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Part A", "date": "2019", "authors": "Maltese PE, Michelini S, Ricci M, Maitz S, Fiorentino A, Serrani R, Lazzerotti A, Bruson A, Paolacci S, Benedetti S, Bertelli M", "reference": { "type": "PubMed", "id": "31215153", "url": "https://pubmed.ncbi.nlm.nih.gov/31215153" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NYQ6-1", "protein_name": "Cadherin EGF LAG seven-pass G-type receptor 1", "gene_name": "CELSR1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NYQ6", "url": "https://www.uniprot.org/uniprotkb/Q9NYQ6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.31215153", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Rieger-Fackeldey Esther, Ortiz Javier U, van Duinen Sjoerd G, Klein Willemijn M, Witlox Ruben S G M, Finnell Richard H, Santen Gijs W E, Lei Yunping, Suerink Manon", "reference": { "type": "PubMed", "id": "38272662", "url": "https://pubmed.ncbi.nlm.nih.gov/38272662" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NYQ6-1", "protein_name": "Cadherin EGF LAG seven-pass G-type receptor 1", "gene_name": "CELSR1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NYQ6", "url": "https://www.uniprot.org/uniprotkb/Q9NYQ6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38272662", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Impaired Wnt/Planar Cell Polarity Signaling in Yellow Nail Syndrome.", "journal": "Annals of internal medicine", "date": "2025-01", "authors": "Kurolap Alina, Chai Gadot Chofit, Eshach Adiv Orly, Hershkovitz Tova, Avitan-Hersh Emily, Martin Ludovic, Humeau Helene, Schatz Ulrich A, Westphal Dominik S, Lobmaier Silvia, Sofrin-Drucker Efrat, Stafler Patrick, Bugis Joshua, Chermesh Irit, Hardak Emilia, Geva Polina, Zohar Yaniv, Hershkovitz Dov, Mory Adi, Chatterji Sumit, Greenberger Shoshana, Shteinberg Michal, Baris Feldman Hagit", "reference": { "type": "PubMed", "id": "39715557", "url": "https://pubmed.ncbi.nlm.nih.gov/39715557" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NYQ6-1", "protein_name": "Cadherin EGF LAG seven-pass G-type receptor 1", "gene_name": "CELSR1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NYQ6", "url": "https://www.uniprot.org/uniprotkb/Q9NYQ6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.39715557", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Loss of function of def selectively up-regulates Delta113p53 expression to arrest expansion growth of digestive organs in zebrafish.", "journal": "Genes & development", "date": "2005", "authors": "Chen J, Ruan H, Ng SM, Gao C, Soo HM, Wu W, Zhang Z, Wen Z, Lane DP, Peng J", "reference": { "type": "PubMed", "id": "16322560", "url": "https://pubmed.ncbi.nlm.nih.gov/16322560" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q68CQ4-1", "protein_name": "U3 small nucleolar RNA-associated protein 25 homolog", "gene_name": "UTP25", "tax_name": "Human" }, { "uniprot_canonical_ac": "F1Q5B5-1", "protein_name": "Alkaline phosphatase", "gene_name": "alpl", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q6PEH4-1", "protein_name": "U3 small nucleolar RNA-associated protein 25 homolog", "gene_name": "utp25", "tax_name": "Zebrafish" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q68CQ4", "url": "https://www.uniprot.org/uniprotkb/Q68CQ4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16322560", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Def defines a conserved nucleolar pathway that leads p53 to proteasome-independent degradation.", "journal": "Cell research", "date": "2013", "authors": "Tao T, Shi H, Guan Y, Huang D, Chen Y, Lane DP, Chen J, Peng J", "reference": { "type": "PubMed", "id": "23357851", "url": "https://pubmed.ncbi.nlm.nih.gov/23357851" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q68CQ4-1", "protein_name": "U3 small nucleolar RNA-associated protein 25 homolog", "gene_name": "UTP25", "tax_name": "Human" }, { "uniprot_canonical_ac": "E9QE31-1", "protein_name": "Calpain-3", "gene_name": "capn3b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M1NYR6-1", "protein_name": "calpain-2", "gene_name": "capn8", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "P20807-1", "protein_name": "Calpain-3", "gene_name": "CAPN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PEH4-1", "protein_name": "U3 