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"evidence": [ { "database": "UniProtKB", "id": "P43267", "url": "https://www.uniprot.org/uniprotkb/P43267" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.16759287", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 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"Sox15 and Fhl3 transcriptionally coactivate Foxk1 and regulate myogenic progenitor cells.", "journal": "The EMBO journal", "date": "2007-04-04", "authors": "Meeson Annette P, Shi Xiaozhong, Alexander Matthew S, Williams R S, Allen Ronald E, Jiang Nan, Adham Ibrahim M, Goetsch Sean C, Hammer Robert E, Garry Daniel J", "reference": { "type": "PubMed", "id": "17363903", "url": "https://pubmed.ncbi.nlm.nih.gov/17363903" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P43267-1", "protein_name": "Transcription factor SOX-15", "gene_name": "Sox15", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9R059-1", "protein_name": "Four and a half LIM domains protein 3", "gene_name": "Fhl3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P42128-1", "protein_name": "Forkhead box protein K1", "gene_name": "Foxk1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P43267", "url": 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cloning and developmental expression of Sna, a murine homologue of the Drosophila snail gene.", "journal": "Development", "date": "1992", "authors": "Nieto MA, Bennett MF, Sargent MG, Wilkinson DG", "reference": { "type": "PubMed", "id": "1483390", "url": "https://pubmed.ncbi.nlm.nih.gov/1483390" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q02085-1", "protein_name": "Zinc finger protein SNAI1", "gene_name": "Snai1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q02085", "url": "https://www.uniprot.org/uniprotkb/Q02085" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.1483390", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ajuba LIM proteins are snail/slug corepressors required for neural crest development in Xenopus.", "journal": "Dev. Cell", "date": "2008", "authors": "Langer EM, Feng Y, Zhaoyuan H, Rauscher FJ 3rd, Kroll KL, Longmore GD", "reference": { "type": "PubMed", "id": "18331720", "url": "https://pubmed.ncbi.nlm.nih.gov/18331720" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q02085-1", "protein_name": "Zinc finger protein SNAI1", "gene_name": "Snai1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9QXD8-1", "protein_name": "LIM domain-containing protein 1", "gene_name": "Limd1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q91XC0-1", "protein_name": "LIM domain-containing protein ajuba", "gene_name": "Ajuba", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TQJ8-1", "protein_name": "Wilms tumor protein 1-interacting protein", "gene_name": "Wtip", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9UGP4-1", "protein_name": "LIM domain-containing protein 1", "gene_name": "LIMD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IF1-1", "protein_name": "LIM domain-containing protein ajuba", "gene_name": "AJUBA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95863-1", "protein_name": "Zinc finger protein SNAI1", "gene_name": "SNAI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NIX2-1", "protein_name": "Wilms tumor protein 1-interacting protein", "gene_name": "WTIP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99M85-1", "protein_name": "Transcriptional repressor scratch 1", "gene_name": "Scrt1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P97469-1", "protein_name": "Zinc finger protein SNAI2", "gene_name": "Snai2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q02085", "url": "https://www.uniprot.org/uniprotkb/Q02085" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.18331720", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 10 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of Snail nuclear import pathways as representatives of C2H2 zinc finger transcription factors.", "journal": "J. Cell Sci.", "date": "2009", "authors": "Mingot JM, Vega S, Maestro B, Sanz JM, Nieto MA", "reference": { "type": "PubMed", "id": "19386897", "url": "https://pubmed.ncbi.nlm.nih.gov/19386897" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q02085-1", "protein_name": "Zinc finger protein SNAI1", "gene_name": "Snai1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O43623-1", "protein_name": "Zinc finger protein SNAI2", "gene_name": "SNAI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95863-1", "protein_name": "Zinc finger protein SNAI1", "gene_name": "SNAI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52292-1", "protein_name": "Importin