[ { "title": "The polarity protein Inturned links NPHP4 to Daam1 to control the subapical actin network in multiciliated cells.", "journal": "J. Cell Biol.", "date": "2015", "authors": "Yasunaga Takayuki, Hoff Sylvia, Schell Christoph, Helmst\u00e4dter Martin, Kretz Oliver, Kuechlin Sebastian, Yakulov Toma A, Engel Christina, M\u00fcller Barbara, Bensch Robert, Ronneberger Olaf, Huber Tobias B, Lienkamp Soeren S, Walz Gerd", "reference": { "type": "PubMed", "id": "26644512", "url": "https://pubmed.ncbi.nlm.nih.gov/26644512" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y4D1-1", "protein_name": "Disheveled-associated activator of morphogenesis 1", "gene_name": "DAAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75161-1", "protein_name": "Nephrocystin-4", "gene_name": "NPHP4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y4D1", "url": "https://www.uniprot.org/uniprotkb/Q9Y4D1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.26644512", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Depletion of tumor suppressor Kank1 induces centrosomal amplification via hyperactivation of RhoA.", "journal": "Exp. Cell Res.", "date": "2017", "authors": "Suzuki JI, Roy BC, Ogaeri T, Kakinuma N, Kiyama R", "reference": { "type": "PubMed", "id": "28284839", "url": "https://pubmed.ncbi.nlm.nih.gov/28284839" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y4D1-1", "protein_name": "Disheveled-associated activator of morphogenesis 1", "gene_name": "DAAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9QUI0-1", "protein_name": "Transforming protein RhoA", "gene_name": "Rhoa", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BPM0-1", "protein_name": "Disheveled-associated activator of morphogenesis 1", "gene_name": "Daam1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q238-1", "protein_name": "KN motif and ankyrin repeat domains 1", "gene_name": "Kank1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q14678-1", "protein_name": "KN motif and ankyrin repeat domain-containing protein 1", "gene_name": "KANK1", "tax_name": "Human" } ], "species": [ { 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The lack of high affinity calcium binding to D-domains and the lack of protective effect of calcium on fibrinolysis.", "journal": "The Journal of biological chemistry", "date": "1992", "authors": "Yoshida N, Hirata H, Morigami Y, Imaoka S, Matsuda M, Yamazumi K, Asakura S", "reference": { "type": "PubMed", "id": "1733971", "url": "https://pubmed.ncbi.nlm.nih.gov/1733971" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P02679-1", "protein_name": "Fibrinogen gamma chain", "gene_name": "FGG", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P02679", "url": "https://www.uniprot.org/uniprotkb/P02679" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1733971", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Evidence for a unique solitary cystine structure at the mutation site.", "journal": "The Journal of biological chemistry", "date": "1988", "authors": "Terukina S, Matsuda M, Hirata H, Takeda Y, Miyata T, Takao T, Shimonishi Y", "reference": { "type": "PubMed", "id": "2971042", "url": "https://pubmed.ncbi.nlm.nih.gov/2971042" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P02679-1", "protein_name": "Fibrinogen gamma chain", "gene_name": "FGG", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P02679", "url": "https://www.uniprot.org/uniprotkb/P02679" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2971042", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of an apparently lower molecular weight gamma-chain variant in fibrinogen Kyoto I. 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Biol. 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Synthesis and structure-function relationship of peptides corresponding to the carboxy-terminal segment of the gamma chain.", "journal": "Biochemistry", "date": "1984", "authors": "Kloczewiak M, Timmons S, Lukas T J, Hawiger J", "reference": { "type": "PubMed", "id": "6326808", "url": "https://pubmed.ncbi.nlm.nih.gov/6326808" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P02679-1", "protein_name": "Fibrinogen gamma chain", "gene_name": "FGG", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P02679", "url": "https://www.uniprot.org/uniprotkb/P02679" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.6326808", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Localization of a fibrin polymerization site.", "journal": "J. 