[ { "title": "Crystal structure of ARF1*Sec7 complexed with brefeldin A and its implications for the guanine nucleotide exchange mechanism.", "journal": "Mol. Cell", "date": "2003", "authors": "Mossessova Elena, Corpina Richard A, Goldberg Jonathan", "reference": { "type": "PubMed", "id": "14690595", "url": "https://pubmed.ncbi.nlm.nih.gov/14690595" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P84077-1", "protein_name": "ADP-ribosylation factor 1", "gene_name": "ARF1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P84077", "url": "https://www.uniprot.org/uniprotkb/P84077" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.14690595", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Conformational changes in human Arf1 on nucleotide exchange and deletion of membrane-binding elements.", "journal": "J. Biol. Chem.", "date": "2004", "authors": "Seidel Ronald D, Amor Juan Carlos, Kahn Richard A, Prestegard James H", "reference": { "type": "PubMed", "id": "15308674", "url": "https://pubmed.ncbi.nlm.nih.gov/15308674" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P84077-1", "protein_name": "ADP-ribosylation factor 1", "gene_name": "ARF1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P84077", "url": "https://www.uniprot.org/uniprotkb/P84077" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15308674", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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"start_pos": 183, "end_pos": 183, "sequence_org": "F", "sequence_mut": "S", "comment": "No loss of activity; 90% residual activity.", "evidence": [ { "database": "UniProtKB", "id": "Q9NZD2", "url": "https://www.uniprot.org/uniprotkb/Q9NZD2" }, { "database": "PubMed", "id": "15329726", "url": "https://pubmed.ncbi.nlm.nih.gov/15329726" } ], "uniprot_canonical_ac": "Q9NZD2-1" }, { "start_pos": 207, "end_pos": 207, "sequence_org": "Y", "sequence_mut": "L", "comment": "No loss of activity; 90-97% residual activity.", "evidence": [ { "database": "UniProtKB", "id": "Q9NZD2", "url": "https://www.uniprot.org/uniprotkb/Q9NZD2" }, { "database": "PubMed", "id": "15329726", "url": "https://pubmed.ncbi.nlm.nih.gov/15329726" } ], "uniprot_canonical_ac": "Q9NZD2-1" }, { "start_pos": 45, "end_pos": 45, "sequence_org": "I", "sequence_mut": "N", "comment": "18% decrease in activity.", "evidence": [ { "database": "UniProtKB", "id": "Q9NZD2", "url": "https://www.uniprot.org/uniprotkb/Q9NZD2" }, { 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controlled by glycolipid acyl structure.", "journal": "PLoS biology", "date": "2006", "authors": "Malinina L, Malakhova ML, Kanack AT, Lu M, Abagyan R, Brown RE, Patel DJ", "reference": { "type": "PubMed", "id": "17105344", "url": "https://pubmed.ncbi.nlm.nih.gov/17105344" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P84077-1", "protein_name": "ADP-ribosylation factor 1", "gene_name": "ARF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0FGR8-1", "protein_name": "Extended synaptotagmin-2", "gene_name": "ESYT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0FGR9-1", "protein_name": "Extended synaptotagmin-3", "gene_name": "ESYT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BSJ8-1", "protein_name": "Extended synaptotagmin-1", "gene_name": "ESYT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JA3-1", "protein_name": "Pleckstrin homology domain-containing family A member 8", "gene_name": "PLEKHA8", "tax_name": "Human" }, { 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Chem.", "date": "1991", "authors": "Kahn R A, Kern F G, Clark J, Gelmann E P, Rulka C", "reference": { "type": "PubMed", "id": "1899243", "url": "https://pubmed.ncbi.nlm.nih.gov/1899243" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P84077-1", "protein_name": "ADP-ribosylation factor 1", "gene_name": "ARF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18085-1", "protein_name": "ADP-ribosylation factor 4", "gene_name": "ARF4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P84077", "url": "https://www.uniprot.org/uniprotkb/P84077" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1899243", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 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Biol. Chem.", "date": "2011", "authors": "He J, Scott JL, Heroux A, Roy S, Lenoir M, Overduin M, Stahelin RV, Kutateladze TG", "reference": { "type": "PubMed", "id": "21454700", "url": "https://pubmed.ncbi.nlm.nih.gov/21454700" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P84077-1", "protein_name": "ADP-ribosylation factor 1", "gene_name": "ARF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HB20-1", "protein_name": "Pleckstrin homology domain-containing family A member 3", "gene_name": "PLEKHA3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P84077", "url": "https://www.uniprot.org/uniprotkb/P84077" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21454700", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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J. Med. 