[ { "title": "Interactions between growth factors and integrins: latent forms of transforming growth factor-beta are ligands for the integrin alphavbeta1.", "journal": "Molecular biology of the cell", "date": "1998", "authors": "Munger JS, Harpel JG, Giancotti FG, Rifkin DB", "reference": { "type": "PubMed", "id": "9725916", "url": "https://pubmed.ncbi.nlm.nih.gov/9725916" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P15502-3", "protein_name": "Elastin", "gene_name": "ELN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14766-1", "protein_name": "Latent-transforming growth factor beta-binding protein 1", "gene_name": "LTBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBX5-1", "protein_name": "Fibulin-5", "gene_name": "FBLN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS15-1", "protein_name": "Latent-transforming growth factor beta-binding protein 3", "gene_name": "LTBP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXX0-1", "protein_name": "EMILIN-2", "gene_name": "EMILIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NT22-1", "protein_name": "EMILIN-3", "gene_name": "EMILIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18084-1", "protein_name": "Integrin beta-5", "gene_name": "ITGB5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12805-1", "protein_name": "EGF-containing fibulin-like extracellular matrix protein 1", "gene_name": "EFEMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14767-1", "protein_name": "Latent-transforming growth factor beta-binding protein 2", "gene_name": "LTBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13361-1", "protein_name": "Microfibrillar-associated protein 5", "gene_name": "MFAP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6C2-1", "protein_name": "EMILIN-1", "gene_name": "EMILIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95967-1", "protein_name": "EGF-containing fibulin-like extracellular matrix protein 2", "gene_name": "EFEMP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95393-1", "protein_name": "Bone morphogenetic protein 10", "gene_name": "BMP10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55082-1", "protein_name": "Microfibril-associated glycoprotein 3", "gene_name": "MFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10600-1", "protein_name": "Transforming growth factor beta-3 proprotein", "gene_name": "TGFB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18564-1", "protein_name": "Integrin beta-6", "gene_name": "ITGB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06756-1", "protein_name": "Integrin alpha-V", "gene_name": "ITGAV", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53708-1", "protein_name": "Integrin alpha-8", "gene_name": "ITGA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05106-1", "protein_name": "Integrin beta-3", "gene_name": "ITGB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43026-1", "protein_name": "Growth/differentiation factor 5", "gene_name": "GDF5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18075-1", "protein_name": "Bone morphogenetic protein 7", "gene_name": "BMP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12643-1", "protein_name": "Bone morphogenetic protein 2", "gene_name": "BMP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12644-1", "protein_name": "Bone morphogenetic protein 4", "gene_name": "BMP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04004-1", "protein_name": "Vitronectin", "gene_name": "VTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26012-1", "protein_name": "Integrin beta-8", "gene_name": "ITGB8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N2S1-1", "protein_name": "Latent-transforming growth factor beta-binding protein 4", "gene_name": "LTBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35555-1", "protein_name": "Fibrillin-1", "gene_name": "FBN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35556-1", "protein_name": "Fibrillin-2", "gene_name": "FBN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q75N90-1", "protein_name": "Fibrillin-3", "gene_name": "FBN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55001-1", "protein_name": "Microfibrillar-associated protein 2", "gene_name": "MFAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55083-1", "protein_name": "Microfibril-associated glycoprotein 4", "gene_name": "MFAP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23142-1", "protein_name": "Fibulin-1", "gene_name": "FBLN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P98095-1", "protein_name": "Fibulin-2", "gene_name": "FBLN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01137-1", "protein_name": 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Biol. Chem.", "date": "1999", "authors": "Zhang M C, He L, Giro M, Yong S L, Tiller G E, Davidson J M", "reference": { "type": "PubMed", "id": "9873040", "url": "https://pubmed.ncbi.nlm.nih.gov/9873040" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P15502-3", "protein_name": "Elastin", "gene_name": "ELN", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P15502", "url": "https://www.uniprot.org/uniprotkb/P15502" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9873040", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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Eberhart J, Schmidt S, Wright TM, Shamah SM, O'connell S, Cowan CW, Hu L, Goldberg JL, Debant A, Corfas G, Krull CE, Greenberg ME", "reference": { "type": "PubMed", "id": "15848799", "url": "https://pubmed.ncbi.nlm.nih.gov/15848799" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P20827-1", "protein_name": "Ephrin-A1", "gene_name": "EFNA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52798-1", "protein_name": "Ephrin-A4", "gene_name": "EFNA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52803-1", "protein_name": "Ephrin-A5", "gene_name": "EFNA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61586-1", "protein_name": "Transforming protein RhoA", "gene_name": "RHOA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12774-1", "protein_name": "Rho guanine nucleotide exchange factor 5", "gene_name": "ARHGEF5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8BWA8-1", "protein_name": "Rho guanine nucleotide exchange factor 19", "gene_name": "Arhgef19", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q3U5C8-1", "protein_name": "Rho guanine nucleotide exchange factor 16", "gene_name": "Arhgef16", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q5FWH6-1", "protein_name": "Rho guanine nucleotide exchange factor 15", "gene_name": "Arhgef15", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P21709-1", "protein_name": "Ephrin type-A receptor 1", "gene_name": "EPHA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13464-1", "protein_name": "Rho-associated protein kinase 1", "gene_name": "ROCK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N5V2-1", "protein_name": "Ephexin-1", "gene_name": "NGEF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75116-1", "protein_name": "Rho-associated protein kinase 2", "gene_name": "ROCK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43921-1", "protein_name": "Ephrin-A2", "gene_name": "EFNA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54764-1", 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ephrin-A1 is a negative regulator in glioma through down-regulation of EphA2 and FAK.", "journal": "International journal of oncology", "date": "2007-04", "authors": "Liu Dong-Ping, Wang Yan, Koeffler H Phillip, Xie Dong", "reference": { "type": "PubMed", "id": "17332925", "url": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 1 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_n_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl", "mining_tool", "filter_code", "uniprot_canonical_ac" ] } ] }, { "title": "Quantitative Longitudinal Inventory of the N-Glycoproteome of Human Milk from a Single Donor Reveals the Highly Variable Repertoire and Dynamic Site-Specific Changes.", "journal": "Journal of proteome research", "date": "2020", "authors": "Zhu J, Lin YH, Dingess KA, Mank M, Stahl B, Heck AJR", "reference": { "type": "PubMed", "id": "32125861", "url": "https://pubmed.ncbi.nlm.nih.gov/32125861" }, "referenced_glycans": [ { "glytoucan_ac": "G00395TQ" }, { "glytoucan_ac": "G58596DI" }, { "glytoucan_ac": "G58598BO" }, { "glytoucan_ac": "G59536GA" }, { "glytoucan_ac": "G90093AU" }, { "glytoucan_ac": "G78502KD" }, { "glytoucan_ac": "G78790NZ" }, { "glytoucan_ac": "G79286RS" }, { "glytoucan_ac": "G79568CQ" }, { "glytoucan_ac": "G51640FO" }, { "glytoucan_ac": "G52114WE" }, { "glytoucan_ac": "G52527GH" }, { "glytoucan_ac": "G52890YB" }, { "glytoucan_ac": "G08110WX" }, { "glytoucan_ac": "G82020ZR" }, { "glytoucan_ac": "G82119TF" }, { "glytoucan_ac": "G82348BZ" }, { "glytoucan_ac": "G82463GQ" }, { "glytoucan_ac": "G82830MN" }, { "glytoucan_ac": "G83213GG" }, { "glytoucan_ac": "G83229XP" }, { "glytoucan_ac": "G41882MT" }, { "glytoucan_ac": "G42358LZ" }, { "glytoucan_ac": "G42666HT" }, { "glytoucan_ac": "G42962KI" }, { "glytoucan_ac": "G26403SG" }, { "glytoucan_ac": "G26759AS" }, { "glytoucan_ac": "G27251WT" }, { "glytoucan_ac": "G27516OE" }, { "glytoucan_ac": "G13165FV" }, { "glytoucan_ac": "G13728QT" }, { "glytoucan_ac": "G14260UH" }, { "glytoucan_ac": "G71838YU" }, { "glytoucan_ac": "G72291OX" }, { "glytoucan_ac": "G72309KR" }, { "glytoucan_ac": "G72398FA" }, { "glytoucan_ac": "G72667IM" }, { "glytoucan_ac": "G72735IY" }, { "glytoucan_ac": "G72797UR" }, { "glytoucan_ac": "G72886NH" }, { "glytoucan_ac": "G19972YZ" }, { "glytoucan_ac": "G20312EM" }, { "glytoucan_ac": "G20425TQ" }, { "glytoucan_ac": "G21290RB" }, { "glytoucan_ac": "G95977AE" }, { "glytoucan_ac": "G96416FQ" }, { "glytoucan_ac": "G96577RX" }, { "glytoucan_ac": "G65092SV" }, { "glytoucan_ac": "G65540UB" }, { "glytoucan_ac": "G66088HZ" }, { "glytoucan_ac": "G66163OV" }, { "glytoucan_ac": "G66538GV" }, { "glytoucan_ac": "G66621EA" }, { "glytoucan_ac": "G44215PV" }, { "glytoucan_ac": "G24835MQ" }, { "glytoucan_ac": "G24954UD" }, { "glytoucan_ac": "G25418HZ" }, { "glytoucan_ac": "G25451PN" }, { "glytoucan_ac": "G25637MV" }, { "glytoucan_ac": "G11629QQ" }, { "glytoucan_ac": "G11870QZ" }, { "glytoucan_ac": "G11911BT" }, { "glytoucan_ac": "G12793SR" }, { "glytoucan_ac": "G74430RZ" }, { "glytoucan_ac": "G74724QE" }, { "glytoucan_ac": "G19116TW" }, { "glytoucan_ac": "G37868ZX" }, { "glytoucan_ac": "G37881RL" }, { "glytoucan_ac": "G66676MI" }, { "glytoucan_ac": "G66760KM" }, { "glytoucan_ac": "G66766XF" }, { "glytoucan_ac": "G67506FN" }, { "glytoucan_ac": "G60145BJ" }, { "glytoucan_ac": "G60177UT" }, { "glytoucan_ac": "G90789YQ" }, { "glytoucan_ac": "G91255CS" }, { "glytoucan_ac": "G91473PK" }, { "glytoucan_ac": "G91636VS" }, { "glytoucan_ac": "G80223IX" }, { "glytoucan_ac": "G80966KZ" }, { "glytoucan_ac": "G81198YO" }, { "glytoucan_ac": "G81263BG" }, { "glytoucan_ac": "G81295CK" }, { "glytoucan_ac": "G81375TC" }, { "glytoucan_ac": "G05724UK" }, { "glytoucan_ac": "G06110VR" }, { "glytoucan_ac": "G06356OH" }, { "glytoucan_ac": "G54612UD" }, { "glytoucan_ac": "G84452RH" }, { "glytoucan_ac": "G84820NF" }, { "glytoucan_ac": "G99858XP" }, { "glytoucan_ac": "G99966GV" }, { "glytoucan_ac": "G21643DJ" }, { "glytoucan_ac": "G22140GZ" }, { "glytoucan_ac": "G22310AV" }, { "glytoucan_ac": "G22573RC" }, { "glytoucan_ac": "G22625SJ" }, { "glytoucan_ac": "G22768VO" }, { "glytoucan_ac": "G77459ND" }, { "glytoucan_ac": "G77582RK" }, { "glytoucan_ac": "G14669DU" }, { "glytoucan_ac": "G14994KB" }, { "glytoucan_ac": "G15169WU" }, { "glytoucan_ac": "G15407YE" }, { "glytoucan_ac": "G33609NS" }, { "glytoucan_ac": "G34617SM" }, { "glytoucan_ac": "G70101JE" }, { "glytoucan_ac": "G70375MX" }, { "glytoucan_ac": "G70418MS" }, { "glytoucan_ac": "G70822IO" }, { "glytoucan_ac": "G70894RY" }, { "glytoucan_ac": "G71146HJ" }, { "glytoucan_ac": "G63628AV" }, { "glytoucan_ac": "G64162JC" }, { "glytoucan_ac": "G64394MX" }, { "glytoucan_ac": "G64527OM" }, { "glytoucan_ac": "G56903ZB" }, { "glytoucan_ac": "G57818FI" }, { "glytoucan_ac": "G57888GL" }, { "glytoucan_ac": "G02030ZB" }, { "glytoucan_ac": "G02315DX" }, { "glytoucan_ac": "G02402FF" }, { "glytoucan_ac": "G02628JF" }, { "glytoucan_ac": "G03127AL" }, { "glytoucan_ac": "G93656SY" }, { "glytoucan_ac": "G93683YO" }, { "glytoucan_ac": "G94854LT" }, { "glytoucan_ac": "G08146BT" }, { "glytoucan_ac": "G50045TK" }, { "glytoucan_ac": "G50427EO" }, { "glytoucan_ac": "G51287LK" }, { "glytoucan_ac": "G51413EV" }, { "glytoucan_ac": "G29501UT" }, { "glytoucan_ac": "G86795LJ" }, { "glytoucan_ac": "G87015RU" }, { "glytoucan_ac": "G46687AB" }, { "glytoucan_ac": "G46902YN" }, { "glytoucan_ac": "G47012YE" }, { "glytoucan_ac": "G47518TP" }, { "glytoucan_ac": "G03382KH" }, { "glytoucan_ac": "G55220VL" }, { "glytoucan_ac": "G55383ZG" }, { "glytoucan_ac": "G56284ZY" }, { "glytoucan_ac": "G92081HT" }, { "glytoucan_ac": "G48414YA" }, { "glytoucan_ac": "G48584BU" }, { "glytoucan_ac": "G49874UX" }, { "glytoucan_ac": "G10039CR" }, { "glytoucan_ac": "G10256JP" }, { "glytoucan_ac": "G10773YW" }, { "glytoucan_ac": "G85228QD" }, { "glytoucan_ac": "G86226EA" }, { "glytoucan_ac": "G86234IN" }, { "glytoucan_ac": "G86408JD" }, { "glytoucan_ac": "G29880MM" }, { "glytoucan_ac": "G45495MK" }, { "glytoucan_ac": "G45883VE" }, { "glytoucan_ac": "G46241DR" }, { "glytoucan_ac": "G46524LG" }, { "glytoucan_ac": "G39064KU" }, { "glytoucan_ac": "G39188ZX" }, { "glytoucan_ac": "G39595FH" }, { "glytoucan_ac": "G23294PN" }, { "glytoucan_ac": "G23432EQ" }, { "glytoucan_ac": "G23453IV" }, { "glytoucan_ac": "G23863VK" }, { "glytoucan_ac": "G24084IV" }, { "glytoucan_ac": "G75983OB" }, { "glytoucan_ac": "G76329HL" }, { "glytoucan_ac": "G76417NN" }, { "glytoucan_ac": "G76613WN" }, { "glytoucan_ac": "G31544HA" }, { "glytoucan_ac": "G31596VW" }, { "glytoucan_ac": "G31685JQ" }, { "glytoucan_ac": "G31916IQ" }, { "glytoucan_ac": "G31936TA" }, { "glytoucan_ac": "G32332VU" }, { "glytoucan_ac": "G32550BI" }, { "glytoucan_ac": "G32814EW" }, { "glytoucan_ac": "G69834CE" }, { "glytoucan_ac": "G61937QU" }, { "glytoucan_ac": "G62837OZ" }, { "glytoucan_ac": "G49108TO" } ], "referenced_proteins": [ { "uniprot_canonical_ac": "P20827-1", "protein_name": "Ephrin-A1", "gene_name": "EFNA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01133-1", "protein_name": "Pro-epidermal growth factor", "gene_name": "EGF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49908-1", "protein_name": "Selenoprotein P", "gene_name": "SELENOP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02788-1", "protein_name": "Lactotransferrin", "gene_name": "LTF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00734-1", "protein_name": "Prothrombin", "gene_name": "F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43652-1", "protein_name": "Afamin", "gene_name": "AFM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY76-1", "protein_name": "Angiopoietin-related protein 4", "gene_name": "ANGPTL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07858-1", "protein_name": "Cathepsin B", "gene_name": "CTSB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04114-1", "protein_name": "Apolipoprotein B-100", "gene_name": "APOB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99523-1", "protein_name": "Sortilin", "gene_name": "SORT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01008-1", "protein_name": "Antithrombin-III", "gene_name": "SERPINC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10909-1", "protein_name": "Clusterin", "gene_name": "CLU", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75503-1", "protein_name": "Bis(monoacylglycero)phosphate synthase CLN5", "gene_name": "CLN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01871-2", "protein_name": "Immunoglobulin heavy constant mu", "gene_name": "IGHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02765-1", "protein_name": "Alpha-2-HS-glycoprotein", "gene_name": "AHSG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02679-1", "protein_name": "Fibrinogen gamma chain", "gene_name": "FGG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJJ9-1", "protein_name": "N-acetylglucosamine-1-phosphotransferase subunit gamma", "gene_name": "GNPTG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35475-1", "protein_name": "Alpha-L-iduronidase", "gene_name": "IDUA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08603-1", "protein_name": "Complement