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plasminogen and t-PA in three new dysfibrinogenaemias: Barcelona III and IV (gamma Arg 275-->His) and Villajoyosa (gamma Arg 275-->Cys).", "journal": "Blood coagulation & fibrinolysis : an international journal in haemostasis and thrombosis", "date": "1995", "authors": "Borrell M, Gari M, Coll I, Vallve C, Tirado I, Soria JM, Sala N, Munoz C, Oliver A, Garcia A, et al.", "reference": { "type": "PubMed", "id": "7654933", "url": "https://pubmed.ncbi.nlm.nih.gov/7654933" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P02679-1", "protein_name": "Fibrinogen gamma chain", "gene_name": "FGG", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P02679", "url": "https://www.uniprot.org/uniprotkb/P02679" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7654933", "abstract": "", "glycosylation": [], "mutagenesis": [], 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Shedding of collagen XXIII is mediated by furin and depends on the plasma membrane microenvironment.", "journal": "The Journal of biological chemistry", "date": "2007", "authors": "Veit G, Zimina EP, Franzke CW, Kutsch S, Siebolds U, Gordon MK, Bruckner-Tuderman L, Koch M", "reference": { "type": "PubMed", "id": "17627939", "url": "https://pubmed.ncbi.nlm.nih.gov/17627939" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86Y22-1", "protein_name": "Collagen alpha-1(XXIII) chain", "gene_name": "COL23A1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86Y22", "url": "https://www.uniprot.org/uniprotkb/Q86Y22" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17627939", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Collagen XXIII, novel ligand for integrin alpha2beta1 in the epidermis.", "journal": "The Journal of biological chemistry", "date": "2011", "authors": "Veit G, Zwolanek D, Eckes B, Niland S, Kapyla J, Zweers MC, Ishada-Yamamoto A, Krieg T, Heino J, Eble JA, Koch M", "reference": { "type": "PubMed", "id": "21652699", "url": "https://pubmed.ncbi.nlm.nih.gov/21652699" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86Y22-1", "protein_name": "Collagen alpha-1(XXIII) chain", "gene_name": "COL23A1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86Y22", "url": "https://www.uniprot.org/uniprotkb/Q86Y22" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21652699", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "ACBD3 interaction with TBC1 domain 22 protein is differentially affected by enteroviral and kobuviral 3A protein binding.", "journal": "MBio", "date": "2013", "authors": "Greninger AL, Knudsen GM, Betegon M, Burlingame AL, DeRisi JL", "reference": { "type": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5T2E6-1", "protein_name": "Armadillo-like helical domain-containing protein 3", "gene_name": "ARMH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NU19-1", "protein_name": "TBC1 domain family member 22B", "gene_name": "TBC1D22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31947-1", "protein_name": "14-3-3 protein sigma", "gene_name": "SFN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBF8-1", "protein_name": "Phosphatidylinositol 4-kinase beta", "gene_name": "PI4KB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3P7-1", "protein_name": "Golgi resident protein GCP60", "gene_name": "ACBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6D6-1", "protein_name": "Brefeldin A-inhibited guanine nucleotide-exchange protein 1", "gene_name": "ARFGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15907-1", "protein_name": "Ras-related protein Rab-11B", "gene_name": "RAB11B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WUA7-1", "protein_name": "TBC1 domain 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"Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 100, "end_pos": 101, "sequence_org": "VL", "sequence_mut": "AA", "comment": "Almost complete loss of ACBD3-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9NU19", "url": "https://www.uniprot.org/uniprotkb/Q9NU19" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9NU19-1" }, { "start_pos": 102, "end_pos": 104, "sequence_org": "ENH", "sequence_mut": "AAA", "comment": "No effect on ACBD3-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9NU19", "url": "https://www.uniprot.org/uniprotkb/Q9NU19" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9NU19-1" }, { "start_pos": 114, "end_pos": 114, "sequence_org": "S", "sequence_mut": "E", "comment": "No effect on