[ { "title": "Covalent modifications of the ebola virus glycoprotein.", "journal": "Journal of virology", "date": "2002-12", "authors": "Jeffers Scott A, Sanders David Avram, Sanchez Anthony", "reference": { "type": "PubMed", "id": "12438572", "url": "https://pubmed.ncbi.nlm.nih.gov/12438572" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q05320-1", "protein_name": "Envelope glycoprotein", "gene_name": "GP", "tax_name": "Zaire ebolavirus" } ], "species": [ { "name": "Zaire ebolavirus (strain Mayinga-76)", "taxid": 128952, "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" } ], "common_name": "Zaire ebolavirus", "glygen_name": "Ebola (EBOV)", "reference_species": "Zaire ebolavirus (strain Mayinga-76) [128952]" } ], "mutagenesis": [ { "start_pos": 108, "end_pos": 108, "sequence_org": "C", "sequence_mut": "G", "comment": "Almost complete loss of expression of GP1 and GP2. Almost complete loss of virus capability to enter into host cell.", "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" }, { "database": "PubMed", "id": "12438572", "url": "https://pubmed.ncbi.nlm.nih.gov/12438572" } ], "uniprot_canonical_ac": "Q05320-1" }, { "start_pos": 121, "end_pos": 121, "sequence_org": "C", "sequence_mut": "G", "comment": "Reduced levels of expression of GP1 and GP2. 50% loss of virus capability to enter into host cell.", "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" }, { "database": "PubMed", "id": "12438572", "url": "https://pubmed.ncbi.nlm.nih.gov/12438572" } ], "uniprot_canonical_ac": "Q05320-1" }, { "start_pos": 135, "end_pos": 135, "sequence_org": "C", "sequence_mut": "S", "comment": "Almost complete loss of expression of GP1 and GP2. Complete loss of virus capability to enter into host cell.", "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" }, { "database": "PubMed", "id": "12438572", "url": "https://pubmed.ncbi.nlm.nih.gov/12438572" } ], "uniprot_canonical_ac": "Q05320-1" }, { "start_pos": 147, "end_pos": 147, "sequence_org": "C", "sequence_mut": "S", "comment": "Reduced levels of expression of GP1 and GP2. Almost complete loss of virus capability to enter into host cell.", "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" }, { "database": "PubMed", "id": "12438572", "url": "https://pubmed.ncbi.nlm.nih.gov/12438572" } ], "uniprot_canonical_ac": "Q05320-1" }, { "start_pos": 204, "end_pos": 204, "sequence_org": "N", "sequence_mut": "D", "comment": "No effect on GP1 and GP2 expression. No loss of virus capability to enter into host cell.", "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" }, { "database": "PubMed", "id": "12438572", "url": "https://pubmed.ncbi.nlm.nih.gov/12438572" } ], "uniprot_canonical_ac": "Q05320-1" }, { "start_pos": 238, "end_pos": 238, "sequence_org": "N", "sequence_mut": "Y", "comment": "No effect on GP1 and GP2 expression. 12% loss of virus capability to enter into host cell.", "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" }, { "database": "PubMed", "id": "12438572", "url": "https://pubmed.ncbi.nlm.nih.gov/12438572" } ], "uniprot_canonical_ac": "Q05320-1" }, { "start_pos": 257, "end_pos": 257, "sequence_org": "N", "sequence_mut": "D", "comment": "No effect on GP1 and GP2 expression. 12% loss of virus capability to enter into host cell.", "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" }, { "database": "PubMed", "id": "12438572", "url": "https://pubmed.ncbi.nlm.nih.gov/12438572" } ], "uniprot_canonical_ac": "Q05320-1" }, { "start_pos": 296, "end_pos": 296, "sequence_org": "N", "sequence_mut": "D", "comment": "No effect on GP1 and GP2 expression. 18% loss of virus capability to enter into host cell.", "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" }, { "database": "PubMed", "id": "12438572", "url": "https://pubmed.ncbi.nlm.nih.gov/12438572" } ], "uniprot_canonical_ac": "Q05320-1" }, { "start_pos": 40, "end_pos": 40, "sequence_org": "N", "sequence_mut": "D", "comment": "Induces GP1 secretion. Complete loss of virus capability to enter into host cell.", "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" }, { "database": "PubMed", "id": "12438572", "url": "https://pubmed.ncbi.nlm.nih.gov/12438572" } ], "uniprot_canonical_ac": "Q05320-1" }, { "start_pos": 511, "end_pos": 511, "sequence_org": "C", "sequence_mut": "G", "comment": "Induces GP1 secretion. Complete loss of virus capability to enter into host cell.", "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" }, { "database": "PubMed", "id": "12438572", "url": "https://pubmed.ncbi.nlm.nih.gov/12438572" } ], "uniprot_canonical_ac": "Q05320-1" }, { "start_pos": 53, "end_pos": 53, "sequence_org": "C", "sequence_mut": "G", "comment": "Induces