factor H", "gene_name": "CFH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19835-1", "protein_name": "Bile salt-activated lipase", "gene_name": "CEL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50897-1", "protein_name": "Palmitoyl-protein thioesterase 1", "gene_name": "PPT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08962-1", "protein_name": "CD63 antigen", "gene_name": "CD63", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05156-1", "protein_name": "Complement factor I", "gene_name": "CFI", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01033-1", "protein_name": "Metalloproteinase inhibitor 1", "gene_name": "TIMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75882-1", "protein_name": "Attractin", "gene_name": "ATRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07602-1", "protein_name": "Prosaposin", "gene_name": "PSAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07996-1", "protein_name": "Thrombospondin-1", "gene_name": "THBS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16671-1", "protein_name": "Platelet glycoprotein 4", "gene_name": "CD36", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00450-1", "protein_name": "Ceruloplasmin", "gene_name": "CP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C0L5-1", "protein_name": "Complement C4-B", "gene_name": "C4B_2; C4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C0L4-1", "protein_name": "Complement C4-A", "gene_name": "C4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04233-1", "protein_name": "HLA class II histocompatibility antigen gamma chain", "gene_name": "CD74", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60603-1", "protein_name": "Toll-like receptor 2", "gene_name": "TLR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92876-1", "protein_name": "Kallikrein-6", "gene_name": "KLK6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11279-1", "protein_name": "Lysosome-associated membrane glycoprotein 1", "gene_name": "LAMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43493-2", "protein_name": "Trans-Golgi network integral membrane protein 2", "gene_name": "TGOLN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UX06-1", "protein_name": "Olfactomedin-4", "gene_name": "OLFM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01833-1", "protein_name": "Polymeric immunoglobulin receptor", "gene_name": "PIGR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27169-1", "protein_name": "Serum paraoxonase/arylesterase 1", "gene_name": "PON1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H173-1", "protein_name": "Nucleotide exchange factor SIL1", "gene_name": "SIL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6X4U4-1", "protein_name": "Sclerostin domain-containing protein 1", "gene_name": "SOSTDC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05155-1", "protein_name": "Plasma protease C1 inhibitor", "gene_name": "SERPING1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04062-1", "protein_name": "Lysosomal acid glucosylceramidase", "gene_name": "GBA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99538-1", "protein_name": "Legumain", "gene_name": "LGMN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08380-1", "protein_name": "Galectin-3-binding protein", "gene_name": "LGALS3BP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01876-2", "protein_name": "Immunoglobulin heavy constant alpha 1", "gene_name": "IGHA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75888-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13", "gene_name": "TNFSF13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19652-1", "protein_name": "Alpha-1-acid glycoprotein 2", "gene_name": "ORM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02750-1", "protein_name": "Leucine-rich alpha-2-glycoprotein", "gene_name": "LRG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05090-1", "protein_name": "Apolipoprotein D", "gene_name": "APOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02749-1", "protein_name": "Beta-2-glycoprotein 1", "gene_name": "APOH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00738-1", "protein_name": "Haptoglobin", "gene_name": "HP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14786-1", "protein_name": "Neuropilin-1", "gene_name": "NRP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02675-1", "protein_name": "Fibrinogen beta chain", "gene_name": "FGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6WN34-1", "protein_name": "Chordin-like protein 2", "gene_name": "CHRDL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33176-1", "protein_name": "Kinesin-1 heavy chain", "gene_name": "KIF5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02787-1", "protein_name": "Serotransferrin", "gene_name": "TF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19440-1", "protein_name": "Glutathione hydrolase 1 proenzyme", "gene_name": "GGT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23284-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase B", "gene_name": "PPIB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45877-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase C", "gene_name": "PPIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23280-1", "protein_name": "Carbonic anhydrase 6", "gene_name": "CA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01042-1", "protein_name": "Kininogen-1", "gene_name": "KNG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZP8-1", "protein_name": "Complement C1r subcomponent-like protein", "gene_name": "C1RL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04004-1", "protein_name": "Vitronectin", "gene_name": "VTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13410-1", "protein_name": "Butyrophilin subfamily 1 member A1", "gene_name": "BTN1A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14515-1", "protein_name": "SPARC-like protein 1", "gene_name": "SPARCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22897-1", "protein_name": "Macrophage mannose receptor 1", "gene_name": "MRC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41271-1", "protein_name": "Neuroblastoma suppressor of tumorigenicity 1", "gene_name": "NBL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22079-1", "protein_name": "Lactoperoxidase", "gene_name": "LPO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05164-1", "protein_name": "Myeloperoxidase", 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Poly(U)-specific endoribonuclease ENDOU promotes translation of human CHOP mRNA by releasing uORF element-mediated inhibition.", "journal": "The EMBO journal", "date": "2021", "authors": "Lee HC, Fu CY, Lin CY, Hu JR, Huang TY, Lo KY, Tsai HY, Sheu JC, Tsai HJ", "reference": { "type": "PubMed", "id": "33511665", "url": "https://pubmed.ncbi.nlm.nih.gov/33511665" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P21128-1", "protein_name": "Uridylate-specific endoribonuclease", "gene_name": "ENDOU", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P21128", "url": "https://www.uniprot.org/uniprotkb/P21128" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.33511665", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The endoribonuclease Arlr is required to maintain lipid homeostasis by downregulating lipolytic genes during aging.", "journal": "Nature communications", "date": "2023-10-06", "authors": "Sun Xiaowei, Shen Jie, Perrimon Norbert, Kong Xue, Wang Dan", "reference": { "type": "PubMed", "id": "37803019", "url": "https://pubmed.ncbi.nlm.nih.gov/37803019" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P21128-1", "protein_name": "Uridylate-specific endoribonuclease", "gene_name": "ENDOU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9VZ49-1", "protein_name": "Endoribonuclease Arlr", "gene_name": "Arlr", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VF14-1", "protein_name": "Uridylate-specific endoribonuclease EndoU", "gene_name": "EndoU", "tax_name": "Fruit fly" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P21128", "url": "https://www.uniprot.org/uniprotkb/P21128" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.37803019", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "1H, 13C and 15N backbone resonance assignment of the calcium-activated EndoU endoribonuclease.", "journal": "Biomolecular NMR assignments", "date": "2024-12", "authors": "Malard Florian, Karginov Fedor V, Campagne S\u00e9bastien", "reference": { "type": "PubMed", "id": "39249657", "url": "https://pubmed.ncbi.nlm.nih.gov/39249657" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P21128-1", "protein_name": "Uridylate-specific endoribonuclease", "gene_name": "ENDOU", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P21128", "url": "https://www.uniprot.org/uniprotkb/P21128" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.39249657", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A new fusion gene TPM3-ALK in anaplastic large cell lymphoma created by a (1;2)(q25;p23) translocation.", "journal": "Blood", "date": "1999", "authors": "Lamant L, Dastugue N, Pulford K, Delsol G, Mariame B", "reference": { "type": "PubMed", "id": "10216106", "url": "https://pubmed.ncbi.nlm.nih.gov/10216106" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": "Ribosome-binding protein 1", "gene_name": "RRBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM73-1", "protein_name": "ALK tyrosine kinase receptor", "gene_name": "ALK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75688-1", "protein_name": "Protein phosphatase 1B", "gene_name": "PPM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14203-1", "protein_name": "Dynactin subunit 1", "gene_name": "DCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45984-1", "protein_name": "Mitogen-activated protein kinase 9", "gene_name": "MAPK9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42336-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform", "gene_name": "PIK3CA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WU20-1", "protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "FRS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00291-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "HIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86W92-1", "protein_name": "Liprin-beta-1", "gene_name": "PPFIBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWI1-1", "protein_name": "LIM domain only protein 7", "gene_name": "LMO7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06748-1", "protein_name": "Nucleophosmin", "gene_name": "NPM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43815-1", "protein_name": "Striatin", "gene_name": "STRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": "MCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29597-1", "protein_name": "Non-receptor tyrosine-protein kinase TYK2", "gene_name": "TYK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33176-1", "protein_name": "Kinesin-1 heavy chain", "gene_name": "KIF5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13501-1", "protein_name": "Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10216106", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 59 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The solution structure of the guanine nucleotide exchange domain of human elongation factor 1beta reveals a striking resemblance to that of EF-Ts from Escherichia coli.", "journal": "Structure (London, England : 1993)", "date": "1999", "authors": "Perez JM, Siegal G, Kriek J, Hard K, Dijk J, Canters GW, Moller W", "reference": { "type": "PubMed", "id": "10368288", "url": "https://pubmed.ncbi.nlm.nih.gov/10368288" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24534-1", "protein_name": "Elongation factor 1-beta", "gene_name": "EEF1B2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29692-1", "protein_name": "Elongation factor 1-delta", "gene_name": "EEF1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VTE0-1", "protein_name": "Putative elongation factor 1-alpha-like 3", "gene_name": "EEF1A1P5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68104-1", "protein_name": "Elongation factor 1-alpha 1", "gene_name": "EEF1A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q05639-1", "protein_name": "Elongation factor 1-alpha 2", "gene_name": "EEF1A2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10368288", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "TRK-fused gene (TFG) is a new partner of ALK in anaplastic large cell lymphoma producing two structurally different TFG-ALK translocations.", "journal": "Blood", "date": "1999", "authors": "Hernandez L, Pinyol M, Hernandez S, Bea S, Pulford K, Rosenwald A, Lamant L, Falini B, Ott G, Mason DY, Delsol G, Campo E", "reference": { "type": "PubMed", "id": "10556217", "url": "https://pubmed.ncbi.nlm.nih.gov/10556217" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": "Ribosome-binding protein 1", "gene_name": "RRBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM73-1", "protein_name": "ALK tyrosine kinase receptor", "gene_name": "ALK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75688-1", "protein_name": "Protein phosphatase 1B", "gene_name": "PPM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14203-1", "protein_name": "Dynactin subunit 1", "gene_name": "DCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45984-1", "protein_name": "Mitogen-activated protein kinase 9", "gene_name": "MAPK9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42336-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform", "gene_name": "PIK3CA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WU20-1", "protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "FRS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00291-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "HIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86W92-1", "protein_name": "Liprin-beta-1", "gene_name": "PPFIBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWI1-1", "protein_name": "LIM domain only protein 7", "gene_name": "LMO7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06748-1", "protein_name": "Nucleophosmin", "gene_name": "NPM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43815-1", "protein_name": "Striatin", "gene_name": "STRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": "MCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29597-1", "protein_name": "Non-receptor tyrosine-protein kinase TYK2", "gene_name": "TYK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33176-1", "protein_name": "Kinesin-1 heavy chain", "gene_name": "KIF5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13501-1", "protein_name": "Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10556217", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 59 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "ATIC-ALK: A novel variant ALK gene fusion in anaplastic large cell lymphoma resulting from the recurrent cryptic chromosomal inversion, inv(2)(p23q35).", "journal": "The American journal of pathology", "date": "2000", "authors": "Colleoni GW, Bridge JA, Garicochea B, Liu J, Filippa DA, Ladanyi M", "reference": { "type": "PubMed", "id": "10702393", "url": "https://pubmed.ncbi.nlm.nih.gov/10702393" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": "Ribosome-binding protein 1", "gene_name": "RRBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM73-1", "protein_name": "ALK tyrosine kinase receptor", "gene_name": "ALK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75688-1", "protein_name": "Protein phosphatase 1B", "gene_name": "PPM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14203-1", "protein_name": "Dynactin subunit 1", "gene_name": "DCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45984-1", "protein_name": "Mitogen-activated protein kinase 9", "gene_name": "MAPK9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42336-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform", "gene_name": "PIK3CA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WU20-1", "protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "FRS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00291-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "HIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86W92-1", "protein_name": "Liprin-beta-1", "gene_name": "PPFIBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWI1-1", "protein_name": "LIM