ACBD3-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9NU19", "url": "https://www.uniprot.org/uniprotkb/Q9NU19" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9NU19-1" }, { "start_pos": 116, "end_pos": 119, "sequence_org": "STTS", "sequence_mut": "EEEE", "comment": "No effect on ACBD3-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9NU19", "url": "https://www.uniprot.org/uniprotkb/Q9NU19" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9NU19-1" }, { "start_pos": 140, "end_pos": 141, "sequence_org": "SS", "sequence_mut": "EE", "comment": "No effect on ACBD3-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9NU19", "url": "https://www.uniprot.org/uniprotkb/Q9NU19" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9NU19-1" }, { "start_pos": 143, "end_pos": 143, "sequence_org": "T", "sequence_mut": "E", "comment": "No effect on ACBD3-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9NU19", "url": "https://www.uniprot.org/uniprotkb/Q9NU19" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9NU19-1" }, { "start_pos": 168, "end_pos": 168, "sequence_org": "S", "sequence_mut": "E", "comment": "No effect on ACBD3-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9NU19", "url": "https://www.uniprot.org/uniprotkb/Q9NU19" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9NU19-1" }, { "start_pos": 58, "end_pos": 58, "sequence_org": "S", "sequence_mut": "E", "comment": "No effect on ACBD3-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9NU19", "url": "https://www.uniprot.org/uniprotkb/Q9NU19" }, { "database": "PubMed", "id": "23572552", "url": 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"url": "https://www.uniprot.org/uniprotkb/Q9NU19" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9NU19-1" }, { "start_pos": 99, "end_pos": 99, "sequence_org": "Q", "sequence_mut": "A", "comment": "No effect on ACBD3-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9NU19", "url": "https://www.uniprot.org/uniprotkb/Q9NU19" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9NU19-1" }, { "start_pos": 40, "end_pos": 42, "sequence_org": "LSV", "sequence_mut": "AAA", "comment": "Small decrease in ARMH3-binding. No effect on ACBD3-, nor RAB11B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9UBF8", "url": "https://www.uniprot.org/uniprotkb/Q9UBF8" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9UBF8-1" }, { "start_pos": 43, "end_pos": 45, "sequence_org": "IDP", "sequence_mut": "AAA", "comment": "Drastically decreased ACBD3-binding. No effect on ARMH3-, nor RAB11B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9UBF8", "url": "https://www.uniprot.org/uniprotkb/Q9UBF8" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9UBF8-1" }, { "start_pos": 46, "end_pos": 47, "sequence_org": "EV", "sequence_mut": "AA", "comment": "No effect on ACBD3-, ARMH3-, nor RAB11B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9UBF8", "url": "https://www.uniprot.org/uniprotkb/Q9UBF8" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9UBF8-1" }, { "start_pos": 49, "end_pos": 50, "sequence_org": "QK", "sequence_mut": "AA", "comment": "No effect on ACBD3-, ARMH3-, nor RAB11B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9UBF8", "url": "https://www.uniprot.org/uniprotkb/Q9UBF8" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9UBF8-1" }, { "start_pos": 52, "end_pos": 52, "sequence_org": "C", "sequence_mut": "A", "comment": "No effect on ACBD3-, ARMH3-, nor RAB11B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9UBF8", "url": "https://www.uniprot.org/uniprotkb/Q9UBF8" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9UBF8-1" }, { "start_pos": 53, "end_pos": 54, "sequence_org": "QE", "sequence_mut": "AA", "comment": "Drastically decreased ARMH3- and RAB11B-binding. 6-fold increase in ACBD3-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9UBF8", "url": "https://www.uniprot.org/uniprotkb/Q9UBF8" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9UBF8-1" }, { "start_pos": 55, "end_pos": 56, "sequence_org": "VL", "sequence_mut": "AA", "comment": "Drastically decreased ACBD3-binding. No effect on ARMH3-, nor RAB11B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9UBF8", "url": "https://www.uniprot.org/uniprotkb/Q9UBF8" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9UBF8-1" }, { "start_pos": 57, "end_pos": 59, "sequence_org": "EKV", "sequence_mut": "AAA", "comment": "No effect on ACBD3-, ARMH3-, nor