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Konyalilar N, Kanashova T, Rodius S, Ballester-Lopez C, Genes Robles CM, Smirnova N, Rehberg M, Agarwal C, Krikki I, Piavaux B, Verleden SE, Vanaudenaerde B, Konigshoff M, Dittmar G, Bracke KR, Schultze JL, Watz H, Eickelberg O, Stoeger T, Burgstaller G, Tacke F, Heissmeyer V, Rinkevich Y, Bayram H, Schiller HB, Conrad M, Schneider R, Yildirim AO", "reference": { "type": "PubMed", "id": "35288557", "url": "https://pubmed.ncbi.nlm.nih.gov/35288557" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NVM4-1", "protein_name": "Protein arginine N-methyltransferase 7", "gene_name": "PRMT7", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NVM4", "url": "https://www.uniprot.org/uniprotkb/Q9NVM4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.35288557", "abstract": "", "glycosylation": [], "mutagenesis": [], 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Eriselda, Collini Valentina, Dall'Antonia Alberta, Arosio Maura, Mantovani Giovanna, Bedeschi Maria Francesca, Giavoli Claudia", "reference": { "type": "PubMed", "id": "36348013", "url": "https://pubmed.ncbi.nlm.nih.gov/36348013" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NVM4-1", "protein_name": "Protein arginine N-methyltransferase 7", "gene_name": "PRMT7", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NVM4", "url": "https://www.uniprot.org/uniprotkb/Q9NVM4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.36348013", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Crystal structure of the trimeric alpha-helical coiled-coil and the three lectin domains of human lung surfactant protein D.", "journal": "Structure (London, England : 1993)", "date": "1999", "authors": "Hakansson K, Lim NK, Hoppe 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"uniprot_canonical_ac": "P08913-1", "protein_name": "Alpha-2A adrenergic receptor", "gene_name": "ADRA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99758-1", "protein_name": "Phospholipid-transporting ATPase ABCA3", "gene_name": "ABCA3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NZK5", "url": "https://www.uniprot.org/uniprotkb/Q9NZK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10368295", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 30 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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family, is abundantly expressed in normal lung and kidney tissue and is expressed in lung adenocarcinomas.", "journal": "FEBS letters", "date": "1999", "authors": "Chuman Y, Bergman A, Ueno T, Saito S, Sakaguchi K, Alaiya AA, Franzen B, Bergman T, Arnott D, Auer G, Appella E, Jornvall H, Linder S", "reference": { "type": "PubMed", "id": "10580105", "url": "https://pubmed.ncbi.nlm.nih.gov/10580105" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95436-1", "protein_name": "Sodium-dependent phosphate transport protein 2B", "gene_name": "SLC34A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", 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Trapnell B, Glasser SW, Weaver TE", "reference": { "type": "PubMed", "id": "11278984", "url": "https://pubmed.ncbi.nlm.nih.gov/11278984" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95436-1", "protein_name": "Sodium-dependent phosphate transport protein 2B", "gene_name": "SLC34A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41231-1", "protein_name": "P2Y purinoceptor 2", "gene_name": "P2RY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P031-1", "protein_name": "Thyroid transcription factor 1-associated protein 26", "gene_name": 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astrocytic gliomas.", "journal": "Oncogene", "date": "2002", "authors": "Mueller W, Mollenhauer J, Stockhammer F, Poustka A, von Deimling A", "reference": { "type": "PubMed", "id": "12185598", "url": "https://pubmed.ncbi.nlm.nih.gov/12185598" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95436-1", "protein_name": "Sodium-dependent phosphate transport protein 2B", "gene_name": "SLC34A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41231-1", "protein_name": "P2Y purinoceptor 2", "gene_name": "P2RY2", "tax_name": "Human" }, { 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"uniprot_canonical_ac": "P18825-1", "protein_name": "Alpha-2C adrenergic receptor", "gene_name": "ADRA2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08913-1", "protein_name": "Alpha-2A adrenergic receptor", "gene_name": "ADRA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99758-1", "protein_name": "Phospholipid-transporting ATPase ABCA3", "gene_name": "ABCA3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NZK5", "url": "https://www.uniprot.org/uniprotkb/Q9NZK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12185598", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 30 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] 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"Purification, characterization and cDNA cloning of human lung surfactant protein D.", "journal": "The Biochemical journal", "date": "1992", "authors": "Lu J, Willis AC, Reid KB", "reference": { "type": "PubMed", "id": "1339284", "url": "https://pubmed.ncbi.nlm.nih.gov/1339284" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95436-1", "protein_name": "Sodium-dependent phosphate transport protein 2B", "gene_name": "SLC34A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41231-1", "protein_name": "P2Y purinoceptor 2", "gene_name": "P2RY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P031-1", "protein_name": "Thyroid transcription factor 1-associated protein 26", "gene_name": "CCDC59", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07988-1", "protein_name": "Pulmonary surfactant-associated protein B", "gene_name": "SFTPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWL1-1", "protein_name": "Pulmonary surfactant-associated protein A2", "gene_name": "SFTPA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C7M3-1", "protein_name": "Surfactant-associated protein 3", "gene_name": "SFTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWL2-1", "protein_name": "Pulmonary surfactant-associated protein A1", "gene_name": "SFTPA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UGM3-1", "protein_name": "Scavenger receptor cysteine-rich domain-containing protein DMBT1", "gene_name": "DMBT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09668-1", "protein_name": "Pro-cathepsin