subunit alpha-1", "gene_name": "KPNA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14974-1", "protein_name": "Importin subunit beta-1", "gene_name": "KPNB1", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q02085", "url": "https://www.uniprot.org/uniprotkb/Q02085" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 166, "end_pos": 166, "sequence_org": "K", "sequence_mut": "E", "comment": "Abolishes binding to KPNA2, KPNB1 and IPO7 and impairs binding to TMPO1; when associated with E-175.", "evidence": [ { "database": "UniProtKB", "id": "O43623", "url": "https://www.uniprot.org/uniprotkb/O43623" }, { "database": "PubMed", "id": "19386897", "url": "https://pubmed.ncbi.nlm.nih.gov/19386897" } ], "uniprot_canonical_ac": "O43623-1" }, { "start_pos": 175, "end_pos": 175, "sequence_org": "K", "sequence_mut": "E", "comment": "Abolishes binding to KPNA2, KPNB1 and IPO7 and impairs binding to TMPO1; when associated with E-166.", "evidence": [ { "database": "UniProtKB", "id": "O43623", "url": "https://www.uniprot.org/uniprotkb/O43623" }, { "database": "PubMed", "id": "19386897", "url": "https://pubmed.ncbi.nlm.nih.gov/19386897" } ], "uniprot_canonical_ac": "O43623-1" }, { "start_pos": 192, "end_pos": 192, "sequence_org": "K", "sequence_mut": "E", "comment": "Abolishes binding to KPNA2 and impairs binding to KPNB1, IPO7 and TMPO1; when associated with E-196.", "evidence": [ { "database": "UniProtKB", "id": "O43623", "url": "https://www.uniprot.org/uniprotkb/O43623" }, { "database": "PubMed", "id": "19386897", "url": "https://pubmed.ncbi.nlm.nih.gov/19386897" } ], "uniprot_canonical_ac": "O43623-1" }, { "start_pos": 196, "end_pos": 196, "sequence_org": "R", "sequence_mut": "E", "comment": "Abolishes binding to KPNA2 and impairs binding to KPNB1, IPO7 and TMPO1; when associated with E-192.", "evidence": [ { "database": "UniProtKB", "id": "O43623", "url": "https://www.uniprot.org/uniprotkb/O43623" }, { "database": "PubMed", "id": "19386897", "url": "https://pubmed.ncbi.nlm.nih.gov/19386897" } ], "uniprot_canonical_ac": "O43623-1" }, { "start_pos": 225, "end_pos": 225, "sequence_org": "R", "sequence_mut": "E", "comment": "Abolishes binding to KPNA2, KPNB1 and IPO7 and impairs binding to TMPO1; when associated with E-229.", "evidence": [ { "database": "UniProtKB", "id": "O43623", "url": "https://www.uniprot.org/uniprotkb/O43623" }, { "database": "PubMed", "id": "19386897", "url": "https://pubmed.ncbi.nlm.nih.gov/19386897" } ], "uniprot_canonical_ac": "O43623-1" }, { "start_pos": 229, "end_pos": 229, "sequence_org": "R", "sequence_mut": "E", "comment": "Abolishes binding to KPNA2, KPNB1 and IPO7 and impairs binding to TMPO1; when associated with E-225.", "evidence": [ { "database": "UniProtKB", "id": "O43623", "url": "https://www.uniprot.org/uniprotkb/O43623" }, { "database": "PubMed", "id": "19386897", "url": "https://pubmed.ncbi.nlm.nih.gov/19386897" } ], "uniprot_canonical_ac": "O43623-1" }, { "start_pos": 151, "end_pos": 152, "sequence_org": "RK", "sequence_mut": "EE", "comment": "Does not affect binding to KPNB1, KPNA2, IPO7 or TNPO1.", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "19386897", "url": "https://pubmed.ncbi.nlm.nih.gov/19386897" } ], "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 156, "end_pos": 156, "sequence_org": "C", "sequence_mut": "A", "comment": "Abolishes binding to KPNB1, KPNA2, IPO7 and TNPO1 and nuclear localization.", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "19386897", "url": "https://pubmed.ncbi.nlm.nih.gov/19386897" } ], "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 161, "end_pos": 161, "sequence_org": "K", "sequence_mut": "E", "comment": "Does not affect binding to KPNB1, KPNA2, IPO7 or TNPO1. No change in subcellular localization. Impairs binding to KPNB1, KPNA2, IPO7 and TNPO1 and abolishes nuclear localization, DNA binding and repressor activity on E-cadherin/CDH1 promoter; when associated with E-170. Abolishes binding to KPNB1, KPNA2, IPO7 and TNPO1 and nuclear localization; when associated with E-187 and/or E-220.", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "19386897", "url": "https://pubmed.ncbi.nlm.nih.gov/19386897" } ], "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 170, "end_pos": 170, "sequence_org": "K", "sequence_mut": "E", "comment": "Does not affect binding to KPNB1, KPNA2, IPO7 or TNPO1. No change in subcellular localization. Impairs binding to KPNB1, KPNA2, IPO7 and TNPO1 and abolishes nuclear localization, DNA binding and repressor activity on E-cadherin/CDH1 promoter; when associated with