domain only protein 7", "gene_name": "LMO7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06748-1", "protein_name": "Nucleophosmin", "gene_name": "NPM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43815-1", "protein_name": "Striatin", "gene_name": "STRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": "MCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29597-1", "protein_name": "Non-receptor tyrosine-protein kinase TYK2", "gene_name": "TYK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33176-1", "protein_name": "Kinesin-1 heavy chain", "gene_name": "KIF5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13501-1", "protein_name": "Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10702393", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 59 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A new variant anaplastic lymphoma kinase (ALK)-fusion protein (ATIC-ALK) in a case of ALK-positive anaplastic large cell lymphoma.", "journal": "Cancer research", "date": "2000", "authors": "Trinei M, Lanfrancone L, Campo E, Pulford K, Mason DY, Pelicci PG, Falini B", "reference": { "type": "PubMed", "id": "10706082", "url": "https://pubmed.ncbi.nlm.nih.gov/10706082" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": 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"gene_name": "PIK3CA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WU20-1", "protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "FRS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00291-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "HIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86W92-1", "protein_name": "Liprin-beta-1", "gene_name": "PPFIBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWI1-1", "protein_name": "LIM domain only protein 7", "gene_name": "LMO7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06748-1", "protein_name": "Nucleophosmin", "gene_name": "NPM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43815-1", "protein_name": "Striatin", "gene_name": "STRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": "MCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29597-1", "protein_name": "Non-receptor tyrosine-protein kinase TYK2", "gene_name": "TYK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33176-1", "protein_name": "Kinesin-1 heavy chain", "gene_name": "KIF5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13501-1", "protein_name": "Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": 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"uniprot_canonical_ac": "O75688-1", "protein_name": "Protein phosphatase 1B", "gene_name": "PPM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14203-1", "protein_name": "Dynactin subunit 1", "gene_name": "DCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45984-1", "protein_name": "Mitogen-activated protein kinase 9", "gene_name": "MAPK9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42336-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform", "gene_name": "PIK3CA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WU20-1", "protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "FRS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00291-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "HIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86W92-1", "protein_name": "Liprin-beta-1", "gene_name": "PPFIBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWI1-1", "protein_name": "LIM domain only protein 7", "gene_name": "LMO7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and 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Nieborowska-Skorska M, Hoser G, Morrione A, Majewski M, Xue L, Morris SW, Wasik MA, Skorski T", "reference": { "type": "PubMed", "id": "11280786", "url": "https://pubmed.ncbi.nlm.nih.gov/11280786" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": "Ribosome-binding protein 1", "gene_name": "RRBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM73-1", "protein_name": "ALK tyrosine kinase receptor", "gene_name": "ALK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UXT8-1", "protein_name": "ALK and LTK ligand 1", "gene_name": "ALKAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75688-1", "protein_name": "Protein phosphatase 1B", "gene_name": "PPM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14203-1", "protein_name": "Dynactin subunit 1", "gene_name": "DCTN1", "tax_name": 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"protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "FRS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00291-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "HIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29597-1", "protein_name": "Non-receptor tyrosine-protein kinase TYK2", "gene_name": "TYK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33176-1", "protein_name": "Kinesin-1 heavy chain", "gene_name": "KIF5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13501-1", "protein_name": "Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11310834", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 59 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A phosphatidylinositol 3-kinase/Akt pathway promotes translocation of Mdm2 from the cytoplasm to the nucleus.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2001", "authors": "Mayo LD, Donner DB", "reference": { "type": "PubMed", "id": "11504915", "url": "https://pubmed.ncbi.nlm.nih.gov/11504915" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": "Ribosome-binding protein 1", "gene_name": "RRBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00141-1", "protein_name": "Serine/threonine-protein kinase Sgk1", "gene_name": "SGK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UER7-1", "protein_name": "Death domain-associated protein 6", "gene_name": "DAXX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM73-1", "protein_name": "ALK tyrosine kinase receptor", "gene_name": "ALK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q969K3-1", "protein_name": "E3 ubiquitin-protein ligase RNF34", "gene_name": "RNF34", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75688-1", "protein_name": "Protein phosphatase 1B", "gene_name": "PPM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14203-1", "protein_name": "Dynactin subunit 1", "gene_name": "DCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20248-1", "protein_name": "Cyclin-A2", "gene_name": "CCNA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15111-1", "protein_name": "Inhibitor of nuclear factor kappa-B kinase subunit alpha", "gene_name": "CHUK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45984-1", "protein_name": "Mitogen-activated protein kinase 9", "gene_name": "MAPK9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55211-1", "protein_name": "Caspase-9", "gene_name": "CASP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42336-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform", "gene_name": "PIK3CA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WU20-1", "protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "FRS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00291-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "HIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P85299-1", "protein_name": "Proline-rich protein 5", "gene_name": "PRR5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BPZ7-1", "protein_name": "Target of rapamycin complex 2 subunit MAPKAP1", "gene_name": "MAPKAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WZ73-1", "protein_name": "E3 ubiquitin-protein ligase rififylin", "gene_name": "RFFL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93009-1", "protein_name": "Ubiquitin C-terminal hydrolase 7", "gene_name": "USP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62714-1", "protein_name": "Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform", "gene_name": "PPP2CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42771-1", "protein_name": "Cyclin-dependent kinase inhibitor 2A", "gene_name": "CDKN2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06493-1", "protein_name": "Cyclin-dependent kinase 1", "gene_name": "CDK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78396-1", "protein_name": "Cyclin-A1", "gene_name": "CCNA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86W92-1", "protein_name": "Liprin-beta-1", "gene_name": "PPFIBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWI1-1", "protein_name": "LIM domain only protein 7", "gene_name": "LMO7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6R327-1", "protein_name": "Rapamycin-insensitive companion of mTOR", "gene_name": "RICTOR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVC4-1", "protein_name": "Target of rapamycin complex subunit LST8", "gene_name": "MLST8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06748-1", "protein_name": "Nucleophosmin", "gene_name": "NPM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92934-1", "protein_name": "Bcl2-associated agonist of cell death", "gene_name": "BAD", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43815-1", "protein_name": "Striatin", "gene_name": "STRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49841-1", "protein_name": "Glycogen synthase kinase-3 beta", "gene_name": "GSK3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51959-1", "protein_name": "Cyclin-G1", "gene_name": "CCNG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42345-1", "protein_name": "Serine/threonine-protein kinase mTOR", "gene_name": "MTOR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": "MCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29597-1", "protein_name": "Non-receptor tyrosine-protein kinase TYK2", "gene_name": "TYK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33176-1", "protein_name": "Kinesin-1 heavy chain", "gene_name": "KIF5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46527-1", "protein_name": "Cyclin-dependent kinase inhibitor 1B", "gene_name": "CDKN1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13501-1", "protein_name": "Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49840-1", "protein_name": "Glycogen synthase kinase-3 alpha", "gene_name": "GSK3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"gene_name": "IL10RA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00291-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "HIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17676-1", "protein_name": "CCAAT/enhancer-binding protein beta", "gene_name": "CEBPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16548-1", "protein_name": "Bcl-2-related protein A1", "gene_name": "BCL2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29350-1", "protein_name": "Tyrosine-protein phosphatase non-receptor type 6", "gene_name": "PTPN6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08050-1", "protein_name": "Forkhead box protein M1", "gene_name": "FOXM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86W92-1", "protein_name": "Liprin-beta-1", "gene_name": "PPFIBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWI1-1", "protein_name": "LIM domain only protein 7", "gene_name": "LMO7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52333-1", "protein_name": "Tyrosine-protein kinase JAK3", "gene_name": "JAK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62877-1", "protein_name": "E3 ubiquitin-protein ligase RBX1", "gene_name": "RBX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06748-1", "protein_name": "Nucleophosmin", "gene_name": "NPM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43815-1", "protein_name": "Striatin", "gene_name": "STRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKV8-1", "protein_name": "Protein argonaute-2", "gene_name": "AGO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": "MCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9G7-1", "protein_name": "Protein argonaute-3", "gene_name": "AGO3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29597-1", "protein_name": "Non-receptor tyrosine-protein kinase TYK2", "gene_name": "TYK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33176-1", "protein_name": "Kinesin-1 heavy chain", "gene_name": "KIF5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13501-1", "protein_name": "Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCE1-1", "protein_name": "RNA helicase MOV-10", "gene_name": "MOV10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01106-2", "protein_name": "Myc proto-oncogene protein", "gene_name": "MYC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15672-1", "protein_name": "Twist-related protein 1", "gene_name": "TWIST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15306-1", "protein_name": "Interferon regulatory factor 4", "gene_name": "IRF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6W8-1", "protein_name": "Inducible T-cell costimulator", "gene_name": "ICOS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62753-1", "protein_name": "Small ribosomal subunit protein eS6", "gene_name": "RPS6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21246-1", "protein_name": "Pleiotrophin", "gene_name": "PTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14635-1", "protein_name": "G2/mitotic-specific cyclin-B1", "gene_name": "CCNB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43403-1", "protein_name": "Tyrosine-protein kinase ZAP-70", "gene_name": "ZAP70", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27361-1", "protein_name": "Mitogen-activated protein kinase 3", "gene_name": "MAPK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10144-1", "protein_name": "Granzyme B", "gene_name": "GZMB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14222-1", "protein_name": "Perforin-1", "gene_name": "PRF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21741-1", "protein_name": "Midkine", "gene_name": "MDK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WB0-1", "protein_name": "Zinc finger C3HC-type protein 1", "gene_name": "ZC3HC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63208-1", "protein_name": "S-phase kinase-associated protein 1", "gene_name": "SKP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11751994", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 96 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Anaplastic lymphoma kinase (ALK) activates Stat3 and protects hematopoietic cells from cell death.", "journal": "Oncogene", "date": "2002", "authors": "Zamo A, Chiarle R, Piva R, Howes J, Fan Y, Chilosi M, Levy DE, Inghirami G", "reference": { "type": "PubMed", "id": "11850821", "url": "https://pubmed.ncbi.nlm.nih.gov/11850821" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": "Ribosome-binding protein 1", "gene_name": "RRBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM73-1", "protein_name": "ALK tyrosine kinase receptor", "gene_name": "ALK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UXT8-1", "protein_name": "ALK and LTK ligand 1", "gene_name": "ALKAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75688-1", "protein_name": "Protein phosphatase 1B", "gene_name": "PPM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14203-1", "protein_name": "Dynactin subunit 1", "gene_name": "DCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UX46-1", "protein_name": "ALK and LTK ligand 2", "gene_name": "ALKAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45984-1", "protein_name": "Mitogen-activated protein kinase 9", "gene_name": "MAPK9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04198-1", "protein_name": "N-myc proto-oncogene protein", "gene_name": "MYCN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42336-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform", "gene_name": "PIK3CA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WU20-1", "protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "FRS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00291-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "HIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29350-1", "protein_name": "Tyrosine-protein