H", "gene_name": "CTSH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96009-1", "protein_name": "Napsin-A", "gene_name": "NAPSA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD9-1", "protein_name": "Pepsin A-5", "gene_name": "PGA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD7-1", "protein_name": "Pepsin A-4", "gene_name": "PGA3; PGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35247-1", "protein_name": "Pulmonary surfactant-associated protein D", "gene_name": "SFTPD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32927-1", "protein_name": "Cytokine receptor common subunit beta", "gene_name": "CSF2RB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11686-1", "protein_name": "Surfactant protein C", "gene_name": "SFTPC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92908-1", "protein_name": "Transcription factor GATA-6", "gene_name": "GATA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZU5-1", "protein_name": "LIM and cysteine-rich 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P18825-1", "protein_name": "Alpha-2C adrenergic receptor", "gene_name": "ADRA2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08913-1", "protein_name": "Alpha-2A adrenergic receptor", "gene_name": "ADRA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99758-1", "protein_name": "Phospholipid-transporting ATPase ABCA3", "gene_name": "ABCA3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NZK5", "url": "https://www.uniprot.org/uniprotkb/Q9NZK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1339284", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 30 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Intracellular processing of pulmonary surfactant protein B in an endosomal/lysosomal compartment.", "journal": "The American journal of physiology", "date": "1992", "authors": "Voorhout WF, Veenendaal T, Haagsman HP, Weaver TE, Whitsett JA, van Golde LM, Geuze HJ", "reference": { "type": "PubMed", "id": "1415726", "url": "https://pubmed.ncbi.nlm.nih.gov/1415726" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": 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"protein_name": "Pulmonary surfactant-associated protein D", "gene_name": "SFTPD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32927-1", "protein_name": "Cytokine receptor common subunit beta", "gene_name": "CSF2RB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11686-1", "protein_name": "Surfactant protein C", "gene_name": "SFTPC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92908-1", "protein_name": "Transcription factor GATA-6", "gene_name": "GATA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZU5-1", "protein_name": "LIM and cysteine-rich domains protein 1", "gene_name": "LMCD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZF2-1", "protein_name": "Adhesion G protein-coupled receptor F5", "gene_name": "ADGRF5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15509-1", "protein_name": "Granulocyte-macrophage colony-stimulating factor receptor subunit alpha", "gene_name": "CSF2RA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15361-1", "protein_name": "Transcription termination factor 1", "gene_name": "TTF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UIJ5-1", "protein_name": "Palmitoyltransferase ZDHHC2", "gene_name": "ZDHHC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD8-1", "protein_name": "Pepsin A-3", "gene_name": "PGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29274-1", "protein_name": "Adenosine receptor A2a", "gene_name": "ADORA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29275-1", "protein_name": "Adenosine receptor A2b", "gene_name": "ADORA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18825-1", "protein_name": "Alpha-2C adrenergic receptor", "gene_name": "ADRA2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08913-1", "protein_name": "Alpha-2A adrenergic receptor", "gene_name": "ADRA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99758-1", "protein_name": "Phospholipid-transporting ATPase ABCA3", "gene_name": "ABCA3", "tax_name": "Human" } 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Human surfactant polypeptide SP-B. Disulfide bridges, C-terminal end, and peptide analysis of the airway form.", "journal": "FEBS letters", "date": "1992", "authors": "Johansson J, Jornvall H, Curstedt T", "reference": { "type": "PubMed", "id": "1568474", "url": "https://pubmed.ncbi.nlm.nih.gov/1568474" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95436-1", "protein_name": "Sodium-dependent phosphate transport protein 2B", "gene_name": "SLC34A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41231-1", "protein_name": "P2Y purinoceptor 2", "gene_name": "P2RY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P031-1", "protein_name": "Thyroid transcription factor 1-associated protein 26", "gene_name": "CCDC59", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07988-1", "protein_name": "Pulmonary surfactant-associated protein B", "gene_name": "SFTPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWL1-1", "protein_name": "Pulmonary surfactant-associated protein A2", "gene_name": "SFTPA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C7M3-1", "protein_name": "Surfactant-associated protein 3", "gene_name": "SFTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWL2-1", "protein_name": "Pulmonary surfactant-associated protein A1", "gene_name": "SFTPA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UGM3-1", "protein_name": "Scavenger receptor cysteine-rich domain-containing protein DMBT1", "gene_name": "DMBT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09668-1", "protein_name": "Pro-cathepsin H", "gene_name": "CTSH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96009-1", "protein_name": "Napsin-A", "gene_name": "NAPSA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD9-1", "protein_name": "Pepsin A-5", "gene_name": "PGA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD7-1", "protein_name": "Pepsin A-4", "gene_name": "PGA3; PGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35247-1", "protein_name": "Pulmonary surfactant-associated protein D", "gene_name": "SFTPD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32927-1", "protein_name": "Cytokine receptor common subunit beta", "gene_name": "CSF2RB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11686-1", "protein_name": "Surfactant