RAB11B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9UBF8", "url": "https://www.uniprot.org/uniprotkb/Q9UBF8" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9UBF8-1" }, { "start_pos": 243, "end_pos": 243, "sequence_org": "K", "sequence_mut": "A", "comment": "No effect on PI4KB- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 244, "end_pos": 244, "sequence_org": "Q", "sequence_mut": "A", "comment": "No effect on PI4KB- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 245, "end_pos": 245, "sequence_org": "Q", "sequence_mut": "A", "comment": "No effect on PI4KB- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 246, "end_pos": 246, "sequence_org": "I", "sequence_mut": "A", "comment": "Partial loss of PI4KB- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 253, "end_pos": 253, "sequence_org": "Q", "sequence_mut": "A", "comment": "No effect on PI4KB- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 254, "end_pos": 254, "sequence_org": "T", "sequence_mut": "A", "comment": "No effect on PI4KB- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 256, "end_pos": 258, "sequence_org": "VQF", "sequence_mut": "AAA", "comment": "Loss of PI4KB-, TBC1D22A- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 257, "end_pos": 257, "sequence_org": "Q", "sequence_mut": "A", "comment": "Partial loss of PI4KB- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 258, "end_pos": 258, "sequence_org": "F", "sequence_mut": "A", "comment": "Differential effect on PI4KB- and TBC1D22B-binding, with PI4KB-binding being much more affected than TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "27009356", "url": "https://pubmed.ncbi.nlm.nih.gov/27009356" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 259, "end_pos": 259, "sequence_org": "Q", "sequence_mut": "A", "comment": "No effect on PI4KB- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 260, "end_pos": 260, "sequence_org": "Q", "sequence_mut": "A", "comment": "No effect on PI4KB- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 261, "end_pos": 261, "sequence_org": "Y", "sequence_mut": "A", "comment": "No effect on PI4KB- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 264, "end_pos": 266, "sequence_org": "QQY", "sequence_mut": "AAA", "comment": "No effect on PI4KB-, TBC1D22A- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 267, "end_pos": 269, "sequence_org": "PGN", "sequence_mut": "AAA", "comment": "Loss of PI4KB-, TBC1D22A- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 275, "end_pos": 275, "sequence_org": "I", "sequence_mut": "A", "comment": "No effect on PI4KB- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 276, "end_pos": 276, "sequence_org": "L", "sequence_mut": "A", "comment": "No effect on PI4KB- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 282, "end_pos": 285, "sequence_org": "EQHY", "sequence_mut": "AAAA", "comment": "Loss of PI4KB-, TBC1D22A- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 284, "end_pos": 284, "sequence_org": "H", "sequence_mut": "A", "comment": "Almost complete loss of PI4KB- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "27009356", "url": "https://pubmed.ncbi.nlm.nih.gov/27009356" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 285, "end_pos": 285, "sequence_org": "Y", "sequence_mut": "A", "comment": "Differential loss of PI4KB- and TBC1D22B-binding, with PI4KB-binding being much more affected than TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "27009356", "url": "https://pubmed.ncbi.nlm.nih.gov/27009356" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 286, "end_pos": 286, "sequence_org": "Q", "sequence_mut": "A", "comment": "No effect on PI4KB- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 287, "end_pos": 287, "sequence_org": "Q", "sequence_mut": "A", "comment": "No effect on PI4KB- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 288, "end_pos": 288, "sequence_org": "Y", "sequence_mut": "A", "comment": "Almost complete loss of PI4KB- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "27009356", "url": "https://pubmed.ncbi.nlm.nih.gov/27009356" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 344, "end_pos": 345, "sequence_org": "SS", "sequence_mut": "AA", "comment": "No effect on PI4KB-, TBC1D22A- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 414, "end_pos": 416, "sequence_org": "SYL", "sequence_mut": "AAA", "comment": "No effect on PI4KB-, TBC1D22A- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 417, "end_pos": 420, "sequence_org": "FWEF", "sequence_mut": "AAAA", "comment": "No effect on