phosphatase non-receptor type 6", "gene_name": "PTPN6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01106-2", "protein_name": "Myc proto-oncogene protein", "gene_name": "MYC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", 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"uniprot_canonical_ac": "P42336-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform", "gene_name": "PIK3CA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WU20-1", "protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "FRS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00291-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "HIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": 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"gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14980-1", "protein_name": "Exportin-1", "gene_name": "XPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43524-1", "protein_name": "Forkhead box protein O3", "gene_name": "FOXO3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06748-1", "protein_name": "Nucleophosmin", "gene_name": "NPM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43815-1", "protein_name": "Striatin", "gene_name": "STRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10415-1", "protein_name": "Apoptosis regulator Bcl-2", "gene_name": "BCL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": "MCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24385-1", "protein_name": "G1/S-specific cyclin-D1", "gene_name": "CCND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29597-1", "protein_name": "Non-receptor 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}, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19419-1", "protein_name": "ETS domain-containing protein Elk-1", "gene_name": "ELK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35070-1", "protein_name": "Probetacellulin", "gene_name": "BTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27361-1", "protein_name": "Mitogen-activated protein kinase 3", "gene_name": "MAPK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99075-1", "protein_name": "Proheparin-binding EGF-like growth factor", "gene_name": "HBEGF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UW88-1", "protein_name": "Epigen", "gene_name": "EPGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14944-1", "protein_name": "Proepiregulin", "gene_name": "EREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01100-1", "protein_name": "Protein c-Fos", "gene_name": "FOS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00533-1", "protein_name": "Epidermal growth factor receptor", "gene_name": "EGFR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11988758", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 82 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of novel fusion partners of ALK, the anaplastic lymphoma kinase, in anaplastic large-cell lymphoma and inflammatory myofibroblastic tumor.", "journal": "Genes, chromosomes & cancer", "date": "2002", "authors": "Cools J, Wlodarska I, Somers R, Mentens N, Pedeutour F, Maes B, De Wolf-Peeters C, Pauwels P, Hagemeijer A, Marynen P", "reference": { "type": "PubMed", 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}, { "uniprot_canonical_ac": "P42336-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform", "gene_name": "PIK3CA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WU20-1", "protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "FRS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00291-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "HIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { 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"P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 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"total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86W92-1", "protein_name": "Liprin-beta-1", "gene_name": "PPFIBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWI1-1", "protein_name": "LIM domain only protein 7", "gene_name": "LMO7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06748-1", "protein_name": "Nucleophosmin", "gene_name": "NPM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43815-1", "protein_name": "Striatin", "gene_name": "STRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": "MCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29597-1", "protein_name": "Non-receptor tyrosine-protein kinase TYK2", "gene_name": "TYK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33176-1", "protein_name": "Kinesin-1 heavy chain", "gene_name": "KIF5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13501-1", "protein_name": "Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase 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"gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21741-1", "protein_name": "Midkine", "gene_name": "MDK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12424201", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 67 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", 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Biotechnol.", "date": "2003", "authors": "Gevaert K, Goethals M, Martens L, Van Damme J, Staes A, Thomas GR, Vandekerckhove J", "reference": { "type": "PubMed", "id": "12665801", "url": "https://pubmed.ncbi.nlm.nih.gov/12665801" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17252-1", "protein_name": "Protein kinase C alpha type", "gene_name": "PRKCA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVA2-1", "protein_name": "Septin-11", "gene_name": "SEPTIN11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54136-1", "protein_name": "Arginine--tRNA ligase, cytoplasmic", "gene_name": "RARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09211-1", "protein_name": "Glutathione S-transferase P", "gene_name": "GSTP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60493-1", "protein_name": "Sorting nexin-3", 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"Q9Y5H9-1", "protein_name": "Protocadherin alpha-2", "gene_name": "PCDHA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75915-1", "protein_name": "PRA1 family protein 3", "gene_name": "ARL6IP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35998-1", "protein_name": "26S proteasome regulatory subunit 7", "gene_name": "PSMC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10619-1", "protein_name": "Lysosomal protective protein", "gene_name": "CTSA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04844-1", "protein_name": "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2", "gene_name": "RPN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43264-1", "protein_name": "Centromere/kinetochore protein zw10 homolog", "gene_name": "ZW10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00161-1", "protein_name": "Synaptosomal-associated protein 23", "gene_name": "SNAP23", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q05209-1", "protein_name": "Tyrosine-protein phosphatase non-receptor type 12", "gene_name": "PTPN12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93084-2", "protein_name": "Sarcoplasmic/endoplasmic reticulum calcium ATPase 3", "gene_name": "ATP2A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55084-1", "protein_name": "Trifunctional enzyme subunit beta, mitochondrial", "gene_name": "HADHB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04406-1", "protein_name": "Glyceraldehyde-3-phosphate dehydrogenase", "gene_name": "GAPDH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04275-1", "protein_name": "von Willebrand factor", "gene_name": "VWF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15836-1", "protein_name": "Vesicle-associated membrane protein 3", "gene_name": "VAMP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14174-1", "protein_name": "Macrophage migration inhibitory factor", "gene_name": "MIF", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00587-1", "protein_name": "Cdc42 effector protein 1", "gene_name": "CDC42EP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47756-2", "protein_name": "F-actin-capping protein subunit beta", "gene_name": "CAPZB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04040-1", "protein_name": "Catalase", "gene_name": "CAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02766-1", "protein_name": "Transthyretin", "gene_name": "TTR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47755-1", "protein_name": "F-actin-capping protein subunit alpha-2", "gene_name": "CAPZA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61803-1", "protein_name": "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1", "gene_name": "DAD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00796-1", "protein_name": "Sorbitol dehydrogenase", "gene_name": "SORD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42830-1", "protein_name": "C-X-C motif chemokine 5", "gene_name": "CXCL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2U2-1", "protein_name": "Inorganic pyrophosphatase 2, mitochondrial", "gene_name": "PPA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05771-1", "protein_name": "Protein kinase C beta type", "gene_name": "PRKCB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13576-1", "protein_name": "Ras GTPase-activating-like protein IQGAP2", "gene_name": "IQGAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15404-1", "protein_name": "Ras suppressor protein 1", "gene_name": "RSU1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Z0-1", "protein_name": "Protein SGT1 homolog", "gene_name": "SUGT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14607-1", "protein_name": "Histone demethylase UTY", "gene_name": "UTY", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48059-1", "protein_name": "LIM and senescent cell antigen-like-containing domain protein 1", "gene_name": "LIMS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99456-1", "protein_name": "Keratin, type I cytoskeletal 12", "gene_name": "KRT12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11277-1", "protein_name": "Spectrin beta chain, erythrocytic", "gene_name": "SPTB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52788-1", "protein_name": "Spermine synthase", "gene_name": "SMS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW7-1", "protein_name": "Xaa-Pro aminopeptidase 1", "gene_name": "XPNPEP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62937-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A", "gene_name": "PPIA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17987-1", "protein_name": "T-complex protein 1 subunit alpha", "gene_name": "TCP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95866-1", "protein_name": "Megakaryocyte and platelet inhibitory receptor G6b", "gene_name": "MPIG6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17858-1", "protein_name": "ATP-dependent 6-phosphofructokinase, liver type", "gene_name": "PFKL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41226-1", "protein_name": "Ubiquitin-like modifier-activating enzyme 7", "gene_name": "UBA7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14139-1", "protein_name": "Ubiquitin conjugation factor E4 A", "gene_name": "UBE4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14737-1", "protein_name": "Programmed cell death protein 5", "gene_name": "PDCD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55145-1", "protein_name": "Mesencephalic astrocyte-derived neurotrophic factor", "gene_name": "MANF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95292-1", "protein_name": "Vesicle-associated membrane protein-associated protein B/C", "gene_name": "VAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01469-1", "protein_name": "Fatty acid-binding protein 5", "gene_name": "FABP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30046-1", "protein_name": "D-dopachrome decarboxylase", "gene_name": "DDT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07108-1", "protein_name": "Acyl-CoA-binding protein", "gene_name": "DBI", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14745-1", "protein_name": "Na(+)/H(+) exchange regulatory cofactor NHE-RF1", "gene_name": "NHERF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14744-1", "protein_name": "Protein arginine N-methyltransferase 5", "gene_name": "PRMT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12814-1", "protein_name": "Alpha-actinin-1", "gene_name": "ACTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23528-1", "protein_name": "Cofilin-1", "gene_name": "CFL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13884-1", "protein_name": "Beta-1-syntrophin", "gene_name": "SNTB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62942-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP1A", "gene_name": "FKBP1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P69905-1", "protein_name": "Hemoglobin subunit alpha", "gene_name": "HBA1; HBA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55072-1", "protein_name": "Transitional endoplasmic reticulum ATPase", "gene_name": "VCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y285-1", "protein_name": "Phenylalanine--tRNA ligase alpha subunit", "gene_name": "FARSA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63261-1", "protein_name": "Actin, cytoplasmic 2", "gene_name": "ACTG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P37802-1", "protein_name": "Transgelin-2", "gene_name": "TAGLN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13541-1", "protein_name": "Eukaryotic translation initiation factor 4E-binding protein 1", "gene_name": "EIF4EBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50402-1", "protein_name": "Emerin", "gene_name": "EMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60981-1", "protein_name": "Destrin", "gene_name": "DSTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42768-1", "protein_name": "Actin nucleation-promoting factor WAS", "gene_name": "WAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63218-1", "protein_name": "Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5", "gene_name": "GNG5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12429-1", "protein_name": "Annexin A3", "gene_name": "ANXA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62140-1", "protein_name": "Serine/threonine-protein phosphatase PP1-beta catalytic subunit", "gene_name": "PPP1CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04075-1", "protein_name": "Fructose-bisphosphate aldolase A", "gene_name": "ALDOA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02768-1", "protein_name": "Albumin", "gene_name": "ALB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06396-1", "protein_name": "Gelsolin", "gene_name": "GSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4M9-1", "protein_name": "EH domain-containing protein 1", "gene_name": "EHD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JB2-1", "protein_name": "Conserved oligomeric Golgi complex subunit 3", "gene_name": "COG3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99439-1", "protein_name": "Calponin-2", "gene_name": "CNN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14019-1", "protein_name": "Coactosin-like protein", "gene_name": "COTL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02775-1", "protein_name": "Platelet basic protein", "gene_name": "PPBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02675-1", "protein_name": "Fibrinogen beta chain", "gene_name": "FGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZN8-1", "protein_name": "Adipose-secreted signaling protein", "gene_name": "ADISSP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58107-1", "protein_name": "Epiplakin", "gene_name": "EPPK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05106-1", "protein_name": "Integrin beta-3", "gene_name": "ITGB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y613-1", "protein_name": "FH1/FH2 domain-containing protein 1", "gene_name": "FHOD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13642-2", "protein_name": "Four and a half LIM domains