protein C", "gene_name": "SFTPC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92908-1", "protein_name": "Transcription factor GATA-6", "gene_name": "GATA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZU5-1", "protein_name": "LIM and cysteine-rich domains protein 1", 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J.", "date": "2005", "authors": "Zavialov AV, Engstrom A", "reference": { "type": "PubMed", "id": "15926889", "url": "https://pubmed.ncbi.nlm.nih.gov/15926889" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95436-1", "protein_name": "Sodium-dependent phosphate transport protein 2B", "gene_name": "SLC34A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41231-1", "protein_name": "P2Y purinoceptor 2", "gene_name": "P2RY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P031-1", "protein_name": "Thyroid transcription factor 1-associated 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P08913-1", "protein_name": "Alpha-2A adrenergic receptor", "gene_name": "ADRA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99758-1", "protein_name": "Phospholipid-transporting ATPase ABCA3", "gene_name": "ABCA3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NZK5", "url": "https://www.uniprot.org/uniprotkb/Q9NZK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15926889", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 30 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": 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Lung cellular and molecular physiology", "date": "2005", "authors": "Jain D, Dodia C, Fisher AB, Bates SR", "reference": { "type": "PubMed", "id": "16006481", "url": "https://pubmed.ncbi.nlm.nih.gov/16006481" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95436-1", "protein_name": "Sodium-dependent phosphate transport protein 2B", "gene_name": "SLC34A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41231-1", "protein_name": "P2Y purinoceptor 2", "gene_name": "P2RY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P031-1", "protein_name": 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[] } ] }, { "title": "Surfactant catabolism.", "journal": "Respirology (Carlton, Vic.)", "date": "2006", "authors": "Ikegami M", "reference": { "type": "PubMed", "id": "16423266", "url": "https://pubmed.ncbi.nlm.nih.gov/16423266" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95436-1", "protein_name": "Sodium-dependent phosphate transport protein 2B", "gene_name": "SLC34A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41231-1", "protein_name": "P2Y purinoceptor 2", "gene_name": "P2RY2", "tax_name": "Human" }, { "uniprot_canonical_ac": 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[] } ] }, { "title": "Regulation of surfactant secretion in alveolar type II cells.", "journal": "American journal of physiology. Lung cellular and molecular physiology", "date": "2007", "authors": "Andreeva AV, Kutuzov MA, Voyno-Yasenetskaya TA", "reference": { "type": "PubMed", "id": "17496061", "url": "https://pubmed.ncbi.nlm.nih.gov/17496061" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95436-1", "protein_name": "Sodium-dependent phosphate transport protein 2B", "gene_name": "SLC34A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41231-1", "protein_name": "P2Y purinoceptor 2", "gene_name": "P2RY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P031-1", "protein_name": "Thyroid transcription factor 1-associated protein 26", "gene_name": "CCDC59", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07988-1", "protein_name": "Pulmonary surfactant-associated protein B", "gene_name": "SFTPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWL1-1", "protein_name": "Pulmonary surfactant-associated protein A2", "gene_name": "SFTPA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C7M3-1", "protein_name": "Surfactant-associated protein 3", "gene_name": "SFTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWL2-1", "protein_name": "Pulmonary surfactant-associated protein A1", "gene_name": "SFTPA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UGM3-1", "protein_name": "Scavenger receptor cysteine-rich domain-containing protein DMBT1", "gene_name": "DMBT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09668-1", "protein_name": "Pro-cathepsin H", "gene_name": "CTSH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96009-1", "protein_name": "Napsin-A", "gene_name": "NAPSA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD9-1", "protein_name": "Pepsin A-5", "gene_name": "PGA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD7-1", "protein_name": "Pepsin A-4", "gene_name": "PGA3; PGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35247-1", "protein_name": "Pulmonary surfactant-associated protein D", "gene_name": "SFTPD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32927-1", "protein_name": "Cytokine receptor common subunit beta", "gene_name": "CSF2RB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11686-1", "protein_name": "Surfactant protein C", "gene_name": "SFTPC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92908-1", "protein_name": "Transcription factor GATA-6", "gene_name": "GATA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZU5-1", "protein_name": "LIM and cysteine-rich domains protein 1", "gene_name": "LMCD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZF2-1", "protein_name": "Adhesion G protein-coupled receptor F5", "gene_name": "ADGRF5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15509-1", "protein_name": "Granulocyte-macrophage colony-stimulating factor receptor subunit alpha", "gene_name": "CSF2RA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15361-1", "protein_name": "Transcription termination factor 1", "gene_name": "TTF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UIJ5-1", "protein_name": "Palmitoyltransferase ZDHHC2", "gene_name": "ZDHHC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD8-1", "protein_name": "Pepsin A-3", "gene_name": "PGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29274-1", "protein_name": "Adenosine receptor A2a", "gene_name": "ADORA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29275-1", "protein_name": "Adenosine receptor A2b", "gene_name": "ADORA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18825-1", "protein_name": "Alpha-2C adrenergic receptor", "gene_name": "ADRA2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08913-1", "protein_name": "Alpha-2A