GP1 secretion. Complete loss of virus capability to enter into host cell.", "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" }, { "database": "PubMed", "id": "12438572", "url": "https://pubmed.ncbi.nlm.nih.gov/12438572" } ], "uniprot_canonical_ac": "Q05320-1" }, { "start_pos": 556, "end_pos": 556, "sequence_org": "C", "sequence_mut": "S", "comment": "Induces GP1 secretion. Complete loss of virus capability to enter into host cell.", "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" }, { "database": "PubMed", "id": "12438572", "url": "https://pubmed.ncbi.nlm.nih.gov/12438572" } ], "uniprot_canonical_ac": "Q05320-1" }, { "start_pos": 563, "end_pos": 563, "sequence_org": "N", "sequence_mut": "D", "comment": "Reduced levels of expression of GP, GP1 and GP2. 20% loss of virus capability to enter into host cell.", "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" }, { "database": "PubMed", "id": "12438572", "url": "https://pubmed.ncbi.nlm.nih.gov/12438572" } ], "uniprot_canonical_ac": "Q05320-1" }, { "start_pos": 601, "end_pos": 601, "sequence_org": "C", "sequence_mut": "S", "comment": "Induces GP1 secretion. Complete loss of virus capability to enter into host cell.", "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" }, { "database": "PubMed", "id": "12438572", "url": "https://pubmed.ncbi.nlm.nih.gov/12438572" } ], "uniprot_canonical_ac": "Q05320-1" }, { "start_pos": 608, "end_pos": 608, "sequence_org": "C", "sequence_mut": "G", "comment": "Induces GP1 secretion. Complete loss of virus capability to enter into host cell.", "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" }, { "database": "PubMed", "id": "12438572", "url": "https://pubmed.ncbi.nlm.nih.gov/12438572" } ], "uniprot_canonical_ac": "Q05320-1" }, { "start_pos": 609, "end_pos": 609, "sequence_org": "C", "sequence_mut": "G", "comment": "Induces GP1 secretion. Complete loss of virus capability to enter into host cell.", "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" }, { "database": "PubMed", "id": "12438572", "url": "https://pubmed.ncbi.nlm.nih.gov/12438572" } ], "uniprot_canonical_ac": "Q05320-1" }, { "start_pos": 618, "end_pos": 618, "sequence_org": "N", "sequence_mut": "D", "comment": "Slightly reduced levels of expression of GP1 and GP2. No loss of virus capability to enter into host cell.", "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" }, { "database": "PubMed", "id": "12438572", "url": "https://pubmed.ncbi.nlm.nih.gov/12438572" } ], "uniprot_canonical_ac": "Q05320-1" }, { "start_pos": 670, "end_pos": 670, "sequence_org": "C", "sequence_mut": "A", "comment": "Reduced palmitoylation. No effect on GP processing and association with retrovirus particle. No loss of virus capability to enter into host cell. Loss of localization to the rafts; when associated with A-670.", "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" }, { "database": "PubMed", "id": "11877482", "url": "https://pubmed.ncbi.nlm.nih.gov/11877482" }, { "database": "PubMed", "id": "11152533", "url": "https://pubmed.ncbi.nlm.nih.gov/11152533" }, { "database": "PubMed", "id": "12438572", "url": "https://pubmed.ncbi.nlm.nih.gov/12438572" } ], "uniprot_canonical_ac": "Q05320-1" }, { "start_pos": 670, "end_pos": 670, "sequence_org": "C", "sequence_mut": "F", "comment": "Slightly reduced levels of expression of GP1 and GP2. Greatly reduced GP processing and association with retrovirus particle. 43% loss of virus capability to enter into host cell. Loss of localization to the rafts; when associated with A-672.", "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" }, { "database": "PubMed", "id": "11877482", "url": "https://pubmed.ncbi.nlm.nih.gov/11877482" }, { "database": "PubMed", "id": "11152533", "url": "https://pubmed.ncbi.nlm.nih.gov/11152533" }, { "database": "PubMed", "id": "12438572", "url": "https://pubmed.ncbi.nlm.nih.gov/12438572" } ], "uniprot_canonical_ac": "Q05320-1" }, { "start_pos": 672, "end_pos": 672, "sequence_org": "C", "sequence_mut": "A", "comment": "Reduced palmitoylation. No effect on GP processing and association with retrovirus particle. No loss of virus capability to enter into host cell.", "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" }, { "database": "PubMed", "id": "11152533", "url": "https://pubmed.ncbi.nlm.nih.gov/11152533" }, { "database": "PubMed", "id": "12438572", "url": "https://pubmed.ncbi.nlm.nih.gov/12438572" } ], "uniprot_canonical_ac": "Q05320-1" }, { "start_pos": 672, "end_pos": 672, "sequence_org": "C", "sequence_mut": "F", "comment": "Slightly reduced levels of expression of GP1 and GP2. Almost no effect on GP processing and association with retrovirus particle. 