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Interaction of alphaPIX (ARHGEF6) with beta-parvin (PARVB) suggests an involvement of alphaPIX in integrin-mediated signaling.", "journal": "Human molecular genetics", "date": "2003", "authors": "Rosenberger G, Jantke I, Gal A, Kutsche K", "reference": { "type": "PubMed", "id": "12499396", "url": "https://pubmed.ncbi.nlm.nih.gov/12499396" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q15052-1", "protein_name": "Rho guanine nucleotide exchange factor 6", "gene_name": "ARHGEF6", "tax_name": "Human" }, { 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The first CH domain of affixin activates Cdc42 and Rac1 through alphaPIX, a Cdc42/Rac1-specific guanine nucleotide exchanging factor.", "journal": "Genes Cells", "date": "2004", "authors": "Mishima W, Suzuki A, Yamaji S, Yoshimi R, Ueda A, Kaneko T, Tanaka J, Miwa Y, Ohno S, Ishigatsubo Y", "reference": { "type": "PubMed", "id": "15005707", "url": "https://pubmed.ncbi.nlm.nih.gov/15005707" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q15052-1", "protein_name": "Rho guanine nucleotide exchange factor 6", "gene_name": "ARHGEF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15404-1", "protein_name": "Ras suppressor protein 1", "gene_name": "RSU1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48059-1", "protein_name": "LIM and senescent cell antigen-like-containing domain protein 1", "gene_name": "LIMS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVD7-1", "protein_name": "Alpha-parvin", "gene_name": "PARVA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49023-1", "protein_name": "Paxillin", "gene_name": "PXN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBI1-1", "protein_name": "Beta-parvin", "gene_name": "PARVB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12814-1", "protein_name": "Alpha-actinin-1", "gene_name": "ACTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15569-1", "protein_name": "Dual specificity testis-specific protein kinase 1", "gene_name": "TESK1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q15052", "url": "https://www.uniprot.org/uniprotkb/Q15052" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15005707", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 8 } ], "sort_fields": [ 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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Immunol.", "date": "2006", "authors": "Yoshimi R, Yamaji S, Suzuki A, Mishima W, Okamura M, Obana T, Matsuda C, Miwa Y, Ohno S, Ishigatsubo Y", "reference": { "type": "PubMed", "id": "16517730", "url": "https://pubmed.ncbi.nlm.nih.gov/16517730" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q15052-1", "protein_name": "Rho guanine nucleotide exchange factor 6", "gene_name": "ARHGEF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13418-1", "protein_name": "Scaffold protein ILK", "gene_name": "ILK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBI0-1", "protein_name": "Gamma-parvin", "gene_name": "PARVG", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q15052", "url": "https://www.uniprot.org/uniprotkb/Q15052" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16517730", "abstract": "", 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"Analysis of Expression of the ANG1, CaSR and FAK Proteins in Uterine Fibroids.", "journal": "International journal of molecular sciences", "date": "2024-06-28", "authors": "Markowska Anna, de Mezer Mateusz, Kurzawa Pawe\u0142, Bednarek Wies\u0142awa, Grybo\u015b Anna, Krzy\u017caniak Monika, Markowska Janina, Grybo\u015b Marian, \u017burawski Jakub", "reference": { "type": "PubMed", "id": "39000274", "url": "https://pubmed.ncbi.nlm.nih.gov/39000274" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q15389-1", "protein_name": "Angiopoietin-1", "gene_name": "ANGPT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41180-1", "protein_name": "Extracellular calcium-sensing receptor", "gene_name": "CASR", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q15389", "url": "https://www.uniprot.org/uniprotkb/Q15389" } ], "common_name": "Human", "glygen_name": "Human", 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"journal": "Cell metabolism", "date": "2018-12-04", "authors": "Gonzalez-Duque Sergio, Azoury Marie Eliane, Colli Maikel L, Afonso Georgia, Turatsinze Jean-Valery, Nigi Laura, Lalanne Ana Ines, Sebastiani Guido, Carr\u00e9 Alexia, Pinto Sheena, Culina Slobodan, Corcos No\u00e9mie, Bugliani Marco, Marchetti Piero, Armanet Mathieu, Diedisheim Marc, Kyewski Bruno, Steinmetz Lars M, Buus S\u00f8ren, You Sylvaine, Dubois-Laforgue Daniele, Larger Etienne, Beressi Jean-Paul, Bruno Graziella, Dotta Francesco, Scharfmann Raphael, Eizirik Decio L, Verdier Yann, Vinh Joelle, Mallone Roberto", "reference": { "type": "PubMed", "id": "30078552", "url": "https://pubmed.ncbi.nlm.nih.gov/30078552" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q16352-1", "protein_name": "Alpha-internexin", "gene_name": "INA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": 