adrenergic receptor", "gene_name": "ADRA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99758-1", "protein_name": "Phospholipid-transporting ATPase ABCA3", "gene_name": "ABCA3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NZK5", "url": "https://www.uniprot.org/uniprotkb/Q9NZK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17496061", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 30 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Human surfactant protein D: SP-D contains a C-type lectin carbohydrate recognition domain.", "journal": "Archives of biochemistry and biophysics", "date": "1991", "authors": "Rust K, Grosso L, Zhang V, Chang D, Persson A, Longmore W, Cai GZ, Crouch E", "reference": { "type": "PubMed", "id": "1898081", "url": "https://pubmed.ncbi.nlm.nih.gov/1898081" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95436-1", "protein_name": "Sodium-dependent phosphate transport protein 2B", "gene_name": "SLC34A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", 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"protein_name": "Pulmonary surfactant-associated protein A1", "gene_name": "SFTPA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UGM3-1", "protein_name": "Scavenger receptor cysteine-rich domain-containing protein DMBT1", "gene_name": "DMBT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09668-1", "protein_name": "Pro-cathepsin H", "gene_name": "CTSH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96009-1", "protein_name": "Napsin-A", "gene_name": "NAPSA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD9-1", "protein_name": "Pepsin A-5", "gene_name": "PGA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD7-1", "protein_name": "Pepsin A-4", "gene_name": "PGA3; PGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35247-1", "protein_name": "Pulmonary surfactant-associated protein D", "gene_name": "SFTPD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32927-1", "protein_name": "Cytokine receptor common subunit beta", "gene_name": "CSF2RB", 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"gene_name": "CSF2RA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15361-1", "protein_name": "Transcription termination factor 1", "gene_name": "TTF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UIJ5-1", "protein_name": "Palmitoyltransferase ZDHHC2", "gene_name": "ZDHHC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD8-1", "protein_name": "Pepsin A-3", "gene_name": "PGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29274-1", "protein_name": "Adenosine receptor A2a", "gene_name": "ADORA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29275-1", "protein_name": "Adenosine receptor A2b", "gene_name": "ADORA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18825-1", "protein_name": "Alpha-2C adrenergic receptor", "gene_name": "ADRA2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08913-1", "protein_name": "Alpha-2A adrenergic receptor", "gene_name": "ADRA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99758-1", "protein_name": "Phospholipid-transporting ATPase ABCA3", "gene_name": "ABCA3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NZK5", "url": "https://www.uniprot.org/uniprotkb/Q9NZK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23590306", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 31 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Essential regulation of lung surfactant homeostasis by the orphan G protein-coupled receptor GPR116.", "journal": "Cell reports", "date": "2013", "authors": "Yang MY, Hilton MB, Seaman S, Haines DC, Nagashima K, Burks CM, Tessarollo L, Ivanova PT, Brown HA, Umstead TM, Floros J, Chroneos ZC, St Croix B", "reference": { "type": "PubMed", "id": "23684610", "url": "https://pubmed.ncbi.nlm.nih.gov/23684610" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95436-1", "protein_name": "Sodium-dependent phosphate transport protein 2B", "gene_name": "SLC34A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "G5E8Q8-1", "protein_name": "Adhesion G protein-coupled receptor F5", "gene_name": "Adgrf5", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P41231-1", "protein_name": "P2Y purinoceptor 2", "gene_name": "P2RY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P031-1", "protein_name": "Thyroid transcription factor 1-associated protein 26", "gene_name": "CCDC59", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07988-1", "protein_name": "Pulmonary surfactant-associated protein B", "gene_name": "SFTPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWL1-1", "protein_name": "Pulmonary surfactant-associated protein A2", "gene_name": "SFTPA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C7M3-1", "protein_name": "Surfactant-associated protein 3", "gene_name": "SFTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWL2-1", "protein_name": "Pulmonary surfactant-associated protein A1", "gene_name": "SFTPA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UGM3-1", "protein_name": "Scavenger receptor cysteine-rich domain-containing protein DMBT1", "gene_name": "DMBT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09668-1", "protein_name": "Pro-cathepsin H", "gene_name": "CTSH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96009-1", "protein_name": "Napsin-A", "gene_name": "NAPSA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD9-1", "protein_name": "Pepsin A-5", "gene_name": "PGA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD7-1", "protein_name": "Pepsin A-4", "gene_name": "PGA3; PGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35247-1", "protein_name": "Pulmonary surfactant-associated protein D", "gene_name": "SFTPD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32927-1", "protein_name": "Cytokine receptor common subunit beta", "gene_name": "CSF2RB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11686-1", "protein_name": "Surfactant protein C", "gene_name": "SFTPC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92908-1", "protein_name": "Transcription factor GATA-6", "gene_name": "GATA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZU5-1", "protein_name": "LIM and cysteine-rich domains protein 1", "gene_name": "LMCD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZF2-1", "protein_name": "Adhesion G protein-coupled receptor F5", "gene_name": "ADGRF5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15509-1", "protein_name": "Granulocyte-macrophage