24% loss of virus capability to enter into host cell.", "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" }, { "database": "PubMed", "id": "11152533", "url": "https://pubmed.ncbi.nlm.nih.gov/11152533" }, { "database": "PubMed", "id": "12438572", "url": "https://pubmed.ncbi.nlm.nih.gov/12438572" } ], "uniprot_canonical_ac": "Q05320-1" } ], "record_id": "pubmed.12438572", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "DC-SIGN and DC-SIGNR bind ebola glycoproteins and enhance infection of macrophages and endothelial cells.", "journal": "Virology", "date": "2003", "authors": "Simmons Graham, Reeves Jacqueline D, Grogan Case C, Vandenberghe Luk H, Baribaud Fr\u00e9d\u00e9ric, Whitbeck J Charles, Burke Emily, Buchmeier Michael J, Soilleux Elizabeth J, Riley James L, Doms Robert W, Bates Paul, P\u00f6hlmann Stefan", "reference": { "type": "PubMed", "id": "12504546", "url": "https://pubmed.ncbi.nlm.nih.gov/12504546" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q05320-1", "protein_name": "Envelope glycoprotein", "gene_name": "GP", "tax_name": "Zaire ebolavirus" }, { "uniprot_canonical_ac": "Q9NNX6-1", "protein_name": "CD209 antigen", "gene_name": "CD209", "tax_name": "Human" } ], "species": [ { "name": "Zaire ebolavirus (strain Mayinga-76)", "taxid": 128952, "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" } ], "common_name": "Zaire ebolavirus", "glygen_name": "Ebola (EBOV)", "reference_species": "Zaire ebolavirus (strain Mayinga-76) [128952]" } ], "record_id": "pubmed.12504546", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", 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"Zaire ebolavirus (strain Mayinga-76) [128952]" } ], "record_id": "pubmed.1299611", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Folate receptor alpha and caveolae are not required for Ebola virus glycoprotein-mediated viral infection.", "journal": "J. Virol.", "date": "2003", "authors": "Riley J.L., Bates P., Rennekamp A.J., Simmons G., Vandenberghe L.H., Chai N.", "reference": { "type": "PubMed", "id": "14645601", "url": "https://pubmed.ncbi.nlm.nih.gov/14645601" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q05320-1", "protein_name": "Envelope glycoprotein", "gene_name": "GP", "tax_name": "Zaire ebolavirus" } ], "species": [ { "name": "Zaire ebolavirus (strain Mayinga-76)", "taxid": 128952, "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" } ], "common_name": "Zaire ebolavirus", "glygen_name": "Ebola (EBOV)", "reference_species": "Zaire ebolavirus (strain Mayinga-76) [128952]" } ], "record_id": "pubmed.14645601", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Human macrophage C-type lectin specific for galactose and N-acetylgalactosamine promotes filovirus entry.", "journal": "J. Virol.", "date": "2004", "authors": "Irimura T., Tsuiji M., Ebihara H., Feldmann H., Kawaoka Y., Morikawa A., Fujioka K., Takada A., Higashi N., Kobasa D.", "reference": { "type": "PubMed", "id": "14990712", "url": "https://pubmed.ncbi.nlm.nih.gov/14990712" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q05320-1", "protein_name": "Envelope glycoprotein", "gene_name": "GP", "tax_name": "Zaire ebolavirus" } ], "species": [ { "name": "Zaire ebolavirus (strain Mayinga-76)", "taxid": 128952, "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" } ], "common_name": "Zaire ebolavirus", "glygen_name": "Ebola (EBOV)", "reference_species": "Zaire ebolavirus (strain Mayinga-76) [128952]" } ], "record_id": "pubmed.14990712", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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"field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ebola virus glycoprotein toxicity is mediated by a dynamin-dependent protein-trafficking pathway.", "journal": "J. Virol.", "date": "2005", "authors": "Nabel G.J., Yang Z.-Y., Peterson M., Sullivan N.J., Duckers H., Kong W.-P., Nabel E.", "reference": { "type": "PubMed", "id": "15596847", "url": "https://pubmed.ncbi.nlm.nih.gov/15596847" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q05320-1", "protein_name": "Envelope glycoprotein", "gene_name": "GP", "tax_name": "Zaire ebolavirus" } ], "species": [ { "name": "Zaire ebolavirus (strain Mayinga-76)", "taxid": 128952, "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" } ], "common_name": "Zaire ebolavirus", "glygen_name": "Ebola (EBOV)", "reference_species": "Zaire ebolavirus (strain Mayinga-76) [128952]" } ], "record_id": "pubmed.15596847", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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Biol. Chem.", "date": "2006", "authors": "Li