protein 1", "gene_name": "FHL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14847-1", "protein_name": "LIM and SH3 domain protein 1", "gene_name": "LASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11413-1", "protein_name": "Glucose-6-phosphate 1-dehydrogenase", "gene_name": "G6PD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3P7-1", "protein_name": "Golgi resident protein GCP60", "gene_name": "ACBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFU3-1", "protein_name": "Thiosulfate:glutathione sulfurtransferase", "gene_name": "TSTD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13561-1", "protein_name": "Dynactin subunit 2", "gene_name": "DCTN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55273-1", "protein_name": "Cyclin-dependent kinase 4 inhibitor D", "gene_name": "CDKN2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10809-1", "protein_name": "60 kDa heat shock protein, mitochondrial", "gene_name": "HSPD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78371-1", "protein_name": "T-complex protein 1 subunit beta", "gene_name": "CCT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01518-1", "protein_name": "Adenylyl cyclase-associated protein 1", "gene_name": "CAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43852-1", "protein_name": "Calumenin", "gene_name": "CALU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17655-1", "protein_name": "Calpain-2 catalytic subunit", "gene_name": "CAPN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11586-1", "protein_name": "C-1-tetrahydrofolate synthase, cytoplasmic", "gene_name": "MTHFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15049-1", "protein_name": "Membrane protein MLC1", "gene_name": "MLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14141-1", "protein_name": "Septin-6", "gene_name": "SEPTIN6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30041-1", "protein_name": "Peroxiredoxin-6", "gene_name": "PRDX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41091-1", "protein_name": "Eukaryotic translation initiation factor 2 subunit 3", "gene_name": "EIF2S3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86Y39-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11", "gene_name": "NDUFA11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15036-1", "protein_name": "Sorting nexin-17", "gene_name": "SNX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16401-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 5", "gene_name": "PSMD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16378-1", "protein_name": "Proline-rich protein 4", "gene_name": "PRR4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y570-1", "protein_name": "Protein phosphatase methylesterase 1", "gene_name": "PPME1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00232-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 12", "gene_name": "PSMD12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11216-1", "protein_name": "Glycogen phosphorylase, brain form", "gene_name": "PYGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG35-1", "protein_name": "Thymosin beta-15B", "gene_name": "TMSB15B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61165-1", "protein_name": "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit TMEM258", "gene_name": "TMEM258", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15400-1", "protein_name": "Syntaxin-7", "gene_name": "STX7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG34-1", "protein_name": "Thymosin beta-15A", "gene_name": "TMSB15A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWA1-1", "protein_name": "Transmembrane protein 40", "gene_name": "TMEM40", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15819-1", "protein_name": "Ubiquitin-conjugating enzyme E2 variant 2", "gene_name": "UBE2V2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43396-1", "protein_name": "Thioredoxin-like protein 1", "gene_name": "TXNL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62253-1", "protein_name": "Ubiquitin-conjugating enzyme E2 G1", "gene_name": "UBE2G1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09382-1", "protein_name": "Galectin-1", "gene_name": "LGALS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14012-1", "protein_name": "Calcium/calmodulin-dependent protein kinase type 1", "gene_name": "CAMK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3K6-1", "protein_name": "BolA-like protein 2", "gene_name": "BOLA2-SMG1P6; BOLA2B; BOLA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y230-1", "protein_name": "RuvB-like 2", "gene_name": "RUVBL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P80217-1", "protein_name": "Interferon-induced 35 kDa protein", "gene_name": "IFI35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4W1-1", "protein_name": "L-xylulose reductase", "gene_name": "DCXR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVP1-1", "protein_name": "ATP-dependent RNA helicase DDX18", "gene_name": "DDX18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62495-1", "protein_name": "Eukaryotic peptide chain release factor subunit 1", "gene_name": "ETF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14314-1", "protein_name": "Glucosidase 2 subunit beta", "gene_name": "PRKCSH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14770-1", "protein_name": "Platelet glycoprotein IX", "gene_name": "GP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NV70-1", "protein_name": "Exocyst complex component 1", "gene_name": "EXOC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26440-1", "protein_name": "Isovaleryl-CoA dehydrogenase, mitochondrial", "gene_name": "IVD", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95373-1", "protein_name": "Importin-7", "gene_name": "IPO7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13716-1", "protein_name": "Delta-aminolevulinic acid dehydratase", "gene_name": "ALAD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23368-1", "protein_name": "NAD-dependent malic enzyme, mitochondrial", "gene_name": "ME2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AX2-1", "protein_name": "Ras-related protein Rab-37", "gene_name": "RAB37", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29401-1", "protein_name": "Transketolase", "gene_name": "TKT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40227-1", "protein_name": "T-complex protein 1 subunit zeta", "gene_name": "CCT6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13045-1", "protein_name": "Protein flightless-1 homolog", "gene_name": "FLII", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14625-1", "protein_name": "Endoplasmin", "gene_name": "HSP90B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16762-1", "protein_name": "Thiosulfate sulfurtransferase", "gene_name": "TST", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75083-1", "protein_name": "WD repeat-containing protein 1", "gene_name": "WDR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30101-1", "protein_name": "Protein disulfide-isomerase A3", "gene_name": "PDIA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05067-1", "protein_name": "Amyloid-beta precursor protein", "gene_name": "APP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZP0-1", "protein_name": "Abl interactor 1", "gene_name": "ABI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02647-1", "protein_name": "Apolipoprotein A-I", "gene_name": "APOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63104-1", "protein_name": "14-3-3 protein zeta/delta", "gene_name": "YWHAZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04917-1", "protein_name": "14-3-3 protein eta", "gene_name": "YWHAH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31946-1", "protein_name": "14-3-3 protein beta/alpha", "gene_name": "YWHAB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27348-1", "protein_name": "14-3-3 protein theta", "gene_name": "YWHAQ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61981-1", "protein_name": "14-3-3 protein gamma", "gene_name": "YWHAG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48047-1", "protein_name": "ATP synthase peripheral stalk subunit OSCP, mitochondrial", "gene_name": "ATP5PO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50552-1", "protein_name": "Vasodilator-stimulated phosphoprotein", "gene_name": "VASP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P1F3-1", "protein_name": "Costars family protein ABRACL", "gene_name": "ABRACL", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95870-1", "protein_name": "Phosphatidylserine lipase ABHD16A", "gene_name": "ABHD16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12665801", "abstract": "", "glycosylation": [], 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": "MCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29597-1", "protein_name": "Non-receptor tyrosine-protein kinase TYK2", "gene_name": "TYK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33176-1", "protein_name": "Kinesin-1 heavy chain", "gene_name": "KIF5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13501-1", "protein_name": "Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12750159", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 59 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "1H, 15N and 13C resonance assignments of the highly conserved 19 kDa C-terminal domain from human elongation factor 1Bgamma.", "journal": "J. Biomol. NMR", "date": "2003", "authors": "Vanwetswinkel Sophie, Kriek Jan, Andersen Gregers R, Dijk Jan, Siegal Gregg", "reference": { "type": "PubMed", "id": "12766415", "url": "https://pubmed.ncbi.nlm.nih.gov/12766415" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12766415", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": 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[] } ] }, { "title": "ALK+, CD30-, CD20- large B-cell lymphoma containing anaplastic lymphoma kinase (ALK) fused to clathrin heavy chain gene (CLTC).", "journal": "Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc", "date": "2003", "authors": "Chikatsu N, Kojima H, Suzukawa K, Shinagawa A, Nagasawa T, Ozawa H, Yamashita Y, Mori N", "reference": { "type": "PubMed", "id": "12920229", "url": "https://pubmed.ncbi.nlm.nih.gov/12920229" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": "Ribosome-binding protein 1", "gene_name": "RRBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM73-1", "protein_name": "ALK tyrosine kinase receptor", "gene_name": "ALK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75688-1", "protein_name": "Protein phosphatase 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"authors": "Sanders J, Maassen JA, Moller W", "reference": { "type": "PubMed", "id": "1461723", "url": "https://pubmed.ncbi.nlm.nih.gov/1461723" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1461723", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", 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{ "uniprot_canonical_ac": "P08865-1", "protein_name": "Small ribosomal subunit protein uS2", "gene_name": "RPSA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62847-1", "protein_name": "Small ribosomal subunit protein eS24", "gene_name": "RPS24", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62241-1", "protein_name": "Small ribosomal subunit protein eS8", "gene_name": "RPS8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00325-1", "protein_name": "Solute carrier family 25 member 3", "gene_name": "SLC25A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13796-1", "protein_name": "Plastin-2", "gene_name": "LCP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39019-1", "protein_name": "Small ribosomal subunit protein eS19", "gene_name": "RPS19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35998-1", "protein_name": "26S proteasome regulatory subunit 7", "gene_name": "PSMC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VV8-1", "protein_name": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P60228-1", "protein_name": "Eukaryotic translation initiation factor 3 subunit E", "gene_name": "EIF3E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00839-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein U", "gene_name": "HNRNPU", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15182-1", "protein_name": "Centrin-3", "gene_name": "CETN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95613-1", "protein_name": "Pericentrin", "gene_name": "PCNT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JTW2-1", "protein_name": "Centrosomal protein of 78 kDa", "gene_name": "CEP78", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYV8-1", "protein_name": "Centrosomal protein of 41 kDa", "gene_name": "CEP41", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96N67-1", "protein_name": "Dedicator of cytokinesis protein 7", "gene_name": "DOCK7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NA72-1", "protein_name": "Centrosomal protein POC5", "gene_name": "POC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96SN8-1", "protein_name": "CDK5 regulatory subunit-associated protein 2", "gene_name": "CDK5RAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TC05-1", "protein_name": "Stabilizer of axonemal microtubules 6", "gene_name": "SAXO6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ19-1", "protein_name": "Centriole, cilia and spindle-associated protein", "gene_name": "CCSAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76N32-1", "protein_name": "Centrosomal protein of 68 kDa", "gene_name": "CEP68", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38646-1", "protein_name": "Stress-70 protein, mitochondrial", "gene_name": "HSPA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24534-1", "protein_name": "Elongation factor 1-beta", "gene_name": "EEF1B2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04406-1", "protein_name": "Glyceraldehyde-3-phosphate dehydrogenase", "gene_name": "GAPDH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60660-1", "protein_name": "Myosin light polypeptide 6", "gene_name": "MYL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13200-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 2", "gene_name": "PSMD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N3C0-1", "protein_name": "Activating signal cointegrator 1 complex subunit 3", "gene_name": "ASCC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54886-1", "protein_name": "Delta-1-pyrroline-5-carboxylate synthase", "gene_name": "ALDH18A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27694-1", "protein_name": "Replication protein A 70 kDa DNA-binding subunit", "gene_name": "RPA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06493-1", "protein_name": "Cyclin-dependent kinase 1", "gene_name": "CDK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42677-1", "protein_name": "Small ribosomal subunit protein eS27", "gene_name": "RPS27", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DP23-1", "protein_name": "Calmodulin-1", "gene_name": "CALM1; CALM2; CALM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13263-1", "protein_name": "Transcription intermediary factor 1-beta", "gene_name": "TRIM28", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DP24-1", "protein_name": "Calmodulin-2", "gene_name": "CALM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DP25-1", "protein_name": "Calmodulin-3", "gene_name": "CALM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT92-1", "protein_name": "Trichoplein keratin filament-binding protein", "gene_name": "TCHP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29350-1", "protein_name": "Tyrosine-protein phosphatase non-receptor type 6", "gene_name": "PTPN6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55209-1", "protein_name": "Nucleosome assembly protein 1-like 1", "gene_name": "NAP1L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5SZL2-1", "protein_name": "Centrosomal protein of 85 kDa-like", "gene_name": "CEP85L", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43303-1", "protein_name": "Centriolar coiled-coil protein of 110 kDa", "gene_name": "CCP110", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VT06-1", "protein_name": "Centrosome-associated protein 