colony-stimulating factor receptor subunit alpha", "gene_name": "CSF2RA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15361-1", "protein_name": "Transcription termination factor 1", "gene_name": "TTF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UIJ5-1", "protein_name": 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"sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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Ig-Hepta/GPR116 by monitoring surfactant protein D.", "journal": "PloS one", "date": "2013", "authors": "Fukuzawa T, Ishida J, Kato A, Ichinose T, Ariestanti DM, Takahashi T, Ito K, Abe J, Suzuki T, Wakana S, Fukamizu A, Nakamura N, Hirose S", "reference": { "type": "PubMed", "id": "23922714", "url": "https://pubmed.ncbi.nlm.nih.gov/23922714" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95436-1", "protein_name": "Sodium-dependent phosphate transport protein 2B", "gene_name": "SLC34A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "G5E8Q8-1", "protein_name": "Adhesion G protein-coupled receptor F5", "gene_name": "Adgrf5", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P41231-1", "protein_name": "P2Y purinoceptor 2", "gene_name": "P2RY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P031-1", "protein_name": "Thyroid transcription factor 1-associated protein 26", "gene_name": "CCDC59", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07988-1", "protein_name": "Pulmonary surfactant-associated protein B", "gene_name": "SFTPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWL1-1", "protein_name": "Pulmonary surfactant-associated protein A2", "gene_name": "SFTPA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C7M3-1", "protein_name": "Surfactant-associated protein 3", "gene_name": "SFTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWL2-1", "protein_name": "Pulmonary surfactant-associated protein A1", "gene_name": "SFTPA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UGM3-1", 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Pei W, Milner JD, Silvin C, Heller T, Chin DT, Patronas NJ, Barber JS, Lee CC, Wood GM, Ling A, Kelly SJ, Kleiner DE, Mullikin JC, Ganson NJ, Kong HH, Hambleton S, Candotti F, Quezado MM, Calvo KR, Alao H, Barham BK, Jones A, Meschia JF, Worrall BB, Kasner SE, Rich SS, Goldbach-Mansky R, Abinun M, Chalom E, Gotte AC, Punaro M, Pascual V, Verbsky JW, Torgerson TR, Singer NG, Gershon TR, Ozen S, Karadag O, Fleisher TA, Remmers EF, Burgess SM, Moir SL, Gadina M, Sood R, Hershfield MS, Boehm M, Kastner DL, Aksentijevich I", "reference": { "type": "PubMed", "id": "24552284", "url": "https://pubmed.ncbi.nlm.nih.gov/24552284" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NZK5", "url": "https://www.uniprot.org/uniprotkb/Q9NZK5" } ], "common_name": "Human", 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"authors": "Navon Elkan P, Pierce SB, Segel R, Walsh T, Barash J, Padeh S, Zlotogorski A, Berkun Y, Press JJ, Mukamel M, Voth I, Hashkes PJ, Harel L, Hoffer V, Ling E, Yalcinkaya F, Kasapcopur O, Lee MK, Klevit RE, Renbaum P, Weinberg-Shukron A, Sener EF, Schormair B, Zeligson S, Marek-Yagel D, Strom TM, Shohat M, Singer A, Rubinow A, Pras E, Winkelmann J, Tekin M, Anikster Y, King MC, Levy-Lahad E", "reference": { "type": "PubMed", "id": "24552285", "url": "https://pubmed.ncbi.nlm.nih.gov/24552285" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NZK5", "url": "https://www.uniprot.org/uniprotkb/Q9NZK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.24552285", "abstract": "", 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pepsinogens and pepsins.", "journal": "Journal of biochemistry", "date": "1989", "authors": "Athauda SB, Tanji M, Kageyama T, Takahashi K", "reference": { "type": "PubMed", "id": "2515193", "url": "https://pubmed.ncbi.nlm.nih.gov/2515193" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95436-1", "protein_name": "Sodium-dependent phosphate transport protein 2B", "gene_name": "SLC34A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41231-1", "protein_name": "P2Y purinoceptor 2", "gene_name": "P2RY2", "tax_name": "Human" }, { 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SM, Song H, Talbot WS, Tall GG, White JP, Wolfrum U, Xu L, Piao X", "reference": { "type": "PubMed", "id": "25424900", "url": "https://pubmed.ncbi.nlm.nih.gov/25424900" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95436-1", "protein_name": "Sodium-dependent phosphate transport protein 2B", "gene_name": "SLC34A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41231-1", "protein_name": "P2Y purinoceptor 2", "gene_name": "P2RY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P031-1", "protein_name": "Thyroid transcription factor 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}, { "uniprot_canonical_ac": "P0DJD8-1", "protein_name": "Pepsin A-3", "gene_name": "PGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29274-1", "protein_name": "Adenosine receptor A2a", "gene_name": "ADORA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29275-1", "protein_name": "Adenosine receptor A2b", "gene_name": "ADORA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18825-1", "protein_name": "Alpha-2C adrenergic receptor", "gene_name": "ADRA2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08913-1", "protein_name": "Alpha-2A adrenergic receptor", "gene_name": "ADRA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99758-1", "protein_name": "Phospholipid-transporting ATPase ABCA3", "gene_name": "ABCA3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NZK5", "url": "https://www.uniprot.org/uniprotkb/Q9NZK5" } ], "common_name": "Human", "glygen_name": "Human", 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Schilling J, Lau K, Benson BJ, Golden J, Hawgood S, Clements JA", "reference": { "type": "PubMed", "id": "2610270", "url": "https://pubmed.ncbi.nlm.nih.gov/2610270" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95436-1", "protein_name": "Sodium-dependent phosphate transport protein 2B", "gene_name": "SLC34A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41231-1", "protein_name": "P2Y purinoceptor 2", "gene_name": "P2RY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P031-1", "protein_name": "Thyroid transcription factor 1-associated 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"uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41231-1", "protein_name": "P2Y