W., Choe H., Farzan M., Kuhn J.H., Bavari S., Radoshitzky S.R., Aman M.J., Nichol S.T., Warfield K.L., Guth A.C., Towner J.S., Vincent M.J.", "reference": { "type": "PubMed", "id": "16595665", "url": "https://pubmed.ncbi.nlm.nih.gov/16595665" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q05320-1", "protein_name": "Envelope glycoprotein", "gene_name": "GP", "tax_name": "Zaire ebolavirus" } ], "species": [ { "name": "Zaire ebolavirus (strain Mayinga-76)", "taxid": 128952, "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" } ], "common_name": "Zaire ebolavirus", "glygen_name": "Ebola (EBOV)", "reference_species": "Zaire ebolavirus (strain Mayinga-76) [128952]" } ], "record_id": "pubmed.16595665", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ebola virus glycoprotein GP is not cytotoxic when expressed constitutively at a moderate level.", "journal": "J. Gen. Virol.", "date": "2006", "authors": "Carbonnelle C., Volchkov V.E., Khromykh A., Dolnik O., Alazard-Dany N., Ottmann M., Reynard O., Volchkova V.", "reference": { "type": "PubMed", "id": "16603527", "url": "https://pubmed.ncbi.nlm.nih.gov/16603527" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q05320-1", "protein_name": "Envelope glycoprotein", "gene_name": "GP", "tax_name": "Zaire ebolavirus" } ], "species": [ { "name": "Zaire ebolavirus (strain Mayinga-76)", "taxid": 128952, "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" } ], "common_name": "Zaire ebolavirus", "glygen_name": "Ebola (EBOV)", "reference_species": "Zaire ebolavirus (strain Mayinga-76) [128952]" } ], "record_id": "pubmed.16603527", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The signal peptide of the ebolavirus glycoprotein influences interaction with the cellular lectins DC-SIGN and DC-SIGNR.", "journal": "J. Virol.", "date": "2006", "authors": "Hofmann H., Poehlmann S., Bates P., Gramberg T., Marzi A., Simmons G., Akhavan A., Lingappa V.R.", "reference": { "type": "PubMed", "id": "16775318", "url": "https://pubmed.ncbi.nlm.nih.gov/16775318" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q05320-1", "protein_name": "Envelope glycoprotein", "gene_name": "GP", "tax_name": "Zaire ebolavirus" } ], "species": [ { "name": "Zaire ebolavirus (strain Mayinga-76)", "taxid": 128952, "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" } ], "common_name": "Zaire ebolavirus", "glygen_name": "Ebola (EBOV)", "reference_species": "Zaire ebolavirus (strain Mayinga-76) [128952]" } ], "record_id": "pubmed.16775318", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 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{ "uniprot_canonical_ac": "Q05320-1", "protein_name": "Envelope glycoprotein", "gene_name": "GP", "tax_name": "Zaire ebolavirus" } ], "species": [ { "name": "Zaire ebolavirus (strain Mayinga-76)", "taxid": 128952, "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" } ], "common_name": "Zaire ebolavirus", "glygen_name": "Ebola (EBOV)", "reference_species": "Zaire ebolavirus (strain Mayinga-76) [128952]" } ], "record_id": "pubmed.18005986", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { 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Virol.", "date": "2010", "authors": "Okumura Atsushi, Pitha Paula M, Yoshimura Akihiko, Harty Ronald N", "reference": { "type": "PubMed", "id": "19846529", "url": "https://pubmed.ncbi.nlm.nih.gov/19846529" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q05320-1", "protein_name": "Envelope glycoprotein", "gene_name": "GP", "tax_name": "Zaire ebolavirus" }, { "uniprot_canonical_ac": "O00206-1", "protein_name": "Toll-like receptor 4", "gene_name": "TLR4", "tax_name": "Human" } ], "species": [ { "name": "Zaire ebolavirus (strain Mayinga-76)", "taxid": 128952, "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" } ], "common_name": "Zaire ebolavirus", "glygen_name": "Ebola (EBOV)", "reference_species": "Zaire ebolavirus (strain Mayinga-76) [128952]" } ], "record_id": "pubmed.19846529", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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permeability.", "journal": "PLoS pathogens", "date": "2014-11", "authors": "Escudero-P\u00e9rez Beatriz, Volchkova Valentina A, Dolnik Olga, Lawrence Philip, Volchkov Viktor E", "reference": { "type": "PubMed", "id": "25412102", "url": "https://pubmed.ncbi.nlm.nih.gov/25412102" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q05320-1", "protein_name": "Envelope glycoprotein", "gene_name": "GP", "tax_name": "Zaire ebolavirus" } ], "species": [ { "name": "Zaire ebolavirus (strain Mayinga-76)", "taxid": 128952, "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" } ], "common_name": "Zaire