350", "gene_name": "CEP350", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BR77-1", "protein_name": "Coiled-coil domain-containing protein 77", "gene_name": "CCDC77", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94986-4", "protein_name": "Centrosomal protein of 152 kDa", "gene_name": "CEP152", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41208-1", "protein_name": "Centrin-2", "gene_name": "CETN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q66GS9-1", "protein_name": "Centrosomal protein of 135 kDa", "gene_name": "CEP135", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XR8-1", "protein_name": "Centrosomal protein of 57 kDa", "gene_name": "CEP57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96ST8-1", "protein_name": "Centrosomal protein of 89 kDa", "gene_name": "CEP89", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN4-1", "protein_name": "Centrosomal protein of 131 kDa", "gene_name": "CEP131", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7A1-1", "protein_name": "Centriolin", "gene_name": "CNTRL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15287-1", "protein_name": "RNA-binding protein with serine-rich domain 1", "gene_name": "RNPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62316-1", "protein_name": "Small nuclear ribonucleoprotein Sm D2", "gene_name": "SNRPD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17844-1", "protein_name": "Probable ATP-dependent RNA helicase DDX5", "gene_name": "DDX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NC51-1", "protein_name": "SERPINE1 mRNA-binding protein 1", "gene_name": "SERBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13409-1", "protein_name": "Cytoplasmic dynein 1 intermediate chain 2", "gene_name": "DYNC1I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00629-1", "protein_name": "Importin subunit alpha-3", "gene_name": "KPNA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N0Z3-1", "protein_name": "Spindle and centriole-associated protein 1", "gene_name": "SPICE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43143-1", "protein_name": "ATP-dependent RNA helicase DHX15", "gene_name": "DHX15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6G9-1", "protein_name": "Cytoplasmic dynein 1 light intermediate chain 1", "gene_name": "DYNC1LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62263-1", "protein_name": "Small ribosomal subunit protein uS11", "gene_name": "RPS14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13645-1", "protein_name": "Keratin, type I cytoskeletal 10", "gene_name": "KRT10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12268-1", "protein_name": "Inosine-5'-monophosphate dehydrogenase 2", "gene_name": "IMPDH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18124-1", "protein_name": "Large ribosomal subunit protein uL30", "gene_name": "RPL7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02533-1", "protein_name": "Keratin, type I cytoskeletal 14", "gene_name": "KRT14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2W1-1", "protein_name": "Thyroid hormone receptor-associated protein 3", "gene_name": "THRAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32119-1", "protein_name": "Peroxiredoxin-2", "gene_name": "PRDX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13395-1", "protein_name": "tRNA (guanosine(18)-2'-O)-methyltransferase TARBP1", "gene_name": "TARBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62937-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A", "gene_name": "PPIA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ6-1", "protein_name": "HAUS augmin-like complex subunit 3", "gene_name": "HAUS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RT8-1", "protein_name": "Gamma-tubulin complex component 5", "gene_name": "TUBGCP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17987-1", "protein_name": "T-complex protein 1 subunit alpha", "gene_name": "TCP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08579-1", "protein_name": "U2 small nuclear ribonucleoprotein B''", "gene_name": "SNRPB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BSJ2-1", "protein_name": "Gamma-tubulin complex component 2", "gene_name": "TUBGCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15880-1", "protein_name": "Small ribosomal subunit protein uS5", "gene_name": "RPS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62249-1", "protein_name": "Small ribosomal subunit protein uS9", "gene_name": "RPS16", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50914-1", "protein_name": "Large ribosomal subunit protein eL14", "gene_name": "RPL14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62906-1", "protein_name": "Large ribosomal subunit protein uL1", "gene_name": "RPL10A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15366-1", "protein_name": "Poly(rC)-binding protein 2", "gene_name": "PCBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y262-1", "protein_name": "Eukaryotic translation initiation factor 3 subunit L", "gene_name": "EIF3L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P2Q9-1", "protein_name": "Pre-mRNA-processing-splicing factor 8", "gene_name": "PRPF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08238-1", "protein_name": "Heat shock protein HSP 90-beta", "gene_name": "HSP90AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07910-1", "protein_name": "Heterogeneous nuclear ribonucleoproteins C1/C2", "gene_name": "HNRNPC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08670-1", "protein_name": "Vimentin", "gene_name": "VIM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IW35-1", "protein_name": "Centrosomal protein of 97 kDa", "gene_name": "CEP97", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05141-1", "protein_name": "ADP/ATP translocase 2", "gene_name": "SLC25A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12236-1", "protein_name": "ADP/ATP translocase 3", "gene_name": "SLC25A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06576-1", "protein_name": "ATP synthase F(1) complex subunit beta, mitochondrial", "gene_name": "ATP5F1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06748-1", "protein_name": "Nucleophosmin", "gene_name": "NPM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23396-1", "protein_name": "Small ribosomal subunit protein uS3", "gene_name": "RPS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23528-1", "protein_name": "Cofilin-1", "gene_name": "CFL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11142-1", "protein_name": "Heat shock cognate 71 kDa protein", "gene_name": "HSPA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25705-1", "protein_name": "ATP synthase F(1) complex subunit alpha, mitochondrial", "gene_name": "ATP5F1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07737-1", "protein_name": "Profilin-1", "gene_name": "PFN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19338-1", "protein_name": "Nucleolin", "gene_name": "NCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC77-1", "protein_name": "Centrosomal P4.1-associated protein", "gene_name": "CPAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63261-1", "protein_name": "Actin, cytoplasmic 2", "gene_name": "ACTG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NHQ1-1", "protein_name": "Centrosomal protein of 70 kDa", "gene_name": "CEP70", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61163-1", "protein_name": "Alpha-centractin", "gene_name": "ACTR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52597-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein F", "gene_name": "HNRNPF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07355-1", "protein_name": "Annexin A2", "gene_name": "ANXA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08211-1", "protein_name": "ATP-dependent RNA helicase A", "gene_name": "DHX9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52272-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein M", "gene_name": "HNRNPM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99996-2", "protein_name": "A-kinase anchor protein 9", "gene_name": "AKAP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49674-1", "protein_name": "Casein kinase I isoform epsilon", "gene_name": "CSNK1E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15691-1", "protein_name": "Microtubule-associated protein RP/EB family member 1", "gene_name": "MAPRE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47897-1", "protein_name": "Glutamine--tRNA ligase", "gene_name": "QARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04075-1", "protein_name": "Fructose-bisphosphate aldolase A", "gene_name": "ALDOA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCU4-1", "protein_name": "Centrosome-associated protein ALMS1", "gene_name": "ALMS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01081-1", "protein_name": "Splicing factor U2AF 35 kDa subunit", "gene_name": "U2AF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MT8-1", "protein_name": "Centrosomal protein of 63 kDa", "gene_name": "CEP63", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07900-1", "protein_name": "Heat shock protein HSP 90-alpha", "gene_name": "HSP90AA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14868-1", "protein_name": "Aspartate--tRNA ligase, cytoplasmic", "gene_name": "DARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26368-1", "protein_name": "Splicing factor U2AF 65 kDa subunit", "gene_name": "U2AF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06830-1", "protein_name": "Peroxiredoxin-1", "gene_name": "PRDX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3I0-1", "protein_name": "RNA-splicing ligase RTCB", "gene_name": "RTCB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P2E9-1", "protein_name": "Enhancer of mRNA-decapping protein 4", "gene_name": "EDC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00571-1", "protein_name": "ATP-dependent RNA helicase DDX3X", "gene_name": "DDX3X", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62306-1", "protein_name": "Small nuclear ribonucleoprotein F", "gene_name": "SNRPF", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TZA2-1", "protein_name": "Rootletin", "gene_name": "CROCC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49327-1", "protein_name": "Fatty acid synthase", "gene_name": "FASN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75369-1", "protein_name": "Filamin-B", "gene_name": "FLNB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62318-1", "protein_name": "Small nuclear ribonucleoprotein Sm D3", "gene_name": "SNRPD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00558-1", "protein_name": "Phosphoglycerate kinase 1", "gene_name": "PGK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22234-1", "protein_name": "Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase", "gene_name": "PAICS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62841-1", "protein_name": "Small ribosomal subunit protein uS19", "gene_name": "RPS15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CW5-1", "protein_name": "Gamma-tubulin complex component 3", "gene_name": "TUBGCP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RT7-1", "protein_name": "Gamma-tubulin complex component 6", "gene_name": "TUBGCP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "C0HME6-1", "protein_name": "RPL36 alternative reading frame protein", "gene_name": "RPL36", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYX8-1", "protein_name": "Centrosomal protein CEP57L1", "gene_name": "CEP57L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13561-1", "protein_name": "Dynactin subunit 2", "gene_name": "DCTN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32969-1", "protein_name": "Large ribosomal subunit protein uL6", "gene_name": "RPL9P7; RPL9P8; RPL9P9; RPL9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10809-1", "protein_name": "60 kDa heat shock protein, mitochondrial", "gene_name": "HSPD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92608-1", "protein_name": "Dedicator of cytokinesis protein 2", "gene_name": "DOCK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78371-1", "protein_name": "T-complex protein 1 subunit beta", "gene_name": "CCT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11586-1", "protein_name": "C-1-tetrahydrofolate synthase, cytoplasmic", "gene_name": "MTHFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23258-1", "protein_name": "Tubulin gamma-1 chain", "gene_name": "TUBG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30050-1", "protein_name": "Large ribosomal subunit protein uL11", "gene_name": "RPL12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTE1-1", "protein_name": "Dynactin subunit 5", "gene_name": "DCTN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46777-1", "protein_name": "Large ribosomal subunit protein uL18", "gene_name": "RPL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35580-1", "protein_name": "Myosin-10", "gene_name": "MYH10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVX0-1", "protein_name": "HAUS augmin-like complex subunit 2", "gene_name": "HAUS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13310-1", "protein_name": "Polyadenylate-binding protein 4", "gene_name": "PABPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55060-1", "protein_name": "Exportin-2", "gene_name": "CSE1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96C36-1", "protein_name": "Pyrroline-5-carboxylate reductase 2", "gene_name": "PYCR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01813-1", "protein_name": "ATP-dependent 6-phosphofructokinase, platelet type", "gene_name": "PFKP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43487-1", "protein_name": "Ran-specific GTPase-activating protein", "gene_name": "RANBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22102-1", "protein_name": "Trifunctional purine biosynthetic protein adenosine-3", "gene_name": "GART", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00232-1", "protein_name": "26S proteasome non-ATPase regulatory subunit 12", "gene_name": "PSMD12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27635-1", "protein_name": "Large ribosomal subunit protein uL16", "gene_name": "RPL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51991-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein A3", "gene_name": "HNRNPA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14103-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein D0", "gene_name": "HNRNPD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6D7-1", "protein_name": "HAUS augmin-like complex subunit 4", "gene_name": "HAUS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07814-1", "protein_name": "Bifunctional glutamate/proline--tRNA ligase", "gene_name": "EPRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62913-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "RPL11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P36578-1", "protein_name": "Large ribosomal subunit protein uL4", "gene_name": "RPL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48643-1", "protein_name": "T-complex protein 1 subunit epsilon", "gene_name": "CCT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IX5-1", "protein_name": "ATP synthase F(0) complex subunit k, mitochondrial", "gene_name": "ATP5MK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75506-1", "protein_name": "Heat shock factor-binding protein 1", "gene_name": "HSBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P209-1", "protein_name": "Centrosomal protein of 72 kDa", "gene_name": "CEP72", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF42-1", "protein_name": "Ubiquitin-associated and SH3 domain-containing protein B", "gene_name": "UBASH3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TD31-1", "protein_name": "Coiled-coil alpha-helical rod 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "NPM-ALK fusion kinase of anaplastic large-cell lymphoma regulates survival and proliferative signaling through modulation of FOXO3a.", "journal": "Blood", "date": "2004", "authors": "Gu TL, Tothova Z, Scheijen B, Griffin JD, Gilliland DG, Sternberg DW", "reference": { "type": "PubMed", "id": "14962911", "url": "https://pubmed.ncbi.nlm.nih.gov/14962911" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": 