purinoceptor 2", "gene_name": "P2RY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P031-1", "protein_name": "Thyroid transcription factor 1-associated protein 26", "gene_name": "CCDC59", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07988-1", "protein_name": "Pulmonary surfactant-associated protein B", "gene_name": "SFTPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWL1-1", "protein_name": "Pulmonary surfactant-associated protein A2", "gene_name": "SFTPA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C7M3-1", "protein_name": "Surfactant-associated protein 3", "gene_name": "SFTA3", "tax_name": "Human" }, { 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Journal of pharmacology and experimental therapeutics", "date": "1987", "authors": "Gilfillan AM, Rooney SA", "reference": { "type": "PubMed", "id": "3037072", "url": "https://pubmed.ncbi.nlm.nih.gov/3037072" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95436-1", "protein_name": "Sodium-dependent phosphate transport protein 2B", "gene_name": "SLC34A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41231-1", "protein_name": "P2Y purinoceptor 2", "gene_name": "P2RY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P031-1", "protein_name": 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"protein_name": "Alpha-2C adrenergic receptor", "gene_name": "ADRA2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08913-1", "protein_name": "Alpha-2A adrenergic receptor", "gene_name": "ADRA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99758-1", "protein_name": "Phospholipid-transporting ATPase ABCA3", "gene_name": "ABCA3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NZK5", "url": "https://www.uniprot.org/uniprotkb/Q9NZK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.3037072", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 30 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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"protein_name": "Sodium-dependent phosphate transport protein 2B", "gene_name": "SLC34A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41231-1", "protein_name": "P2Y purinoceptor 2", "gene_name": "P2RY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P031-1", "protein_name": "Thyroid transcription factor 1-associated protein 26", "gene_name": "CCDC59", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07988-1", "protein_name": "Pulmonary surfactant-associated protein B", "gene_name": "SFTPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWL1-1", "protein_name": "Pulmonary surfactant-associated protein A2", "gene_name": "SFTPA2", "tax_name": "Human" }, { "uniprot_canonical_ac": 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Release of phosphatidylcholine in response to beta-adrenergic stimulation.", "journal": "The Journal of clinical investigation", "date": "1979", "authors": "Dobbs LG, Mason RJ", "reference": { "type": "PubMed", "id": "34631", "url": "https://pubmed.ncbi.nlm.nih.gov/34631" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95436-1", "protein_name": "Sodium-dependent phosphate transport protein 2B", "gene_name": "SLC34A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41231-1", "protein_name": "P2Y purinoceptor 2", "gene_name": "P2RY2", "tax_name": 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"gene_name": "LMCD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZF2-1", "protein_name": "Adhesion G protein-coupled receptor F5", "gene_name": "ADGRF5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15509-1", "protein_name": "Granulocyte-macrophage colony-stimulating factor receptor subunit alpha", "gene_name": "CSF2RA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15361-1", "protein_name": "Transcription termination factor 1", "gene_name": "TTF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UIJ5-1", "protein_name": "Palmitoyltransferase ZDHHC2", "gene_name": "ZDHHC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD8-1", "protein_name": "Pepsin A-3", "gene_name": "PGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29274-1", "protein_name": "Adenosine receptor A2a", "gene_name": "ADORA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29275-1", "protein_name": "Adenosine receptor A2b", "gene_name": "ADORA2B", "tax_name": "Human" }, { 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"evidence": [ { "database": "UniProtKB", "id": "Q9NZK5", "url": "https://www.uniprot.org/uniprotkb/Q9NZK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.39078537", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 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reversibly palmitoylated resident protein (p63) of an ER-Golgi intermediate compartment is related to a circulatory shock resuscitation protein.", "journal": "Journal of cell science", "date": "1993", "authors": "Schweizer A, Rohrer J, Jeno P, DeMaio A, Buchman TG, Hauri HP", "reference": { "type": "PubMed", "id": "8314870", "url": "https://pubmed.ncbi.nlm.nih.gov/8314870" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95436-1", "protein_name": "Sodium-dependent phosphate transport protein 2B", "gene_name": "SLC34A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", "tax_name": "Human" }, { 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"Human" }, { "uniprot_canonical_ac": "P09668-1", "protein_name": "Pro-cathepsin H", "gene_name": "CTSH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96009-1", "protein_name": "Napsin-A", "gene_name": "NAPSA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD9-1", "protein_name": "Pepsin A-5", "gene_name": "PGA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD7-1", "protein_name": "Pepsin A-4", "gene_name": "PGA3; PGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35247-1", "protein_name": "Pulmonary surfactant-associated protein D", "gene_name": "SFTPD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32927-1", "protein_name": "Cytokine receptor common subunit beta", "gene_name": "CSF2RB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11686-1", "protein_name": "Surfactant protein C", "gene_name": "SFTPC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92908-1", "protein_name": "Transcription factor GATA-6", "gene_name": "GATA6", "tax_name": 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"uniprot_canonical_ac": "P29275-1", "protein_name": "Adenosine receptor