ebolavirus", "glygen_name": "Ebola (EBOV)", "reference_species": "Zaire ebolavirus (strain Mayinga-76) [128952]" } ], "record_id": "pubmed.25412102", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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Virol.", "date": "2016", "authors": "Kleman J.P., Thielens N.M., Gout E., Favier A.L., Ferraris O., Peyrefitte C., Reynard O., Volchkov V.", "reference": { "type": "PubMed", "id": "26984723", "url": "https://pubmed.ncbi.nlm.nih.gov/26984723" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q05320-1", "protein_name": "Envelope glycoprotein", "gene_name": "GP", "tax_name": "Zaire ebolavirus" } ], "species": [ { "name": "Zaire ebolavirus (strain Mayinga-76)", "taxid": 128952, "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" } ], "common_name": "Zaire ebolavirus", "glygen_name": "Ebola (EBOV)", "reference_species": "Zaire ebolavirus (strain Mayinga-76) [128952]" } ], "record_id": "pubmed.26984723", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Conformational changes in the Ebola virus membrane fusion machine induced by pH, Ca2+, and receptor binding.", "journal": "PLoS biology", "date": "2020-02", "authors": "Das Dibyendu Kumar, Bulow Uriel, Diehl William E, Durham Natasha D, Senjobe Fernando, Chandran Kartik, Luban Jeremy, Munro James B", "reference": { "type": "PubMed", "id": "32040508", "url": "https://pubmed.ncbi.nlm.nih.gov/32040508" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q05320-1", "protein_name": "Envelope glycoprotein", "gene_name": "GP", "tax_name": "Zaire ebolavirus" } ], "species": [ { "name": "Zaire ebolavirus (strain Mayinga-76)", "taxid": 128952, "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" } ], "common_name": "Zaire ebolavirus", "glygen_name": "Ebola (EBOV)", "reference_species": "Zaire ebolavirus (strain Mayinga-76) [128952]" } ], "record_id": 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Ilinykh Philipp A, Huang Kai, Halfmann Peter J, Cross Robert W, Borisevich Viktoriya, Agans Krystle N, Geisbert Joan B, Chennareddy Chakravarthy, Goff Arthur J, Piper Ashley E, Hui Sean, Shaffer Kelly C L, Buck Tierra, Heinrich Megan L, Branco Luis M, Crozier Ian, Holbrook Michael R, Kuhn Jens H, Kawaoka Yoshihiro, Glass Pamela J, Bukreyev Alexander, Geisbert Thomas W, Worwa Gabriella, Ahmed Rafi, Saphire Erica Ollmann", "reference": { "type": "PubMed", "id": "35303429", "url": "https://pubmed.ncbi.nlm.nih.gov/35303429" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q05320-1", "protein_name": "Envelope glycoprotein", "gene_name": "GP", "tax_name": "Zaire ebolavirus" } ], "species": [ { "name": "Zaire ebolavirus (strain Mayinga-76)", "taxid": 128952, "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" } ], "common_name": "Zaire ebolavirus", "glygen_name": "Ebola (EBOV)", "reference_species": "Zaire 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Virol.", "date": "1998", "authors": "Goni F.M., Nieva J.L., Pereira F.B., Ruiz-Arguello M.B.", "reference": { "type": "PubMed", "id": "9499027", "url": "https://pubmed.ncbi.nlm.nih.gov/9499027" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q05320-1", "protein_name": "Envelope glycoprotein", "gene_name": "GP", "tax_name": "Zaire ebolavirus" } ], "species": [ { "name": "Zaire ebolavirus (strain Mayinga-76)", "taxid": 128952, "evidence": [ { "database": "UniProtKB", "id": "Q05320", "url": "https://www.uniprot.org/uniprotkb/Q05320" } ], "common_name": "Zaire ebolavirus", "glygen_name": "Ebola (EBOV)", "reference_species": "Zaire ebolavirus (strain Mayinga-76) [128952]" } ], "record_id": "pubmed.9499027", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Biochemical and functional characterization of the Ebola virus VP24 protein: implications for a role in virus assembly and budding.", "journal": "Journal of virology", "date": "2003-02", "authors": "Han Ziying, Boshra Hani, Sunyer J Oriol, Zwiers Susan H, Paragas Jason, Harty Ronald N", "reference": { "type": "PubMed", "id": "12525613", "url": "https://pubmed.ncbi.nlm.nih.gov/12525613" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q05322-1", "protein_name": "Membrane-associated protein VP24", "gene_name": "VP24", "tax_name": "Zaire ebolavirus" } ], "species": [ { "name": "Zaire ebolavirus (strain Mayinga-76)", "taxid": 128952, "evidence": [ { "database": "UniProtKB", "id": "Q05322", "url": "https://www.uniprot.org/uniprotkb/Q05322" } ], "common_name": "Zaire ebolavirus", "glygen_name": "Ebola (EBOV)", "reference_species": "Zaire ebolavirus (strain 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"Licata Jillian M, Johnson Reed F, Han Ziying, Harty