small nucleolar RNA-associated protein 25 homolog", "gene_name": "utp25", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M2BLC4-1", "protein_name": "Calpain-1 catalytic subunit", "gene_name": "capn1b", "tax_name": "Zebrafish" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q68CQ4", "url": "https://www.uniprot.org/uniprotkb/Q68CQ4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23357851", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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"total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Systematic Analysis of Human Cells Lacking ATG8 Proteins Uncovers Roles for GABARAPs and the CCZ1/MON1 Regulator C18orf8/RMC1 in Macroautophagic and Selective Autophagic Flux.", "journal": "Molecular and cellular biology", "date": "2018", "authors": "Vaites LP, Paulo JA, Huttlin EL, Harper JW", "reference": { "type": "PubMed", "id": "29038162", "url": "https://pubmed.ncbi.nlm.nih.gov/29038162" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DM3-1", "protein_name": "Regulator of MON1-CCZ1 complex", "gene_name": "RMC1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P86791", "url": "https://www.uniprot.org/uniprotkb/P86791" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.29038162", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Hagelkruys Astrid, Kellner Max J, Devignot St\u00e9phanie, Michlits Georg, Foong-Sobis Michelle, Weber Friedemann, Lauschke Volker M, Horn Moritz, Feldmann Heinz, Elling Ulrich, Penninger Josef M, Mirazimi Ali", "reference": { "type": "PubMed", "id": "37880247", "url": "https://pubmed.ncbi.nlm.nih.gov/37880247" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P86791", "url": "https://www.uniprot.org/uniprotkb/P86791" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.37880247", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Phosphorylation controls autoinhibition of cytoplasmic linker protein-170.", "journal": "Molecular biology of the cell", "date": "2010", "authors": "Lee HS, Komarova YA, Nadezhdina ES, Anjum R, Peloquin JG, Schober JM, Danciu O, van Haren J, Galjart N, Gygi SP, Akhmanova A, Borisy GG", "reference": { "type": "PubMed", "id": "20519438", "url": "https://pubmed.ncbi.nlm.nih.gov/20519438" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P30622-3", "protein_name": "CAP-Gly domain-containing linker protein 1", "gene_name": "CLIP1", "tax_name": "Human" }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Focused Analysis of Exome Sequencing Data for Rare Germline Mutations in Familial and Sporadic Lung Cancer.", "journal": "Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer", "date": "2016", "authors": "Liu Y, Kheradmand F, Davis CF, Scheurer ME, Wheeler D, Tsavachidis S, Armstrong G, Simpson C, Mandal D, Kupert E, Anderson M, You M, Xiong D, Pikielny C, Schwartz AG, Bailey-Wilson J, Gaba C, De Andrade M, Yang P, Pinney SM, Amos CI, Spitz MR", "reference": { "type": "PubMed", "id": "26762739", "url": "https://pubmed.ncbi.nlm.nih.gov/26762739" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5T655-1", "protein_name": "Cilia- and flagella-associated protein 58", "gene_name": "CFAP58", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", 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"Biallelic mutations of CFAP58 are associated with multiple morphological abnormalities of the sperm flagella.", "journal": "Clinical genetics", "date": "2021", "authors": "Sha Y, Sha Y, Liu W, Zhu X, Weng M, Zhang X, Wang Y, Zhou H", "reference": { "type": "PubMed", "id": "33314088", "url": "https://pubmed.ncbi.nlm.nih.gov/33314088" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5T655-1", "protein_name": "Cilia- and flagella-associated protein 58", "gene_name": "CFAP58", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q5T655", "url": "https://www.uniprot.org/uniprotkb/Q5T655" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.33314088", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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