E-161.", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "19386897", "url": "https://pubmed.ncbi.nlm.nih.gov/19386897" } ], "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 182, "end_pos": 182, "sequence_org": "C", "sequence_mut": "A", "comment": "Impairs binding to KPNB1, IPO7 and TNPO1 and abolishes binding to KPNA2. Localizes to cytoplasm and nucleus.", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "19386897", "url": "https://pubmed.ncbi.nlm.nih.gov/19386897" } ], "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 187, "end_pos": 187, "sequence_org": "K", "sequence_mut": "E", "comment": "Does not affect binding to KPNB1, KPNA2, IPO7 or TNPO1. Impairs binding to KPNB1, KPNA2, IPO7 and TNPO1 and abolishes nuclear localization, DNA binding and repressor activity on E-cadherin/CDH1 promoter; when associated with E-191. Abolishes binding to KPNB1, KPNA2, IPO7 and TNPO1 and nuclear localization; when associated with E-161 and/or E-220.", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "19386897", "url": "https://pubmed.ncbi.nlm.nih.gov/19386897" } ], "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 191, "end_pos": 191, "sequence_org": "R", "sequence_mut": "E", "comment": "Mildly reduces binding to KPNB1 and nuclear import. Does not affect binding to KPNA2, IPO7 or TNPO1. Strongly reduces binding to KPNB1 and nuclear import; when associated with A-193. Loss of binding to KPNB1 and nuclear import; when associated with A-193 and A-196.", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "19386897", "url": "https://pubmed.ncbi.nlm.nih.gov/19386897" }, { "database": "PubMed", "id": "24699649", "url": "https://pubmed.ncbi.nlm.nih.gov/24699649" } ], "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 210, "end_pos": 210, "sequence_org": "C", "sequence_mut": "A", "comment": "Impairs binding to KPNB1, IPO7 and TNPO1 and abolishes binding to KPNA2. Localizes to cytoplasm and nucleus.", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "19386897", "url": "https://pubmed.ncbi.nlm.nih.gov/19386897" } ], "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 215, "end_pos": 215, "sequence_org": "R", "sequence_mut": "E", "comment": "Impairs binding to KPNB1, KPNA2, IPO7 and TNPO1. No change in subcellular localization.", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "19386897", "url": "https://pubmed.ncbi.nlm.nih.gov/19386897" } ], "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 220, "end_pos": 220, "sequence_org": "R", "sequence_mut": "E", "comment": "Does not affect binding to KPNB1, KPNA2, IPO7 or TNPO1. No change in subcellular localization. Impairs binding to KPNB1, KPNA2, IPO7 and TNPO1; when associated with E-222 and E-224. Impairs binding to KPNB1, KPNA2, IPO7 and TNPO1 and abolishes nuclear localization, DNA binding and repressor activity on E-cadherin/CDH1 promoter; when associated with E-224. Abolishes binding to KPNB1, KPNA2, IPO7 and TNPO1 and nuclear localization; when associated with E-161 and/or E-187.", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "19386897", "url": "https://pubmed.ncbi.nlm.nih.gov/19386897" } ], "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 222, "end_pos": 222, "sequence_org": "N", "sequence_mut": "E", "comment": "Does not affect binding to KPNB1, KPNA2, IPO7 or TNPO1. No change in subcellular localization. Impairs binding to KPNB1, KPNA2, IPO7 and TNPO1; when associated with E-220 and E-224.", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "19386897", "url": "https://pubmed.ncbi.nlm.nih.gov/19386897" } ], "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 224, "end_pos": 224, "sequence_org": "R", "sequence_mut": "E", "comment": "Does not affect binding to KPNB1, KPNA2, IPO7 or TNPO1. No change in subcellular localization. Impairs binding to KPNB1, KPNA2, IPO7 and TNPO1; when associated with E-220 and E-222. Impairs binding to KPNB1, KPNA2, IPO7 and TNPO1 and abolishes nuclear localization, DNA binding and repressor activity on E-cadherin/CDH1 promoter; when associated with E-220. Strongly reduces binding to KPNB1 and nuclear import; when associated with A-228.", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "19386897", "url": "https://pubmed.ncbi.nlm.nih.gov/19386897" }, { "database": "PubMed", "id": "24699649", "url": "https://pubmed.ncbi.nlm.nih.gov/24699649" } ], "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 232, "end_pos": 235, "sequence_org": "DVKK", "sequence_mut": "KVEE", "comment": "Does not affect binding to KPNB1, KPNA2, IPO7 or TNPO1.", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "19386897", "url": "https://pubmed.ncbi.nlm.nih.gov/19386897" } ], "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 