Ronald N", "reference": { "type": "PubMed", "id": "15220407", "url": "https://pubmed.ncbi.nlm.nih.gov/15220407" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q05322-1", "protein_name": "Membrane-associated protein VP24", "gene_name": "VP24", "tax_name": "Zaire ebolavirus" } ], "species": [ { "name": "Zaire ebolavirus (strain Mayinga-76)", "taxid": 128952, "evidence": [ { "database": "UniProtKB", "id": "Q05322", "url": "https://www.uniprot.org/uniprotkb/Q05322" } ], "common_name": "Zaire ebolavirus", "glygen_name": "Ebola (EBOV)", "reference_species": "Zaire ebolavirus (strain Mayinga-76) [128952]" } ], "record_id": "pubmed.15220407", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The ebola virus interferon antagonist VP24 directly binds STAT1 and has a novel, pyramidal fold.", "journal": "PLoS Pathog.", "date": "2012", "authors": "Zhang Adrianna P P, Bornholdt Zachary A, Liu Tong, Abelson Dafna M, Lee David E, Li Sheng, Woods Virgil L, Saphire Erica Ollmann", "reference": { "type": "PubMed", "id": "22383882", "url": "https://pubmed.ncbi.nlm.nih.gov/22383882" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q05322-1", "protein_name": 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128952, "evidence": [ { "database": "UniProtKB", "id": "Q05322", "url": "https://www.uniprot.org/uniprotkb/Q05322" } ], "common_name": "Zaire ebolavirus", "glygen_name": "Ebola (EBOV)", "reference_species": "Zaire ebolavirus (strain Mayinga-76) [128952]" } ], "mutagenesis": [ { "start_pos": 137, "end_pos": 137, "sequence_org": "R", "sequence_mut": "A", "comment": "More than 90% loss of interaction with host KPNA5.", "evidence": [ { "database": "UniProtKB", "id": "Q05322", "url": "https://www.uniprot.org/uniprotkb/Q05322" }, { "database": "PubMed", "id": "25121748", "url": "https://pubmed.ncbi.nlm.nih.gov/25121748" } ], "uniprot_canonical_ac": "Q05322-1" } ], "record_id": "pubmed.25121748", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Virol.", "date": "2003", "authors": "Becker S., Modrof J., Muhlberger E.", "reference": { "type": "PubMed", "id": "12584359", "url": "https://pubmed.ncbi.nlm.nih.gov/12584359" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q05323-1", "protein_name": "Transcriptional activator VP30", "gene_name": "VP30", "tax_name": "Zaire ebolavirus" } ], "species": [ { "name": "Zaire ebolavirus (strain Mayinga-76)", "taxid": 128952, "evidence": [ { "database": "UniProtKB", "id": "Q05323", "url": "https://www.uniprot.org/uniprotkb/Q05323" } ], "common_name": "Zaire ebolavirus", "glygen_name": "Ebola (EBOV)", "reference_species": "Zaire ebolavirus (strain Mayinga-76) [128952]" } ], "record_id": "pubmed.12584359", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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Virol.", "date": "2007", "authors": "Wang T., Longhi S., John S.P., Jonsson C.B., Schmaljohn C.S., Steffen S.", "reference": { "type": "PubMed", "id": "17567691", "url": "https://pubmed.ncbi.nlm.nih.gov/17567691" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q05323-1", "protein_name": "Transcriptional activator VP30", "gene_name": "VP30", "tax_name": "Zaire ebolavirus" } ], "species": [ { "name": "Zaire ebolavirus (strain Mayinga-76)", "taxid": 128952, "evidence": [ { "database": "UniProtKB", "id": "Q05323", "url": "https://www.uniprot.org/uniprotkb/Q05323" } ], "common_name": "Zaire ebolavirus", "glygen_name": "Ebola (EBOV)", "reference_species": "Zaire ebolavirus (strain Mayinga-76) [128952]" } ], "record_id": "pubmed.17567691", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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"RCN2 promotes Nasopharyngeal carcinoma progression by curbing Calcium flow and Mitochondrial apoptosis.", "journal": "Cellular oncology (Dordrecht)", "date": "2023-08", "authors": "Yao Hui, Zhang Siyu, Xie Haijing, Fan Yue, Miao Mengyu, Zhu Rui, Yuan Ling, Gu Miao, You Yiwen, You Bo", "reference": { "type": "PubMed", "id": "36952101", "url": "https://pubmed.ncbi.nlm.nih.gov/36952101" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BP92-1", "protein_name": "Reticulocalbin-2", "gene_name": "Rcn2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q14257-1", "protein_name": "Reticulocalbin-2", "gene_name": "RCN2", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BP92", "url": "https://www.uniprot.org/uniprotkb/Q8BP92" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.36952101", "abstract": "", 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C, Kedishvili N, Palczewski K, Nelson PS", "reference": { "type": "PubMed", "id": "15634683", "url": "https://pubmed.ncbi.nlm.nih.gov/15634683" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9QYF1-1", "protein_name": "Retinol