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"protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01106-2", "protein_name": "Myc proto-oncogene protein", "gene_name": "MYC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21246-1", "protein_name": "Pleiotrophin", "gene_name": "PTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21741-1", "protein_name": "Midkine", "gene_name": "MDK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15374880", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 67 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of natural peptide ligands from HLA-DP2: new insights into HLA-DP peptide-binding motifs.", "journal": "Immunogenetics", "date": "2005-01", "authors": "D\u00edaz Gema, Ca\u00f1as Benito, Vazquez Jes\u00fas, Nombela C\u00e9sar, Arroyo Javier", "reference": { "type": "PubMed", "id": "15565337", "url": "https://pubmed.ncbi.nlm.nih.gov/15565337" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92823-1", "protein_name": "Neuronal cell adhesion molecule", "gene_name": "NRCAM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42892-1", "protein_name": "Endothelin-converting enzyme 1", "gene_name": "ECE1", "tax_name": "Human" }, { 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"PDIA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06733-1", "protein_name": "Alpha-enolase", "gene_name": "ENO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15565337", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 20 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "NPM/ALK downregulates p27Kip1 in a PI-3K-dependent manner.", "journal": "Experimental hematology", "date": "2004", "authors": "Slupianek A, Skorski T", "reference": { "type": "PubMed", "id": "15588951", "url": "https://pubmed.ncbi.nlm.nih.gov/15588951" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": "Ribosome-binding protein 1", "gene_name": "RRBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM73-1", "protein_name": "ALK tyrosine kinase receptor", "gene_name": "ALK", 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86W92-1", "protein_name": "Liprin-beta-1", "gene_name": "PPFIBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWI1-1", "protein_name": "LIM domain only protein 7", "gene_name": "LMO7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52333-1", "protein_name": "Tyrosine-protein kinase JAK3", "gene_name": "JAK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06748-1", "protein_name": "Nucleophosmin", "gene_name": "NPM1", "tax_name": "Human" 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"uniprot_canonical_ac": "P33176-1", "protein_name": "Kinesin-1 heavy chain", "gene_name": "KIF5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13501-1", "protein_name": "Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01106-2", "protein_name": "Myc proto-oncogene protein", "gene_name": "MYC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21246-1", "protein_name": "Pleiotrophin", "gene_name": "PTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21741-1", "protein_name": "Midkine", "gene_name": "MDK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15588951", "abstract": "", "glycosylation": [], 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histocompatibility complex class I-associated tumor peptides by Nano-LC MALDI MS/MS.", "journal": "Molecular & cellular proteomics : MCP", "date": "2005-12", "authors": "Hofmann Sandra, Gl\u00fcckmann Matthias, Kausche Sandra, Schmidt Andrea, Corvey Carsten, Lichtenfels Rudolf, Huber Christoph, Albrecht Christian, Karas Michael, Herr Wolfgang", "reference": { "type": "PubMed", "id": "16112985", "url": "https://pubmed.ncbi.nlm.nih.gov/16112985" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62701-1", "protein_name": "Small ribosomal subunit protein eS4, X isoform", "gene_name": "RPS4X", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14566-1", "protein_name": "DNA replication licensing factor MCM6", "gene_name": "MCM6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52895-1", "protein_name": "Aldo-keto reductase family 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"uniprot_canonical_ac": "O15417-1", "protein_name": "Trinucleotide repeat-containing gene 18 protein", "gene_name": "TNRC18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61978-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein K", "gene_name": "HNRNPK", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16112985", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 20 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, 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{ "uniprot_canonical_ac": "P42336-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform", "gene_name": "PIK3CA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WU20-1", "protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "FRS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00291-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "HIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"uniprot_canonical_ac": "P06748-1", "protein_name": "Nucleophosmin", "gene_name": "NPM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43815-1", "protein_name": "Striatin", "gene_name": "STRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": "MCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": 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}, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21741-1", "protein_name": "Midkine", "gene_name": "MDK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16153455", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 67 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Fusion of the SEC31L1 and ALK genes in an inflammatory myofibroblastic tumor.", "journal": "International journal of cancer", "date": "2006", "authors": "Panagopoulos I, Nilsson T, Domanski HA, Isaksson M, Lindblom P, Mertens F, Mandahl N", "reference": { "type": "PubMed", "id": "16161041", "url": "https://pubmed.ncbi.nlm.nih.gov/16161041" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": "Ribosome-binding protein 1", "gene_name": "RRBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM73-1", "protein_name": "ALK tyrosine kinase receptor", "gene_name": "ALK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75688-1", "protein_name": "Protein phosphatase 1B", "gene_name": "PPM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14203-1", "protein_name": "Dynactin subunit 1", "gene_name": "DCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45984-1", "protein_name": "Mitogen-activated protein kinase 9", "gene_name": "MAPK9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42336-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform", "gene_name": "PIK3CA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WU20-1", "protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "FRS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00291-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "HIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"protein_name": "Striatin", "gene_name": "STRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": "MCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29597-1", "protein_name": "Non-receptor tyrosine-protein kinase TYK2", "gene_name": "TYK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33176-1", "protein_name": "Kinesin-1 heavy chain", "gene_name": "KIF5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13501-1", "protein_name": "Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16161041", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 59 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21741-1", "protein_name": "Midkine", "gene_name": "MDK", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16170336", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 67 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 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Microbiol.", "date": "2006", "authors": "Leong WF, Chow VT", "reference": { "type": "PubMed", "id": "16548883", "url": "https://pubmed.ncbi.nlm.nih.gov/16548883" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61966-1", "protein_name": "AP-1 complex subunit sigma-1A", "gene_name": "AP1S1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04114-1", "protein_name": "Apolipoprotein B-100", "gene_name": "APOB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10909-1", "protein_name": "Clusterin", "gene_name": "CLU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16949-1", "protein_name": "Stathmin", "gene_name": "STMN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35269-1", "protein_name": "General transcription factor IIF subunit 1", "gene_name": "GTF2F1", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Loss of SHP1 enhances JAK3/STAT3 signaling and decreases proteosome degradation of JAK3 and NPM-ALK in ALK+ anaplastic large-cell lymphoma.", "journal": "Blood", "date": "2006", "authors": "Han Y, Amin HM, Franko B, Frantz C, Shi X, Lai R", "reference": { "type": "PubMed", "id": "16825495", "url": "https://pubmed.ncbi.nlm.nih.gov/16825495" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": "Ribosome-binding protein 1", "gene_name": "RRBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM73-1", "protein_name": "ALK tyrosine kinase receptor", "gene_name": "ALK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UXT8-1", "protein_name": "ALK and LTK ligand 1", "gene_name": "ALKAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75688-1", "protein_name": "Protein phosphatase 1B", "gene_name": "PPM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14203-1", "protein_name": "Dynactin subunit 1", "gene_name": 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"uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29350-1", "protein_name": "Tyrosine-protein phosphatase non-receptor type 6", "gene_name": "PTPN6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86W92-1", "protein_name": "Liprin-beta-1", "gene_name": "PPFIBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWI1-1", "protein_name": "LIM domain only protein 7", "gene_name": "LMO7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52333-1", "protein_name": "Tyrosine-protein kinase JAK3", "gene_name": "JAK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06748-1", "protein_name": "Nucleophosmin", "gene_name": "NPM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43815-1", "protein_name": "Striatin", "gene_name": "STRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01106-2", "protein_name": "Myc proto-oncogene protein", "gene_name": "MYC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21246-1", "protein_name": "Pleiotrophin", "gene_name": "PTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { 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"count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Restoration of shp1 expression by 5-AZA-2'-deoxycytidine is associated with downregulation of JAK3/STAT3 signaling in ALK-positive anaplastic large cell lymphoma.", "journal": "Leukemia", "date": "2006", "authors": "Han Y, Amin HM, Frantz C, Franko B, Lee J, Lin Q, Lai R", "reference": { "type": "PubMed", "id": "16871283", "url": "https://pubmed.ncbi.nlm.nih.gov/16871283" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": 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"protein_name": "N-myc proto-oncogene protein", "gene_name": "MYCN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42336-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform", "gene_name": "PIK3CA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WU20-1", "protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "FRS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00291-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "HIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29350-1", "protein_name": "Tyrosine-protein phosphatase non-receptor type 6", "gene_name": "PTPN6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86W92-1", "protein_name": "Liprin-beta-1", "gene_name": "PPFIBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWI1-1", "protein_name": "LIM domain only protein 7", "gene_name": "LMO7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52333-1", "protein_name": "Tyrosine-protein kinase JAK3", "gene_name": "JAK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06748-1", "protein_name": "Nucleophosmin", "gene_name": "NPM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43815-1", "protein_name": "Striatin", "gene_name": "STRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": "MCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor 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"uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01106-2", "protein_name": "Myc proto-oncogene protein", "gene_name": "MYC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21246-1", "protein_name": "Pleiotrophin", "gene_name": "PTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21741-1", "protein_name": "Midkine", "gene_name": "MDK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase 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"url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16871283", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 67 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "JSI-124 (cucurbitacin I) inhibits Janus kinase-3/signal transducer and activator of transcription-3 signalling, downregulates nucleophosmin-anaplastic lymphoma kinase (ALK), and induces apoptosis in ALK-positive anaplastic large cell lymphoma cells.", "journal": "British journal of haematology", "date": "2006", "authors": "Shi X, Franko B, Frantz C, Amin HM, Lai R", "reference": { "type": "PubMed", "id": "16939498", "url": "https://pubmed.ncbi.nlm.nih.gov/16939498" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": "Ribosome-binding protein 1", "gene_name": "RRBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM73-1", "protein_name": "ALK tyrosine kinase receptor", "gene_name": "ALK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UXT8-1", "protein_name": "ALK and LTK ligand 1", "gene_name": "ALKAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75688-1", "protein_name": "Protein phosphatase 1B", "gene_name": "PPM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14203-1", "protein_name": "Dynactin subunit 1", "gene_name": "DCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UX46-1", "protein_name": "ALK and LTK ligand 2", "gene_name": "ALKAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45984-1", "protein_name": "Mitogen-activated protein kinase 9", "gene_name": "MAPK9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04198-1", "protein_name": "N-myc proto-oncogene protein", "gene_name": "MYCN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42336-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform", "gene_name": "PIK3CA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WU20-1", "protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "FRS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00291-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "HIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29350-1", "protein_name": "Tyrosine-protein phosphatase non-receptor type 6", "gene_name": "PTPN6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86W92-1", "protein_name": "Liprin-beta-1", "gene_name": "PPFIBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWI1-1", "protein_name": "LIM domain only protein 7", "gene_name": "LMO7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52333-1", "protein_name": "Tyrosine-protein kinase JAK3", "gene_name": "JAK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06748-1", "protein_name": "Nucleophosmin", "gene_name": "NPM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43815-1", "protein_name": "Striatin", "gene_name": "STRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": "MCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29597-1", "protein_name": "Non-receptor tyrosine-protein kinase TYK2", "gene_name": "TYK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33176-1", "protein_name": "Kinesin-1 