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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Upregulation of miR-29b-3p alleviates coronary microembolization-induced myocardial injury via regulating BMF and GSK-3beta.", "journal": "Apoptosis : an international journal on programmed cell death", "date": "2023", "authors": "Qin Z, Wang X, Zhou Y, Zheng J, Li H, Li L", "reference": { "type": "PubMed", "id": "36315357", "url": "https://pubmed.ncbi.nlm.nih.gov/36315357" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8K589-1", "protein_name": "Bcl-2-modifying factor", "gene_name": "Bmf", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "Q8K589", "url": "https://www.uniprot.org/uniprotkb/Q8K589" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.36315357", "abstract": "", 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Neurochem.", "date": "2003", "authors": "Chen Dexi, Jin Kunlin, Kawaguchi Kenji, Nakayama Masaki, Zhou Xiaoman, Xiong Zhigang, Zhou An, Mao Xiao Ou, Greenberg David A, Graham Steven H, Simon Roger P", "reference": { "type": "PubMed", "id": "12694393", "url": "https://pubmed.ncbi.nlm.nih.gov/12694393" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8R4A1-1", "protein_name": "ERO1-like protein alpha", "gene_name": "Ero1a", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "Q8R4A1", "url": "https://www.uniprot.org/uniprotkb/Q8R4A1" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.12694393", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification and expression of a rat fatty acid elongase involved in the biosynthesis of C18 fatty acids.", "journal": "Biosci. Biotechnol. Biochem.", "date": "2002", "authors": "Inagaki K, Aki T, Fukuda Y, Kawamoto S, Shigeta S, Ono K, Suzuki O", "reference": { "type": "PubMed", "id": "12005057", "url": "https://pubmed.ncbi.nlm.nih.gov/12005057" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q920L7-1", "protein_name": "Very long chain fatty acid elongase 5", "gene_name": "Elovl5", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q920L6-1", "protein_name": "Very long chain fatty acid elongase 6", "gene_name": "Elovl6", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "Q920L7", "url": "https://www.uniprot.org/uniprotkb/Q920L7" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.12005057", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Elongase reactions as control points in long-chain polyunsaturated fatty acid synthesis.", "journal": "PloS one", "date": "2011", "authors": "Gregory Melissa K, Gibson Robert A, Cook-Johnson Rebecca J, Cleland Leslie G, James Michael J", "reference": { "type": "PubMed", "id": "22216341", "url": "https://pubmed.ncbi.nlm.nih.gov/22216341" }, "referenced_glycans": [], 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular basis for differential elongation of omega-3 docosapentaenoic acid by the rat Elovl5 and Elovl2.", "journal": "Journal of lipid research", "date": "2013", "authors": "Gregory MK, Cleland LG, James MJ", "reference": { "type": "PubMed", "id": "23873268", "url": "https://pubmed.ncbi.nlm.nih.gov/23873268" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q920L7-1", "protein_name": "Very long chain fatty acid elongase 5", "gene_name": "Elovl5", "tax_name": "Rat" }, { 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Can elongate (7Z,10Z,13Z,16Z,19Z)-3-oxodocosapentaenoyl-CoA into (9Z,12Z,15Z,18Z,21Z)-3-oxotetracosapentaenoyl-CoA.", "evidence": [ { "database": "UniProtKB", "id": "Q920L7", "url": "https://www.uniprot.org/uniprotkb/Q920L7" }, { "database": "PubMed", "id": "23873268", "url": "https://pubmed.ncbi.nlm.nih.gov/23873268" } ], "uniprot_canonical_ac": "Q920L7-1" }, { "start_pos": 233, "end_pos": 233, "sequence_org": "Y", "sequence_mut": "I", "comment": "No effect on fatty acid elongase activity.", "evidence": [ { "database": "UniProtKB", "id": "Q920L7", "url": "https://www.uniprot.org/uniprotkb/Q920L7" }, { "database": "PubMed", "id": "23873268", "url": "https://pubmed.ncbi.nlm.nih.gov/23873268" } ], "uniprot_canonical_ac": "Q920L7-1" }, { "start_pos": 217, "end_pos": 217, "sequence_org": "C", "sequence_mut": "A", "comment": "Decreased elongase activity toward (7Z,10Z,13Z,16Z,19Z)-docosapentaenoyl-CoA.", "evidence": [ { "database": "UniProtKB", "id": "D4A612", "url": 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"total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Role of maternal tissue in the synthesis of polyunsaturated fatty acids in response to a lipid-deficient diet during pregnancy and lactation in rats.", "journal": "Gene", "date": "2014", "authors": "Gonzalez 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U.S.A.", "date": "2006", "authors": "Partch CL, Shields KF, Thompson CL, Selby CP, Sancar A", "reference": { "type": "PubMed", "id": "16790549", "url": "https://pubmed.ncbi.nlm.nih.gov/16790549" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q923I8-1", "protein_name": "Cryptochrome-2", "gene_name": "Cry2", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q32Q86-1", "protein_name": "Cryptochrome-1", "gene_name": "Cry1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P97784-1", "protein_name": "Cryptochrome-1", "gene_name": "Cry1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q16526-1", "protein_name": "Cryptochrome-1", "gene_name": "CRY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53042-1", "protein_name": "Serine/threonine-protein phosphatase 5", "gene_name": "Ppp5c", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P53041-1", "protein_name": "Serine/threonine-protein phosphatase 5", "gene_name": "PPP5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49674-1", "protein_name": "Casein kinase I isoform epsilon", "gene_name": "CSNK1E", "tax_name": "Human" }, { "uniprot_canonical_ac": "O35973-1", "protein_name": "Period circadian protein homolog 1", "gene_name": "Per1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JMK2-1", "protein_name": "Casein kinase I isoform epsilon", "gene_name": "Csnk1e", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q60676-1", "protein_name": "Serine/threonine-protein phosphatase 5", "gene_name": "Ppp5c", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q49AN0-1", "protein_name": "Cryptochrome-2", "gene_name": "CRY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9WTL8-1", "protein_name": "Basic helix-loop-helix ARNT-like protein 1", "gene_name": "Bmal1", "tax_name": "Mouse" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "Q923I8", "url": "https://www.uniprot.org/uniprotkb/Q923I8" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "mutagenesis": [ { "start_pos": 304, "end_pos": 304, "sequence_org": "H", "sequence_mut": "Q", "comment": "Catalytically inactive; no effect on interaction with CRY2 but increases the stability of the interaction with CSNK1E. 