A2b", "gene_name": "ADORA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18825-1", "protein_name": "Alpha-2C adrenergic receptor", "gene_name": "ADRA2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08913-1", "protein_name": "Alpha-2A adrenergic receptor", "gene_name": "ADRA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99758-1", "protein_name": "Phospholipid-transporting ATPase ABCA3", "gene_name": "ABCA3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NZK5", "url": "https://www.uniprot.org/uniprotkb/Q9NZK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8314870", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 30 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Genomic organization of human surfactant protein D (SP-D). SP-D is encoded on chromosome 10q22.2-23.1.", "journal": "The Journal of biological chemistry", "date": "1993", "authors": "Crouch E, Rust K, Veile R, Donis-Keller H, Grosso L", "reference": { "type": "PubMed", "id": "8428971", "url": "https://pubmed.ncbi.nlm.nih.gov/8428971" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95436-1", "protein_name": "Sodium-dependent phosphate transport protein 2B", "gene_name": "SLC34A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41231-1", "protein_name": "P2Y purinoceptor 2", "gene_name": "P2RY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P031-1", "protein_name": "Thyroid transcription factor 1-associated protein 26", "gene_name": "CCDC59", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07988-1", "protein_name": "Pulmonary surfactant-associated protein B", "gene_name": "SFTPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWL1-1", "protein_name": "Pulmonary surfactant-associated protein A2", "gene_name": "SFTPA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C7M3-1", "protein_name": "Surfactant-associated protein 3", "gene_name": "SFTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWL2-1", "protein_name": "Pulmonary surfactant-associated protein A1", "gene_name": "SFTPA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UGM3-1", "protein_name": "Scavenger receptor cysteine-rich domain-containing protein DMBT1", "gene_name": "DMBT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09668-1", "protein_name": "Pro-cathepsin H", "gene_name": "CTSH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96009-1", "protein_name": "Napsin-A", "gene_name": "NAPSA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD9-1", "protein_name": "Pepsin A-5", "gene_name": "PGA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD7-1", "protein_name": "Pepsin A-4", "gene_name": "PGA3; PGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35247-1", "protein_name": "Pulmonary surfactant-associated protein D", "gene_name": "SFTPD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32927-1", "protein_name": "Cytokine receptor common subunit beta", "gene_name": "CSF2RB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11686-1", "protein_name": "Surfactant protein C", "gene_name": "SFTPC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92908-1", "protein_name": "Transcription factor GATA-6", "gene_name": "GATA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZU5-1", "protein_name": "LIM and cysteine-rich 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Transcription of the lung-specific surfactant protein C gene is mediated by thyroid transcription factor 1.", "journal": "The Journal of biological chemistry", "date": "1996", "authors": "Kelly SE, Bachurski CJ, Burhans MS, Glasser SW", "reference": { "type": "PubMed", "id": "8636114", "url": "https://pubmed.ncbi.nlm.nih.gov/8636114" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95436-1", "protein_name": "Sodium-dependent phosphate transport protein 2B", "gene_name": "SLC34A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41231-1", "protein_name": "P2Y purinoceptor 2", "gene_name": "P2RY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P031-1", "protein_name": "Thyroid transcription factor 1-associated protein 26", "gene_name": "CCDC59", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07988-1", "protein_name": "Pulmonary surfactant-associated protein B", "gene_name": "SFTPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWL1-1", "protein_name": "Pulmonary surfactant-associated protein A2", "gene_name": "SFTPA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C7M3-1", "protein_name": "Surfactant-associated protein 3", "gene_name": "SFTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWL2-1", "protein_name": "Pulmonary surfactant-associated protein A1", "gene_name": "SFTPA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UGM3-1", "protein_name": "Scavenger receptor cysteine-rich domain-containing protein DMBT1", "gene_name": "DMBT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09668-1", "protein_name": "Pro-cathepsin H", "gene_name": "CTSH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96009-1", "protein_name": "Napsin-A", "gene_name": "NAPSA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD9-1", "protein_name": "Pepsin A-5", "gene_name": "PGA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD7-1", "protein_name": "Pepsin A-4", "gene_name": "PGA3; PGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35247-1", "protein_name": "Pulmonary surfactant-associated protein D", "gene_name": "SFTPD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32927-1", "protein_name": "Cytokine receptor common subunit beta", "gene_name": "CSF2RB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11686-1", "protein_name": "Surfactant protein C", "gene_name": "SFTPC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92908-1", "protein_name": "Transcription factor GATA-6", "gene_name": "GATA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZU5-1", "protein_name": "LIM and cysteine-rich domains protein 1", "gene_name": "LMCD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZF2-1", "protein_name": "Adhesion G protein-coupled receptor F5", "gene_name": "ADGRF5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15509-1", "protein_name": "Granulocyte-macrophage colony-stimulating factor receptor subunit alpha", "gene_name": "CSF2RA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15361-1", "protein_name": "Transcription termination factor 1", "gene_name": "TTF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UIJ5-1", "protein_name": "Palmitoyltransferase