238, "end_pos": 238, "sequence_org": "C", "sequence_mut": "A", "comment": "Impairs binding to KPNB1 and IPO7 and abolishes binding to KPNA2 and TNPO1 and nuclear localization.", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "19386897", "url": "https://pubmed.ncbi.nlm.nih.gov/19386897" } ], "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 239, "end_pos": 239, "sequence_org": "Q", "sequence_mut": "E", "comment": "Does not affect binding to KPNB1, KPNA2, IPO7, TNPO1 or DNA.", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "19386897", "url": "https://pubmed.ncbi.nlm.nih.gov/19386897" } ], "uniprot_canonical_ac": "O95863-1" } ], "record_id": "pubmed.19386897", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Phosphorylation of serine 11 and serine 92 as new positive regulators of human Snail1 function: potential involvement of casein kinase-2 and the cAMP-activated kinase protein kinase A.", "journal": "Mol. Biol. Cell", "date": "2010", "authors": "MacPherson MR, Molina P, Souchelnytskyi S, Wernstedt C, Martin-Perez J, Portillo F, Cano A", "reference": { "type": "PubMed", "id": "19923321", "url": "https://pubmed.ncbi.nlm.nih.gov/19923321" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q02085-1", "protein_name": "Zinc finger protein SNAI1", "gene_name": "Snai1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O95863-1", "protein_name": "Zinc finger protein SNAI1", "gene_name": "SNAI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68400-1", "protein_name": "Casein kinase II subunit alpha", "gene_name": "CSNK2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60737-1", "protein_name": "Casein kinase II subunit alpha", "gene_name": "Csnk2a1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q02085", "url": "https://www.uniprot.org/uniprotkb/Q02085" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 104, "end_pos": 104, "sequence_org": "S", "sequence_mut": "A", "comment": "Increases protein stability, does not affect repressor activity on E-cadherin/CDH1 promoter, preferentially localizes to the nucleus, induces a more aggressive tissue invasion program and impairs phosphorylation by GSK3B, binding to BTRC and ubiquitination; when associated with A-107. Impairs phosphorylation in the serine-rich domain/region; when associated with A-92 and A-107. Abolishes phosphorylation at S-96.", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "20305697", "url": "https://pubmed.ncbi.nlm.nih.gov/20305697" }, { "database": "PubMed", "id": "15647282", "url": "https://pubmed.ncbi.nlm.nih.gov/15647282" }, { "database": "PubMed", "id": "19923321", "url": "https://pubmed.ncbi.nlm.nih.gov/19923321" } ], "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 107, "end_pos": 107, "sequence_org": "S", "sequence_mut": "A", "comment": "Lower sensitivity to BTRC-triggered degradation, impaired phosphorylation by GSK3B and loss of cytoplasmic localization; when associated with A-111; A-115 and A-119. Lower sensitivity to BTRC-triggered degradation, impaired phosphorylation by GSK3B and loss of cytoplasmic localization; when associated with A-96; A-100; A-111; A-115 and A-119. Increases protein stability, does not affect repressor activity on E-cadherin promoter, preferentially localizes to the nucleus, induces a more aggressive tissue invasion program and impairs phosphorylation by GSK3B, binding to BTRC and ubiquitination; when associated with A-104. Impairs phosphorylation in the serine-rich region; when associated with A-92 and A-104. Abolishes phosphorylation at S-96.", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "15448698", "url": "https://pubmed.ncbi.nlm.nih.gov/15448698" }, { "database": "PubMed", "id": "20305697", "url": "https://pubmed.ncbi.nlm.nih.gov/20305697" }, { "database": "PubMed", "id": "15647282", "url": "https://pubmed.ncbi.nlm.nih.gov/15647282" }, { "database": "PubMed", "id": "19923321", "url": "https://pubmed.ncbi.nlm.nih.gov/19923321" }, { "database": "PubMed", "id": "29059170", "url": "https://pubmed.ncbi.nlm.nih.gov/29059170" }, { "database": "PubMed", "id": "25827072", "url": "https://pubmed.ncbi.nlm.nih.gov/25827072" } ], "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 107, "end_pos": 107, "sequence_org": "S", "sequence_mut": "E", "comment": "Predominantly localized to the cytoplasm; when associated with E-111; E-115 and