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Biol. Chem.", "date": "2001", "authors": "Zhou H, Kartsogiannis V, Hu Y S, Elliott J, Quinn J M, McKinstry W J, Gillespie M T, Ng K W", "reference": { "type": "PubMed", "id": "11278931", "url": "https://pubmed.ncbi.nlm.nih.gov/11278931" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q925N7-1", "protein_name": "C-type lectin domain family 2 member D5", "gene_name": "Ocil", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q91V08-1", "protein_name": "C-type lectin domain family 2 member D", "gene_name": "Clec2d", "tax_name": "Mouse" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "Q925N7", "url": "https://www.uniprot.org/uniprotkb/Q925N7" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.11278931", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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"field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cytomegalovirus evasion of innate immunity by subversion of the NKR-P1B:Ocil/Clr-b missing-self axis.", "journal": "Immunity", "date": "2007", "authors": "Voigt S, Mesci A, Ettinger J, Fine JH, Chen P, Chou W, Carlyle JR", "reference": { "type": "PubMed", "id": "17462921", "url": "https://pubmed.ncbi.nlm.nih.gov/17462921" }, "referenced_glycans": [], 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Biol. Chem.", "date": "2001", "authors": "Zhang H, Wada J, Hida K, Tsuchiyama Y, Hiragushi K, Shikata K, Wang H, Lin S, Kanwar YS, Makino H", "reference": { "type": "PubMed", "id": "11278314", "url": "https://pubmed.ncbi.nlm.nih.gov/11278314" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ESG3-1", "protein_name": "Collectrin", "gene_name": "Cltrn", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q9ESG4-1", "protein_name": "Collectrin", "gene_name": "Cltrn", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9HBJ8-1", "protein_name": "Collectrin", "gene_name": "CLTRN", "tax_name": "Human" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "Q9ESG3", "url": "https://www.uniprot.org/uniprotkb/Q9ESG3" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.11278314", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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Shimomura I, Miyagawa J, Wollheim CB, Yamagata K", "reference": { "type": "PubMed", "id": "16330323", "url": "https://pubmed.ncbi.nlm.nih.gov/16330323" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ESG3-1", "protein_name": "Collectrin", "gene_name": "Cltrn", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q9ESG4-1", "protein_name": "Collectrin", "gene_name": "Cltrn", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9HBJ8-1", "protein_name": "Collectrin", "gene_name": "CLTRN", "tax_name": "Human" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "Q9ESG3", "url": "https://www.uniprot.org/uniprotkb/Q9ESG3" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.16330323", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Kanzaki M, Teshigawara S, Yamagata K, Le TH, Makino H", "reference": { "type": "PubMed", "id": "18981302", "url": "https://pubmed.ncbi.nlm.nih.gov/18981302" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ESG3-1", "protein_name": "Collectrin", "gene_name": "Cltrn", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "Q9ESG3", "url": "https://www.uniprot.org/uniprotkb/Q9ESG3" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.18981302", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", 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Chem.", "date": "1999", "authors": "Ohtaki T, Kumano S, Ishibashi Y, Ogi K, Matsui H, Harada M, Kitada C, Kurokawa T, Onda H, Fujino M", "reference": { "type": "PubMed", "id": "10601261", "url": "https://pubmed.ncbi.nlm.nih.gov/10601261" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9QXQ6-1", "protein_name": "Galanin-like peptide", "gene_name": "Galp", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q9UBC7-1", "protein_name": "Galanin-like peptide", "gene_name": "GALP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9TT95-1", "protein_name": "Galanin-like peptide", "gene_name": "GALP", "tax_name": "Pig" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "Q9QXQ6", "url": "https://www.uniprot.org/uniprotkb/Q9QXQ6" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.10601261", "abstract": "", "glycosylation": [], 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galanin-like peptide in rat and mouse models support that it is a leptin-target peptide.", "journal": "Endocrinology", "date": "2003", "authors": "Kumano S, Matsumoto H, Takatsu Y, Noguchi J, Kitada C, Ohtaki T", "reference": { "type": "PubMed", "id": "12746327", "url": "https://pubmed.ncbi.nlm.nih.gov/12746327" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9QXQ6-1", "protein_name": "Galanin-like peptide", "gene_name": "Galp", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q810H5-1", "protein_name": "Galanin-like peptide", "gene_name": "Galp", "tax_name": "Mouse" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "Q9QXQ6", "url": "https://www.uniprot.org/uniprotkb/Q9QXQ6" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.12746327", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]