dehydrogenase 11", "gene_name": "Rdh11", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9QYF1", "url": "https://www.uniprot.org/uniprotkb/Q9QYF1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15634683", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The concerted roles of FANCM and Rad52 in the protection of common fragile sites.", "journal": "Nature 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Rad52 mediates class-switch DNA recombination to IgD.", "journal": "Nature communications", "date": "2022", "authors": "Xu Y, Zhou H, Post G, Zan H, Casali P", "reference": { "type": "PubMed", "id": "35190531", "url": "https://pubmed.ncbi.nlm.nih.gov/35190531" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P43352-1", "protein_name": "DNA repair protein RAD52 homolog", "gene_name": "Rad52", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P43352", "url": "https://www.uniprot.org/uniprotkb/P43352" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.35190531", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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Res.", "date": "1994", "authors": "Muris DF, Bezzubova O, Buerstedde JM, Vreeken K, Balajee AS, Osgood CJ, Troelstra C, Hoeijmakers JH, Ostermann K, Schmidt H, et al.", "reference": { "type": "PubMed", "id": "7526206", "url": "https://pubmed.ncbi.nlm.nih.gov/7526206" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P43352-1", "protein_name": "DNA repair protein RAD52 homolog", "gene_name": "Rad52", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P43351-1", "protein_name": "DNA repair protein RAD52 homolog", "gene_name": "RAD52", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P43352", "url": "https://www.uniprot.org/uniprotkb/P43352" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.7526206", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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"https://pubmed.ncbi.nlm.nih.gov/7774919" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P43352-1", "protein_name": "DNA repair protein RAD52 homolog", "gene_name": "Rad52", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P43351-1", "protein_name": "DNA repair protein RAD52 homolog", "gene_name": "RAD52", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P43352", "url": "https://www.uniprot.org/uniprotkb/P43352" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.7774919", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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10090, "evidence": [ { "database": "UniProtKB", "id": "P43352", "url": "https://www.uniprot.org/uniprotkb/P43352" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.7829098", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", 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"RAB7L1 interacts with LRRK2 to modify intraneuronal protein sorting and Parkinson's disease risk.", "journal": "Neuron", "date": "2013", "authors": "MacLeod DA, Rhinn H, Kuwahara T, Zolin A, Di Paolo G, McCabe BD, Marder KS, Honig LS, Clark LN, Small SA, Abeliovich A", "reference": { "type": "PubMed", "id": "23395371", "url": "https://pubmed.ncbi.nlm.nih.gov/23395371" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q91YQ1-1", "protein_name": "Ras-related protein Rab-29", "gene_name": "Rab29", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q5S006-1", "protein_name": "Leucine-rich repeat serine/threonine-protein kinase 2", "gene_name": "Lrrk2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q63481-1", "protein_name": "Ras-related protein Rab-29", "gene_name": "Rab29", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q9EQH3-1", "protein_name": "Vacuolar protein sorting-associated protein 35", "gene_name": "Vps35", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96QK1-1", "protein_name": "Vacuolar protein sorting-associated protein 35", "gene_name": "VPS35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5S007-1", "protein_name": "Leucine-rich repeat serine/threonine-protein kinase 2", "gene_name": "LRRK2", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q91YQ1", "url": "https://www.uniprot.org/uniprotkb/Q91YQ1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 21, "end_pos": 21, "sequence_org": "T", "sequence_mut": "N", "comment": "Abolishes localization at trans-Golgi network (TGN) and affects the integrity of the TGN. 