm.nih.gov/9630245" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53207-1", "protein_name": "U1 small nuclear ribonucleoprotein component SNU71", "gene_name": "SNU71", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q00539-1", "protein_name": "Protein NAM8", "gene_name": "NAM8", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q05900-1", "protein_name": "U1 small nuclear ribonucleoprotein C", "gene_name": "YHC1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40018-1", "protein_name": "Small nuclear ribonucleoprotein-associated protein B", "gene_name": "SMB1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q00916-1", "protein_name": "U1 small nuclear ribonucleoprotein 70 kDa 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ethyl acetate production by the elusive alcohol acetyltransferase from yeast.", "journal": "Metabolic engineering", "date": "2017-05", "authors": "Kruis Aleksander J, Levisson Mark, Mars Astrid E, van der Ploeg Max, Garc\u00e9s Daza Fernando, Ellena Valeria, Kengen Serv\u00e9 W M, van der Oost John, Weusthuis Ruud A", "reference": { "type": "PubMed", "id": "28356220", "url": "https://pubmed.ncbi.nlm.nih.gov/28356220" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P53208-1", "protein_name": "Ethanol acetyltransferase 1", "gene_name": "EAT1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P53219-1", "protein_name": "Probable alcohol acetyltransferase", "gene_name": "IMO32", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P53208", "url": "https://www.uniprot.org/uniprotkb/P53208" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.28356220", "abstract": "", "glycosylation": [], 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