E-119.", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "15448698", "url": "https://pubmed.ncbi.nlm.nih.gov/15448698" }, { "database": "PubMed", "id": "20305697", "url": "https://pubmed.ncbi.nlm.nih.gov/20305697" }, { "database": "PubMed", "id": "15647282", "url": "https://pubmed.ncbi.nlm.nih.gov/15647282" }, { "database": "PubMed", "id": "19923321", "url": "https://pubmed.ncbi.nlm.nih.gov/19923321" } ], "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 11, "end_pos": 11, "sequence_org": "S", "sequence_mut": "A", "comment": "Abolishes PKA phosphorylation. Strongly decreases repressor activity on E-cadherin/CDH1 and CLDN1 promoters. Increases protein stability. Affects function in EMT.", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "19923321", "url": "https://pubmed.ncbi.nlm.nih.gov/19923321" } ], "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 92, "end_pos": 92, "sequence_org": "S", "sequence_mut": "A", "comment": "Abolishes CK2 phosphorylation. Strongly decreases repressor activity on E-cadherin/CDH1 and CLDN1 promoters. Increases protein stability. Affects function in cell survival. Abolishes phosphorylation in the serine-rich region; when associated with A-104 and A-107.", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "19923321", "url": "https://pubmed.ncbi.nlm.nih.gov/19923321" } ], "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 92, "end_pos": 92, "sequence_org": "S", "sequence_mut": "E", "comment": "Does not affect repressor activity on E-cadherin/CDH1 promoter.", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "19923321", "url": "https://pubmed.ncbi.nlm.nih.gov/19923321" } ], "uniprot_canonical_ac": "O95863-1" } ], "phosphorylation": [ { "start_pos": 104, "end_pos": 104, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "19923321", "url": "https://pubmed.ncbi.nlm.nih.gov/19923321" }, { "database": "PubMed", "id": "15647282", "url": "https://pubmed.ncbi.nlm.nih.gov/15647282" }, { "database": "PubMed", "id": "15448698", "url": "https://pubmed.ncbi.nlm.nih.gov/15448698" }, { "database": "iPTMnet", "id": "O95863", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O95863" }, { "database": "PubMed", "id": "23449453", "url": "https://pubmed.ncbi.nlm.nih.gov/23449453" } ], "site_lbl": "Ser104", "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 107, "end_pos": 107, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "19923321", "url": "https://pubmed.ncbi.nlm.nih.gov/19923321" }, { "database": "PubMed", "id": "15448698", "url": "https://pubmed.ncbi.nlm.nih.gov/15448698" }, { "database": "PubMed", "id": "15647282", "url": "https://pubmed.ncbi.nlm.nih.gov/15647282" }, { "database": "iPTMnet", "id": "O95863", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O95863" }, { "database": "PubMed", "id": "23449453", "url": "https://pubmed.ncbi.nlm.nih.gov/23449453" } ], "site_lbl": "Ser107", "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 11, "end_pos": 11, "kinase_uniprot_canonical_ac": "P68400-1", "kinase_gene_name": "CSNK2A1", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "O95863", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O95863" }, { "database": "PubMed", "id": "19923321", "url": "https://pubmed.ncbi.nlm.nih.gov/19923321" } ], "site_lbl": "Ser11", "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 11, "end_pos": 11, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine; by PKA", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "iPTMnet", "id": "O95863", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O95863" }, { "database": "PubMed", "id": "19923321", "url": "https://pubmed.ncbi.nlm.nih.gov/19923321" }, { "database": "PubMed", "id": "22791710", "url": "https://pubmed.ncbi.nlm.nih.gov/22791710" }, { "database": "PubMed", "id": "25203322", "url": "https://pubmed.ncbi.nlm.nih.gov/25203322" }, { "database": "PubMed", "id": "22276203", "url": "https://pubmed.ncbi.nlm.nih.gov/22276203" } ], "site_lbl": "Ser11", "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 246, "end_pos": 246, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine; by PAK1", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "iPTMnet", "id": "O95863", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O95863" }, { "database": "PubMed", "id": "15833848", "url": "https://pubmed.ncbi.nlm.nih.gov/15833848" }, { "database": "PubMed", "id": "19860811", "url": "https://pubmed.ncbi.nlm.nih.gov/19860811" }, { "database": "PubMed", "id": "19923321", "url": "https://pubmed.ncbi.nlm.nih.gov/19923321" }, { "database": "PubMed", "id": "28423359", "url": "https://pubmed.ncbi.nlm.nih.gov/28423359" } ], "site_lbl": "Ser246", "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 82, "end_pos": 82, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "PubMed", "id": "19923321", "url": "https://pubmed.ncbi.nlm.nih.gov/19923321" }, { "database": "iPTMnet", "id": "O95863", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O95863" } ], "site_lbl": "Ser82", "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 92, "end_pos": 92, "kinase_uniprot_canonical_ac": "P68400-1", "kinase_gene_name": "CSNK2A1", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "O95863", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O95863" }, { "database": "PubMed", "id": "19923321", "url": "https://pubmed.ncbi.nlm.nih.gov/19923321" } ], "site_lbl": "Ser92", "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 92, "end_pos": 92, "kinase_uniprot_canonical_ac": "Q13131-1", "kinase_gene_name": "PRKAA1", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "O95863", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O95863" }, { "database": "PubMed", "id": "19923321", "url": "https://pubmed.ncbi.nlm.nih.gov/19923321" } ], "site_lbl": "Ser92", "uniprot_canonical_ac": "O95863-1" }, { "start_pos": 92, "end_pos": 92, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine; by CK2", "evidence": [ { "database": "UniProtKB", "id": "O95863", "url": "https://www.uniprot.org/uniprotkb/O95863" }, { "database": "iPTMnet", "id": "O95863", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O95863" }, { "database": "PubMed", "id": "15302935", "url": "https://pubmed.ncbi.nlm.nih.gov/15302935" }, { "database": "PubMed", "id": "19923321", "url": "https://pubmed.ncbi.nlm.nih.gov/19923321" } ], "site_lbl": "Ser92", "uniprot_canonical_ac": "O95863-1" } ], "record_id": "pubmed.19923321", "abstract": "", "glycosylation": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 9 }, { "field": "total_sites", "count": 6 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The hypoxia-controlled FBXL14 ubiquitin ligase targets SNAIL1 for proteasome degradation.", "journal": "J. Biol. Chem.", "date": "2010", "authors": "Vinas-Castells R, Beltran M, Valls G, Gomez I, Garcia JM, Montserrat-Sentis B, Baulida J, Bonilla F, de Herreros AG, Diaz VM", "reference": { "type": "PubMed", "id": "19955572", "url": "https://pubmed.ncbi.nlm.nih.gov/19955572" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q02085-1", "protein_name": "Zinc finger protein SNAI1", "gene_name": "Snai1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BID8-1", "protein_name": "F-box/LRR-repeat protein 14", "gene_name": "Fbxl14", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O95863-1", "protein_name": "Zinc finger protein SNAI1", "gene_name": "SNAI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N1E6-1", "protein_name": "F-box/LRR-repeat protein 14", "gene_name": "FBXL14", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q02085", "url": "https://www.uniprot.org/uniprotkb/Q02085" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 137, "end_pos": 137, "sequence_org": "K", "sequence_mut": "R", "comment": "Lower sensitivity to FBXL14-triggered degradation. 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Increase of SUMO-1 expression in response to hypoxia: direct interaction with HIF-1alpha in adult mouse brain and heart in vivo.", "journal": "FEBS Lett.", "date": "2004", "authors": "Shao R, Zhang FP, Tian F, Anders Friberg P, Wang X, Sjoland H, Billig H", "reference": { "type": "PubMed", "id": "15225651", "url": "https://pubmed.ncbi.nlm.nih.gov/15225651" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P63166-1", "protein_name": "Small ubiquitin-related modifier 1", "gene_name": "Sumo1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q61221-1", "protein_name": "Hypoxia-inducible factor 1-alpha", "gene_name": "Hif1a", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P63166", "url": "https://www.uniprot.org/uniprotkb/P63166" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15225651", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ikaros SUMOylation: switching out of repression.", "journal": "Mol. Cell. Biol.", "date": "2005", "authors": "Gomez-del Arco P, Koipally J, Georgopoulos K", "reference": { "type": "PubMed", "id": "15767674", "url": "https://pubmed.ncbi.nlm.nih.gov/15767674" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P63166-1", "protein_name": "Small ubiquitin-related modifier 1", "gene_name": "Sumo1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q03267-1", "protein_name": "DNA-binding protein Ikaros", "gene_name": "Ikzf1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C5D8-1", "protein_name": "E3 SUMO-protein ligase PIAS2", "gene_name": "Pias2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P63166", "url": "https://www.uniprot.org/uniprotkb/P63166" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 239, "end_pos": 239, "sequence_org": "K", "sequence_mut": "R", "comment": "Some loss of sumoylation. Complete loss of sumoylation, increased repressor activity but no change in pericentromeric heterochromatin location.; when associated with R-58 and R-459.