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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partial homology with MHC class I molecules.", "journal": "J. Biochem.", "date": "1996", "authors": "Zou Z, Nomura M, Takihara Y, Yasunaga T, Shimada K", "reference": { "type": "PubMed", "id": "8882725", "url": "https://pubmed.ncbi.nlm.nih.gov/8882725" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O08602-1", "protein_name": "Retinoic acid early-inducible protein 1-alpha", "gene_name": "Raet1a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O08603-1", "protein_name": "Retinoic acid early-inducible protein 1-beta", "gene_name": "Raet1b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O08604-1", "protein_name": "Retinoic acid early-inducible protein 1-gamma", "gene_name": "Raet1c", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O08602", "url": "https://www.uniprot.org/uniprotkb/O08602" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.8882725", "abstract": 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U.S.A.", "date": "2000", "authors": "Elliott D J, Bourgeois C F, Klink A, St\u00e9venin J, Cooke H J", "reference": { "type": "PubMed", "id": "10823932", "url": "https://pubmed.ncbi.nlm.nih.gov/10823932" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O35698-1", "protein_name": "RNA-binding motif protein, Y chromosome", "gene_name": "Rbmy", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P84104-1", "protein_name": "Serine/arginine-rich splicing factor 3", "gene_name": "Srsf3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O35326-1", "protein_name": "Serine/arginine-rich splicing factor 5", "gene_name": "Srsf5", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q3TWW8-1", "protein_name": "Serine/arginine-rich splicing factor 6", "gene_name": "Srsf6", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D0B0-1", "protein_name": "Serine/arginine-rich splicing factor 9", "gene_name": "Srsf9", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O35698", "url": "https://www.uniprot.org/uniprotkb/O35698" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.10823932", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Meiotic sex chromosome inactivation in male mice with targeted disruptions of Xist.", "journal": "J. Cell Sci.", "date": "2002", "authors": "Turner JM, Mahadevaiah SK, Elliott DJ, Garchon HJ, Pehrson JR, Jaenisch R, Burgoyne PS", "reference": { "type": "PubMed", "id": "12356914", "url": "https://pubmed.ncbi.nlm.nih.gov/12356914" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O35698-1", "protein_name": "RNA-binding motif protein, Y chromosome", "gene_name": "Rbmy", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q60990-1", "protein_name": "RNA-binding motif protein, Y chromosome, family 9", "gene_name": "Rbmyf9", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O35698", "url": "https://www.uniprot.org/uniprotkb/O35698" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.12356914", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Does Rbmy have a role in sperm development in mice?", "journal": "Cytogenet. Genome Res.", "date": "2003", "authors": "Szot M, Grigoriev V, Mahadevaiah S K, Ojarikre O A, Tour\u00e9 A, von Glasenapp E, Rattigan A, Turner J M A, Elliott D J, Burgoyne P S", "reference": { "type": "PubMed", "id": "15051956", "url": "https://pubmed.ncbi.nlm.nih.gov/15051956" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O35698-1", "protein_name": "RNA-binding motif protein, Y chromosome", "gene_name": "Rbmy", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q60990-1", "protein_name": "RNA-binding motif protein, Y chromosome, family 9", "gene_name": "Rbmyf9", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O35698", "url": "https://www.uniprot.org/uniprotkb/O35698" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15051956", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mouse homologues of the human AZF candidate gene RBM are expressed in spermatogonia and spermatids, and map to a Y chromosome deletion interval associated with a high incidence of sperm abnormalities.", "journal": "Hum. Mol. Genet.", "date": "1998", "authors": "Mahadevaiah SK, Odorisio T, Elliott DJ, Rattigan A, Szot M, Laval SH, Washburn LL, McCarrey JR, Cattanach BM, Lovell-Badge R, Burgoyne PS", "reference": { "type": "PubMed", "id": "9499427", "url": "https://pubmed.ncbi.nlm.nih.gov/9499427" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O35698-1", "protein_name": "RNA-binding motif protein, Y chromosome", "gene_name": "Rbmy", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O35698", "url": "https://www.uniprot.org/uniprotkb/O35698" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.9499427", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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