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"uniprot_canonical_ac": "Q969E3-1", "protein_name": "Urocortin-3", "gene_name": "UCN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75973-1", "protein_name": "C1q-related factor", "gene_name": "C1QL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UW7-1", "protein_name": "Calcium-dependent secretion activator 2", "gene_name": "CADPS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P80370-1", "protein_name": "Protein delta homolog 1", "gene_name": "DLK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62508-1", "protein_name": "Estrogen-related receptor gamma", "gene_name": "ESRRG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41219-1", "protein_name": "Peripherin", "gene_name": "PRPH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEV4-1", "protein_name": "Myosin-IIIa", "gene_name": "MYO3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDV5-1", "protein_name": "Glucose-dependent insulinotropic receptor", "gene_name": "GPR119", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92932-1", "protein_name": "Receptor-type tyrosine-protein phosphatase N2", "gene_name": "PTPRN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60284-1", "protein_name": "Suppression of tumorigenicity 18 protein", "gene_name": "ST18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16519-1", "protein_name": "Neuroendocrine convertase 2", "gene_name": "PCSK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13562-1", "protein_name": "Neurogenic differentiation factor 1", "gene_name": "NEUROD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LI6-1", "protein_name": "Heat shock transcription factor, Y-linked", "gene_name": "HSFY1; HSFY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16870-1", "protein_name": "Carboxypeptidase E", "gene_name": "CPE", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05060-1", "protein_name": "Secretogranin-1", "gene_name": "CHGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00425-1", "protein_name": "Insulin-like growth factor 2 mRNA-binding protein 3", "gene_name": "IGF2BP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16849-1", "protein_name": "Receptor-type tyrosine-protein phosphatase-like N", "gene_name": "PTPRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHC9-1", "protein_name": "NPC1-like intracellular cholesterol transporter 1", "gene_name": "NPC1L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08247-1", "protein_name": "Synaptophysin", "gene_name": "SYP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29120-1", "protein_name": "Neuroendocrine convertase 1", "gene_name": "PCSK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05408-1", "protein_name": "Neuroendocrine protein 7B2", "gene_name": "SCG5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q16352", "url": "https://www.uniprot.org/uniprotkb/Q16352" } ], "common_name": "Human", 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Mol. Biol.", "date": "2002", "authors": "Li Q, Zhao H, Jiang L, Che Y, Dong C, Wang L, Wang J, Liu L", "reference": { "type": "PubMed", "id": "11884129", "url": "https://pubmed.ncbi.nlm.nih.gov/11884129" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q66PJ3-8", "protein_name": "ADP-ribosylation factor-like protein 6-interacting protein 4", "gene_name": "ARL6IP4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q66PJ3", "url": "https://www.uniprot.org/uniprotkb/Q66PJ3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11884129", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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Commun.", "date": "2004", "authors": "Fujiwara H, Higuchi T, Yamada S, Hirano T, Sato Y, Nishioka Y, Yoshioka S, Tatsumi K, Ueda M, Maeda M, Fujii S", "reference": { "type": "PubMed", "id": "14706636", "url": "https://pubmed.ncbi.nlm.nih.gov/14706636" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6Q4G3-1", "protein_name": "Aminopeptidase Q", "gene_name": "LVRN", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q6Q4G3", "url": "https://www.uniprot.org/uniprotkb/Q6Q4G3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.14706636", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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[et al.]", "date": "2018", "authors": "Yamazaki M, Iwai Y, Noda K, Matsui S, Kato A, Takai H, Nakayama Y, Ogata Y", "reference": { "type": "PubMed", "id": "29282478", "url": "https://pubmed.ncbi.nlm.nih.gov/29282478" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6UX39-1", "protein_name": "Amelotin", "gene_name": "AMTN", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q6UX39", "url": "https://www.uniprot.org/uniprotkb/Q6UX39" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.29282478", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"gene_name": "AMTN", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q6UX39", "url": "https://www.uniprot.org/uniprotkb/Q6UX39" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.32160961", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Ankrd 