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "15767674", "url": "https://pubmed.ncbi.nlm.nih.gov/15767674" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 424, "end_pos": 424, "sequence_org": "K", "sequence_mut": "R", "comment": "No effect on sumoylation.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "15767674", "url": "https://pubmed.ncbi.nlm.nih.gov/15767674" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 458, "end_pos": 458, "sequence_org": "K", "sequence_mut": "R", "comment": "No effect on sumoylation.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "15767674", "url": "https://pubmed.ncbi.nlm.nih.gov/15767674" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 58, "end_pos": 58, "sequence_org": "K", "sequence_mut": "R", "comment": "Some loss of sumoylation. Complete loss of sumoylation, increased repressor activity but no change in pericentromeric heterochromatin location; when associated with R-240 and R-459.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "15767674", "url": "https://pubmed.ncbi.nlm.nih.gov/15767674" } ], "uniprot_canonical_ac": "Q03267-1" } ], "record_id": "pubmed.15767674", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "BCL11A is a SUMOylated protein and recruits SUMO-conjugation enzymes in its nuclear body.", "journal": "Genes Cells", "date": "2008", "authors": "Kuwata T, Nakamura T", "reference": { "type": "PubMed", "id": "18681895", "url": "https://pubmed.ncbi.nlm.nih.gov/18681895" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P63166-1", "protein_name": "Small ubiquitin-related modifier 1", "gene_name": "Sumo1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O54714-1", "protein_name": "E3 SUMO-protein ligase PIAS3", "gene_name": "Pias3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P63280-1", "protein_name": "SUMO-conjugating enzyme UBC9", "gene_name": "Ube2i", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9QYE3-1", "protein_name": "BCL11 transcription factor A", "gene_name": "Bcl11a", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P63166", "url": "https://www.uniprot.org/uniprotkb/P63166" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 123, "end_pos": 123, "sequence_org": "K", "sequence_mut": "R", "comment": "No effect on sumoylation.", "evidence": [ { "database": "UniProtKB", "id": "Q9QYE3", "url": "https://www.uniprot.org/uniprotkb/Q9QYE3" }, { "database": "PubMed", "id": "18681895", "url": "https://pubmed.ncbi.nlm.nih.gov/18681895" } ], "uniprot_canonical_ac": "Q9QYE3-1" }, { "start_pos": 637, "end_pos": 637, "sequence_org": "K", "sequence_mut": "R", "comment": "Abolishes sumoylation. 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Redox Signal.", "date": "2019", "authors": "Cortes-Montero E, Rodriguez-Munoz M, Sanchez-Blazquez P, Garzon J", "reference": { "type": "PubMed", "id": "31088288", "url": "https://pubmed.ncbi.nlm.nih.gov/31088288" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P63166-1", "protein_name": "Small ubiquitin-related modifier 1", "gene_name": "Sumo1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P49773-1", "protein_name": "Adenosine 5'-monophosphoramidase HINT1", "gene_name": "HINT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46061-1", "protein_name": "Ran GTPase-activating protein 1", "gene_name": "Rangap1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P70349-1", "protein_name": "Adenosine 5'-monophosphoramidase HINT1", "gene_name": "Hint1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9WTS4-1", "protein_name": "Teneurin-1", "gene_name": "Tenm1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CPS6-1", "protein_name": "Adenosine 5'-monophosphoramidase HINT3", "gene_name": "Hint3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P0DP26-1", "protein_name": "Calmodulin-1", "gene_name": "Calm1; Calm2; Calm3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P61957-1", "protein_name": "Small ubiquitin-related modifier 2", "gene_name": "Sumo2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9QZB0-1", "protein_name": "Regulator of G protein signaling 17", "gene_name": "Rgs17", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P63166", "url": "https://www.uniprot.org/uniprotkb/P63166" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 114, "end_pos": 114, "sequence_org": "H", "sequence_mut": "R", "comment": "Loss