ZDHHC2", "gene_name": "ZDHHC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD8-1", "protein_name": "Pepsin A-3", "gene_name": "PGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29274-1", "protein_name": "Adenosine receptor A2a", "gene_name": "ADORA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29275-1", "protein_name": "Adenosine receptor A2b", "gene_name": "ADORA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18825-1", "protein_name": "Alpha-2C adrenergic receptor", "gene_name": "ADRA2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08913-1", "protein_name": "Alpha-2A adrenergic receptor", "gene_name": "ADRA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99758-1", "protein_name": "Phospholipid-transporting ATPase ABCA3", "gene_name": "ABCA3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NZK5", "url": "https://www.uniprot.org/uniprotkb/Q9NZK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8636114", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 30 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Regulation of surfactant protein gene transcription.", "journal": "Biochimica et biophysica acta", "date": "1998", "authors": "Whitsett JA, Glasser SW", "reference": { "type": "PubMed", "id": "9813380", "url": "https://pubmed.ncbi.nlm.nih.gov/9813380" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZK5-1", "protein_name": "Adenosine deaminase 2", "gene_name": "ADA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95436-1", "protein_name": "Sodium-dependent phosphate transport protein 2B", "gene_name": "SLC34A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06495-1", "protein_name": "Sodium-dependent phosphate transport protein 2A", "gene_name": "SLC34A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07065-1", "protein_name": "Cytoskeleton-associated protein 4", "gene_name": "CKAP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41231-1", "protein_name": "P2Y purinoceptor 2", "gene_name": "P2RY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P031-1", "protein_name": "Thyroid transcription factor 1-associated protein 26", "gene_name": "CCDC59", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07988-1", "protein_name": "Pulmonary surfactant-associated protein B", "gene_name": "SFTPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWL1-1", "protein_name": "Pulmonary surfactant-associated protein A2", "gene_name": "SFTPA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C7M3-1", "protein_name": "Surfactant-associated protein 3", "gene_name": "SFTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWL2-1", "protein_name": "Pulmonary surfactant-associated protein A1", "gene_name": "SFTPA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UGM3-1", "protein_name": "Scavenger receptor cysteine-rich domain-containing protein DMBT1", "gene_name": "DMBT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09668-1", "protein_name": "Pro-cathepsin H", "gene_name": "CTSH", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96009-1", "protein_name": "Napsin-A", "gene_name": "NAPSA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD9-1", "protein_name": "Pepsin A-5", "gene_name": "PGA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD7-1", "protein_name": "Pepsin A-4", "gene_name": "PGA3; PGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35247-1", "protein_name": "Pulmonary surfactant-associated protein D", "gene_name": "SFTPD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32927-1", "protein_name": "Cytokine receptor common subunit beta", "gene_name": "CSF2RB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11686-1", "protein_name": "Surfactant protein C", "gene_name": "SFTPC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92908-1", "protein_name": "Transcription factor GATA-6", "gene_name": "GATA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZU5-1", "protein_name": "LIM and cysteine-rich domains protein 1", "gene_name": "LMCD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZF2-1", "protein_name": "Adhesion G protein-coupled receptor F5", "gene_name": "ADGRF5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15509-1", "protein_name": "Granulocyte-macrophage colony-stimulating factor receptor subunit alpha", "gene_name": "CSF2RA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15361-1", "protein_name": "Transcription termination factor 1", "gene_name": "TTF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UIJ5-1", "protein_name": "Palmitoyltransferase ZDHHC2", "gene_name": "ZDHHC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJD8-1", "protein_name": "Pepsin A-3", "gene_name": "PGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29274-1", "protein_name": "Adenosine receptor A2a", "gene_name": "ADORA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29275-1", "protein_name": "Adenosine receptor A2b", "gene_name": "ADORA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18825-1", "protein_name": "Alpha-2C adrenergic receptor", "gene_name": "ADRA2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08913-1", "protein_name": "Alpha-2A adrenergic receptor", "gene_name": "ADRA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99758-1", "protein_name": "Phospholipid-transporting ATPase ABCA3", "gene_name": "ABCA3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NZK5", "url": "https://www.uniprot.org/uniprotkb/Q9NZK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9813380", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 30 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"date": "2006", "authors": "Burkovics P, Szukacsov V, Unk I, Haracska L", "reference": { "type": "PubMed", "id": "16687656", "url": "https://pubmed.ncbi.nlm.nih.gov/16687656" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UBZ4-1", "protein_name": "DNA-(apurinic or apyrimidinic site) endonuclease 2", "gene_name": "APEX2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UBZ4", "url": "https://www.uniprot.org/uniprotkb/Q9UBZ4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 277, "end_pos": 277, "sequence_org": "D", "sequence_mut": "A", "comment": "Abolishes AP endodeoxyribonuclease, 3'-5' exonuclease activity and 3'-phosphodiesterase activities.", "evidence": [ { "database": "UniProtKB", "id": "Q9UBZ4", "url": "https://www.uniprot.org/uniprotkb/Q9UBZ4" }, { "database": "PubMed", "id": 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