13 family of UIM-bearing proteins regulates EGF receptor endocytosis from the plasma membrane.", "journal": "Molecular biology of the cell", "date": "2012", "authors": "Tanno H, Yamaguchi T, Goto E, Ishido S, Komada M", "reference": { "type": "PubMed", "id": "22298428", "url": "https://pubmed.ncbi.nlm.nih.gov/22298428" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6ZTN6-3", "protein_name": "Ankyrin repeat domain-containing protein 13D", "gene_name": "ANKRD13D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZ07-1", "protein_name": "Ankyrin repeat domain-containing protein 13A", "gene_name": "ANKRD13A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YJ7-1", "protein_name": "Ankyrin repeat domain-containing protein 13B", "gene_name": "ANKRD13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00533-1", "protein_name": "Epidermal 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No effect on 'Lys-63'-linked ubiquitin binding and interaction with EGFR; when associated with 527-G--A-531. Inhibits 'Lys-63'-linked ubiquitin binding; when associated with 527-G--A-531 and 557-G--A-561. Abolishes 'Lys-63'-linked ubiquitin binding and interaction with EGFR; when associated with 527-G--A-531, 557-G--A-561 and 582-G--A-586.", "evidence": [ { "database": "UniProtKB", "id": "Q8IZ07", "url": "https://www.uniprot.org/uniprotkb/Q8IZ07" }, { "database": "PubMed", "id": "22298428", "url": "https://pubmed.ncbi.nlm.nih.gov/22298428" } ], "uniprot_canonical_ac": "Q8IZ07-1" }, { "start_pos": 527, "end_pos": 531, "sequence_org": "AIQES", "sequence_mut": "GIQEA", "comment": "No effect on 'Lys-63'-linked ubiquitin binding and interaction with EGFR. No effect on 'Lys-63'-linked ubiquitin binding and interaction with EGFR; when associated with 491-G--A-495. Inhibits 'Lys-63'-linked ubiquitin binding; when associated with 557-G--A-561. Inhibits 'Lys-63'-linked ubiquitin binding; when associated with 491-G--A-495 and 557-G--A-561. Strongly inhibits 'Lys-63'-linked ubiquitin binding; when associated with 557-G--A-561 and 582-G--A-586. Abolishes 'Lys-63'-linked ubiquitin binding and interaction with EGFR; when associated with 491-G--A-495, 557-G--A-561 and 582-G--A-586.", "evidence": [ { "database": "UniProtKB", "id": "Q8IZ07", "url": "https://www.uniprot.org/uniprotkb/Q8IZ07" }, { "database": "PubMed", "id": "22298428", "url": "https://pubmed.ncbi.nlm.nih.gov/22298428" } ], "uniprot_canonical_ac": "Q8IZ07-1" }, { "start_pos": 557, "end_pos": 561, "sequence_org": "AMELS", "sequence_mut": "GMELA", "comment": "Slightly inhibits 'Lys-63'-linked ubiquitin binding and strongly inhibits interaction with EGFR. No effect on 'Lys-63'-linked ubiquitin binding and interaction with EGFR; when associated with 527-G--A-531. Inhibits 'Lys-63'-linked ubiquitin binding and interaction with EGFR; when associated with 491-G--A-495 and 527-G--A-531. Abolishes 'Lys-63'-linked ubiquitin binding and interaction with EGFR; when associated with 582-V--S-586. Abolishes 'Lys-63'-linked ubiquitin binding and interaction with EGFR; when associated with 491-G--A-495, 527-G--A-531 and 582-G--A-586.", "evidence": [ { "database": "UniProtKB", "id": "Q8IZ07", "url": "https://www.uniprot.org/uniprotkb/Q8IZ07" }, { "database": "PubMed", "id": "22298428", "url": "https://pubmed.ncbi.nlm.nih.gov/22298428" } ], "uniprot_canonical_ac": "Q8IZ07-1" }, { "start_pos": 582, "end_pos": 586, "sequence_org": "VLQLS", "sequence_mut": "GLQLA", "comment": "Abolishes 'Lys-63'-linked ubiquitin binding and strongly inhibits interaction with EGFR. Abolishes 'Lys-63'-linked ubiquitin binding and interaction with EGFR; when associated with 557-G--A-561. Strongly inhibits 'Lys-63'-linked ubiquitin binding; when associated with 527-G--A-531 and 557-G--A-561. Abolishes 'Lys-63'-linked ubiquitin binding and interaction with EGFR; when associated with 491-G--A-495, 527-G--A-531 and 557-G--A-561.", "evidence": [ { "database": "UniProtKB", "id": "Q8IZ07", "url": "https://www.uniprot.org/uniprotkb/Q8IZ07" }, { "database": "PubMed", "id": "22298428", "url": "https://pubmed.ncbi.nlm.nih.gov/22298428" } ], "uniprot_canonical_ac": "Q8IZ07-1" } ], "record_id": "pubmed.22298428", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"Lnc-PSMA8-1 activated by GEFT promotes rhabdomyosarcoma progression via upregulation of mTOR expression by sponging miR-144-3p.", "journal": "BMC cancer", "date": "2024-01-15", "authors": "Meng Lian, Shang Hao, Liu Qianqian, Li Zhenzhen, Wang Xiaomeng, Li Qianru, Li Feng, Zhao Zhenguo, Liu Chunxia", "reference": { "type": "PubMed", "id": "38225540", "url": "https://pubmed.ncbi.nlm.nih.gov/38225540" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86VW2-1", "protein_name": "Rho guanine nucleotide exchange factor 25", "gene_name": "ARHGEF25", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86VW2", "url": "https://www.uniprot.org/uniprotkb/Q86VW2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38225540", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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