of SUMO-specific isopeptidase activity.", "evidence": [ { "database": "UniProtKB", "id": "P49773", "url": "https://www.uniprot.org/uniprotkb/P49773" }, { "database": "PubMed", "id": "31088288", "url": "https://pubmed.ncbi.nlm.nih.gov/31088288" } ], "uniprot_canonical_ac": "P49773-1" }, { "start_pos": 33, "end_pos": 33, "sequence_org": "F", "sequence_mut": "S", "comment": "Loss of SUMO-specific isopeptidase activity.", "evidence": [ { "database": "UniProtKB", "id": "P49773", "url": "https://www.uniprot.org/uniprotkb/P49773" }, { "database": "PubMed", "id": "31088288", "url": "https://pubmed.ncbi.nlm.nih.gov/31088288" } ], "uniprot_canonical_ac": "P49773-1" }, { "start_pos": 34, "end_pos": 34, "sequence_org": "E", "sequence_mut": "K", "comment": "Reduced SUMO-specific isopeptidase activity.", "evidence": [ { "database": "UniProtKB", "id": "P49773", "url": "https://www.uniprot.org/uniprotkb/P49773" }, { "database": "PubMed", "id": "31088288", "url": "https://pubmed.ncbi.nlm.nih.gov/31088288" } ], "uniprot_canonical_ac": "P49773-1" }, { "start_pos": 38, "end_pos": 38, "sequence_org": "C", "sequence_mut": "R", "comment": "No effect on SUMO-specific isopeptidase activity.", "evidence": [ { "database": "UniProtKB", "id": "P49773", "url": "https://www.uniprot.org/uniprotkb/P49773" }, { "database": "PubMed", "id": "31088288", "url": "https://pubmed.ncbi.nlm.nih.gov/31088288" } ], "uniprot_canonical_ac": "P49773-1" }, { "start_pos": 57, "end_pos": 57, "sequence_org": "K", "sequence_mut": "N", "comment": "Loss of SUMO-specific isopeptidase activity.", "evidence": [ { "database": "UniProtKB", "id": "P49773", "url": "https://www.uniprot.org/uniprotkb/P49773" }, { "database": "PubMed", "id": "31088288", "url": "https://pubmed.ncbi.nlm.nih.gov/31088288" } ], "uniprot_canonical_ac": "P49773-1" }, { "start_pos": 97, "end_pos": 97, "sequence_org": "V", "sequence_mut": "M", "comment": "Loss of SUMO-specific isopeptidase activity.", "evidence": [ { "database": "UniProtKB", "id": "P49773", "url": "https://www.uniprot.org/uniprotkb/P49773" }, { "database": "PubMed", "id": "31088288", "url": "https://pubmed.ncbi.nlm.nih.gov/31088288" } ], "uniprot_canonical_ac": "P49773-1" }, { "start_pos": 112, "end_pos": 112, "sequence_org": "H", "sequence_mut": "N", "comment": "Reduced interaction with SUMO2.", "evidence": [ { "database": "UniProtKB", "id": "P70349", "url": "https://www.uniprot.org/uniprotkb/P70349" }, { "database": "PubMed", "id": "31088288", "url": "https://pubmed.ncbi.nlm.nih.gov/31088288" } ], "uniprot_canonical_ac": "P70349-1" }, { "start_pos": 114, "end_pos": 114, "sequence_org": "H", "sequence_mut": "R", "comment": "Reduced interaction with SUMO2.", "evidence": [ { "database": "UniProtKB", "id": "P70349", "url": "https://www.uniprot.org/uniprotkb/P70349" }, { "database": "PubMed", "id": "31088288", "url": "https://pubmed.ncbi.nlm.nih.gov/31088288" } ], "uniprot_canonical_ac": "P70349-1" }, { "start_pos": 115, "end_pos": 115, "sequence_org": "V", "sequence_mut": "D", "comment": "Significantly reduced interaction with SUMO2. 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"High sequence conservation between rat (T200) and mouse (Ly-5) leukocyte common antigens.", "journal": "Immunogenetics", "date": "1987", "authors": "Gonez L J, Walker I D, Sandrin M S, McKenzie I F", "reference": { "type": "PubMed", "id": "3570377", "url": "https://pubmed.ncbi.nlm.nih.gov/3570377" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P06800-4", "protein_name": "Receptor-type tyrosine-protein phosphatase C", "gene_name": "Ptprc", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P06800", "url": "https://www.uniprot.org/uniprotkb/P06800" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.3570377", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", 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U.S.A.", "date": "1985", "authors": "Shen F W, Saga Y, Litman G, Freeman G, Tung J S, Cantor H, Boyse E A", "reference": { "type": "PubMed", "id": "3864163", "url": "https://pubmed.ncbi.nlm.nih.gov/3864163" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P06800-4", "protein_name": "Receptor-type tyrosine-protein phosphatase C", "gene_name": "Ptprc", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P06800", "url": "https://www.uniprot.org/uniprotkb/P06800" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.3864163", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of the CD45-associated 116-kDa and 80-kDa proteins as the alpha- and beta-subunits of alpha-glucosidase II.", "journal": "J. 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