PI4KB-, TBC1D22A- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 433, "end_pos": 435, "sequence_org": "FEW", "sequence_mut": "AAA", "comment": "No effect on PI4KB-, TBC1D22A- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 494, "end_pos": 496, "sequence_org": "GSH", "sequence_mut": "AAA", "comment": "No effect on PI4KB-, TBC1D22A- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 511, "end_pos": 511, "sequence_org": "S", "sequence_mut": "A", "comment": "Partial loss of PI4KB- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 511, "end_pos": 513, "sequence_org": "SYS", "sequence_mut": "AAA", "comment": "No effect on PI4KB-, TBC1D22A- and TBC1D22B-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9H3P7", "url": "https://www.uniprot.org/uniprotkb/Q9H3P7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q9H3P7-1" }, { "start_pos": 101, "end_pos": 102, "sequence_org": "VL", "sequence_mut": "AA", "comment": "Drastically decreased ACBD3-binding. No effect on binding to 14-3-3 protein.", "evidence": [ { "database": "UniProtKB", "id": "Q8WUA7", "url": "https://www.uniprot.org/uniprotkb/Q8WUA7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q8WUA7-1" }, { "start_pos": 103, "end_pos": 105, "sequence_org": "RNH", "sequence_mut": "AAA", "comment": "No effect on ACBD3-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q8WUA7", "url": "https://www.uniprot.org/uniprotkb/Q8WUA7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q8WUA7-1" }, { "start_pos": 132, "end_pos": 132, "sequence_org": "S", "sequence_mut": "A", "comment": "No effect on 14-3-3 protein-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q8WUA7", "url": "https://www.uniprot.org/uniprotkb/Q8WUA7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q8WUA7-1" }, { "start_pos": 149, "end_pos": 150, "sequence_org": "TS", "sequence_mut": "EE", "comment": "Decreased 14-3-3 protein-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q8WUA7", "url": "https://www.uniprot.org/uniprotkb/Q8WUA7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q8WUA7-1" }, { "start_pos": 165, "end_pos": 165, "sequence_org": "S", "sequence_mut": "A", "comment": "No effect on interaction with ACBD3. Decreased 14-3-3 protein-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q8WUA7", "url": "https://www.uniprot.org/uniprotkb/Q8WUA7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q8WUA7-1" }, { "start_pos": 165, "end_pos": 165, "sequence_org": "S", "sequence_mut": "E", "comment": "Complete loss of 14-3-3 protein-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q8WUA7", "url": "https://www.uniprot.org/uniprotkb/Q8WUA7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } ], "uniprot_canonical_ac": "Q8WUA7-1" }, { "start_pos": 165, "end_pos": 167, "sequence_org": "SQS", "sequence_mut": "AQA", "comment": "Complete loss of 14-3-3 protein-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q8WUA7", "url": "https://www.uniprot.org/uniprotkb/Q8WUA7" }, { "database": "PubMed", "id": "23572552", "url": "https://pubmed.ncbi.nlm.nih.gov/23572552" } 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"id": "31519766", "url": "https://pubmed.ncbi.nlm.nih.gov/31519766" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5T2E6-1", "protein_name": "Armadillo-like helical domain-containing protein 3", "gene_name": "ARMH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92538-4", "protein_name": "Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1", "gene_name": "GBF1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q5T2E6", "url": "https://www.uniprot.org/uniprotkb/Q5T2E6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.31519766", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ 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Neurol.", "date": "2006", "authors": "Maljevic Snezana, Krampfl Klaus, Cobilanschi Joana, Tilgen Nikola, Beyer Susanne, Weber Yvonne G, Schlesinger Friedrich, Ursu Daniel, Melzer Werner, Cossette Patrick, Bufler Johannes, Lerche Holger, Heils Armin", "reference": { "type": "PubMed", "id": "16718694", "url": "https://pubmed.ncbi.nlm.nih.gov/16718694" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P14867-1", "protein_name": "Gamma-aminobutyric acid receptor subunit alpha-1", "gene_name": "GABRA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P14867", "url": "https://www.uniprot.org/uniprotkb/P14867" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16718694", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]