heavy chain", "gene_name": "KIF5B", "tax_name": 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factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16939498", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 67 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of multiple SNT-binding sites on NPM-ALK oncoprotein and their involvement in cell transformation.", "journal": "Oncogene", "date": "2007", "authors": "Chikamori M, Fujimoto J, Tokai-Nishizumi N, Yamamoto T", "reference": { "type": "PubMed", "id": "17086210", "url": "https://pubmed.ncbi.nlm.nih.gov/17086210" }, "referenced_glycans": [], 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"Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06748-1", "protein_name": "Nucleophosmin", "gene_name": "NPM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43815-1", "protein_name": "Striatin", "gene_name": "STRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": "MCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": 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"Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21246-1", "protein_name": "Pleiotrophin", "gene_name": "PTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": 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{ "uniprot_canonical_ac": "P21741-1", "protein_name": "Midkine", "gene_name": "MDK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Oncogenic tyrosine kinase NPM/ALK induces activation of the rapamycin-sensitive mTOR signaling pathway.", "journal": "Oncogene", "date": "2007", "authors": "Marzec M, Kasprzycka M, Liu X, El-Salem M, Halasa K, Raghunath PN, Bucki R, Wlodarski P, Wasik MA", "reference": { "type": "PubMed", "id": "17353907", "url": "https://pubmed.ncbi.nlm.nih.gov/17353907" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": "Ribosome-binding protein 1", "gene_name": "RRBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM73-1", "protein_name": "ALK tyrosine kinase receptor", "gene_name": "ALK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UXT8-1", "protein_name": "ALK 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"protein_name": "Striatin", "gene_name": "STRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKV8-1", "protein_name": "Protein argonaute-2", "gene_name": "AGO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": "MCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9G7-1", "protein_name": "Protein 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"uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6W8-1", "protein_name": "Inducible T-cell costimulator", "gene_name": "ICOS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62753-1", "protein_name": "Small ribosomal subunit protein eS6", "gene_name": "RPS6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", 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"protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17416736", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 89 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The tyrosine phosphatase Shp2 interacts with NPM-ALK and regulates anaplastic lymphoma cell growth and migration.", "journal": "Cancer research", "date": "2007", "authors": "Voena C, Conte C, Ambrogio C, Boeri Erba E, Boccalatte F, Mohammed S, Jensen ON, Palestro G, Inghirami G, Chiarle R", "reference": { "type": "PubMed", "id": "17483340", "url": "https://pubmed.ncbi.nlm.nih.gov/17483340" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": "Ribosome-binding protein 1", "gene_name": "RRBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM73-1", "protein_name": "ALK tyrosine kinase receptor", "gene_name": "ALK", "tax_name": "Human" }, { 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"uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14635-1", "protein_name": "G2/mitotic-specific cyclin-B1", "gene_name": "CCNB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43403-1", "protein_name": "Tyrosine-protein kinase ZAP-70", "gene_name": "ZAP70", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27361-1", "protein_name": "Mitogen-activated protein kinase 3", "gene_name": "MAPK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10144-1", "protein_name": "Granzyme B", "gene_name": "GZMB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14222-1", "protein_name": "Perforin-1", "gene_name": "PRF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21741-1", "protein_name": "Midkine", "gene_name": "MDK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WB0-1", "protein_name": "Zinc finger C3HC-type protein 1", "gene_name": "ZC3HC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63208-1", "protein_name": "S-phase kinase-associated protein 1", "gene_name": "SKP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18097461", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 96 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, 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"Fibroblast growth factor receptor substrate 2", "gene_name": "FRS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01111-1", "protein_name": "GTPase NRas", "gene_name": "NRAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00291-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "HIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8C180-1", "protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "Frs2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09038-4", "protein_name": "Fibroblast growth factor 2", "gene_name": "FGF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86W92-1", "protein_name": "Liprin-beta-1", "gene_name": "PPFIBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWI1-1", "protein_name": "LIM domain only protein 7", "gene_name": "LMO7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07889-1", "protein_name": "Son of sevenless homolog 1", "gene_name": "SOS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10767-1", "protein_name": "Fibroblast growth factor 6", "gene_name": "FGF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43320-1", "protein_name": "Fibroblast growth factor 16", "gene_name": "FGF16", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95750-1", "protein_name": "Fibroblast growth factor 19", "gene_name": "FGF19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08620-1", "protein_name": "Fibroblast growth factor 4", "gene_name": "FGF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11487-1", "protein_name": "Fibroblast growth factor 3", "gene_name": "FGF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21781-1", "protein_name": "Fibroblast growth factor 7", "gene_name": "FGF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23352-1", "protein_name": "Anosmin-1", "gene_name": "ANOS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31371-1", "protein_name": "Fibroblast growth factor 9", "gene_name": "FGF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06748-1", "protein_name": "Nucleophosmin", "gene_name": "NPM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43815-1", "protein_name": "Striatin", "gene_name": "STRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": "MCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06124-2", "protein_name": "Tyrosine-protein phosphatase non-receptor type 11", "gene_name": "PTPN11", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05230-1", "protein_name": "Fibroblast growth factor 1", "gene_name": "FGF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29597-1", "protein_name": "Non-receptor tyrosine-protein kinase TYK2", "gene_name": "TYK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCT0-1", "protein_name": "Fibroblast growth factor 22", "gene_name": "FGF22", "tax_name": "Human" }, { "uniprot_canonical_ac": "O76093-1", "protein_name": "Fibroblast growth factor 18", "gene_name": "FGF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33176-1", "protein_name": "Kinesin-1 heavy chain", "gene_name": "KIF5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13501-1", "protein_name": "Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27361-1", "protein_name": "Mitogen-activated protein kinase 3", "gene_name": "MAPK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22455-1", "protein_name": "Fibroblast growth factor receptor 4", "gene_name": "FGFR4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZV9-1", "protein_name": "Fibroblast growth factor 23", "gene_name": "FGF23", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP95-1", "protein_name": "Fibroblast growth factor 20", "gene_name": "FGF20", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86Z14-1", "protein_name": "Beta-klotho", "gene_name": "KLB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22681-1", "protein_name": "E3 ubiquitin-protein ligase CBL", "gene_name": "CBL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18452557", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 84 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { 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YL, Takeuchi K, Soda M, Inamura K, Togashi Y, Hatano S, Enomoto M, Hamada T, Haruta H, Watanabe H, Kurashina K, Hatanaka H, Ueno T, Takada S, Yamashita Y, Sugiyama Y, Ishikawa Y, Mano H", "reference": { "type": "PubMed", "id": "18593892", "url": "https://pubmed.ncbi.nlm.nih.gov/18593892" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": "Ribosome-binding protein 1", "gene_name": "RRBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM73-1", "protein_name": "ALK tyrosine kinase receptor", "gene_name": "ALK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75688-1", "protein_name": "Protein phosphatase 1B", "gene_name": "PPM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14203-1", "protein_name": "Dynactin subunit 1", "gene_name": "DCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45984-1", "protein_name": "Mitogen-activated protein kinase 9", "gene_name": "MAPK9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42336-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform", "gene_name": "PIK3CA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WU20-1", "protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "FRS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00291-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "HIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86W92-1", "protein_name": "Liprin-beta-1", "gene_name": "PPFIBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWI1-1", "protein_name": "LIM domain only protein 7", "gene_name": "LMO7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06748-1", "protein_name": "Nucleophosmin", "gene_name": "NPM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43815-1", "protein_name": "Striatin", "gene_name": "STRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": "MCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29597-1", "protein_name": "Non-receptor tyrosine-protein 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "EML4-ALK fusion gene and efficacy of an ALK kinase inhibitor in lung cancer.", "journal": "Clinical cancer research : an official journal of the American Association for Cancer Research", "date": "2008", "authors": "Koivunen JP, Mermel C, Zejnullahu K, Murphy C, Lifshits E, Holmes AJ, Choi HG, Kim J, Chiang D, Thomas R, Lee J, Richards WG, Sugarbaker DJ, Ducko C, Lindeman N, Marcoux JP, Engelman JA, Gray NS, Lee C, Meyerson M, Janne PA", "reference": { "type": "PubMed", "id": "18594010", "url": "https://pubmed.ncbi.nlm.nih.gov/18594010" }, 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"uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": "MCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29597-1", "protein_name": "Non-receptor tyrosine-protein kinase TYK2", "gene_name": "TYK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33176-1", "protein_name": "Kinesin-1 heavy chain", "gene_name": "KIF5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13501-1", "protein_name": "Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "An inflammatory myofibroblastic tumor in liver with ALK and RANBP2 gene rearrangement: combination of distinct morphologic, immunohistochemical, and genetic features.", "journal": "Human pathology", "date": "2008", "authors": "Chen ST, Lee JC", "reference": { "type": "PubMed", "id": "18701132", "url": "https://pubmed.ncbi.nlm.nih.gov/18701132" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": "Ribosome-binding protein 1", "gene_name": "RRBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM73-1", "protein_name": "ALK tyrosine kinase receptor", "gene_name": "ALK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75688-1", 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protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86W92-1", "protein_name": "Liprin-beta-1", "gene_name": "PPFIBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWI1-1", "protein_name": "LIM domain only protein 7", "gene_name": "LMO7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 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"uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29597-1", "protein_name": "Non-receptor tyrosine-protein kinase TYK2", "gene_name": "TYK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33176-1", "protein_name": "Kinesin-1 heavy chain", "gene_name": "KIF5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13501-1", "protein_name": "Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18701132", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of ALK as a major familial neuroblastoma predisposition gene.", "journal": "Nature", "date": "2008", "authors": "Mosse YP, Laudenslager M, Longo L, Cole KA, Wood A, Attiyeh EF, Laquaglia MJ, Sennett R, Lynch JE, Perri P, Laureys G, Speleman F, Kim C, Hou C, Hakonarson H, Torkamani A, Schork 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18724359", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 67 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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"uniprot_canonical_ac": "Q9UBQ7-1", "protein_name": "Glyoxylate reductase/hydroxypyruvate reductase", "gene_name": "GRHPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14469-1", "protein_name": "Transcription factor HES-1", "gene_name": "HES1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5B9-1", "protein_name": "FACT complex subunit SPT16", "gene_name": "SUPT16H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JTV8-1", "protein_name": "Torsin-1A-interacting protein 1", "gene_name": "TOR1AIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27797-1", "protein_name": "Calreticulin", "gene_name": "CALR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13107-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 4", "gene_name": "USP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30154-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform", "gene_name": "PPP2R1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18802091", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 31 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWI1-1", "protein_name": "LIM domain only protein 7", "gene_name": "LMO7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06748-1", "protein_name": "Nucleophosmin", "gene_name": "NPM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43815-1", "protein_name": "Striatin", "gene_name": "STRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": "MCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29597-1", "protein_name": "Non-receptor tyrosine-protein kinase TYK2", "gene_name": "TYK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33176-1", "protein_name": "Kinesin-1 heavy chain", "gene_name": "KIF5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13501-1", "protein_name": "Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase 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"url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18923525", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 59 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The FRS2 family of docking/scaffolding adaptor proteins as therapeutic targets of cancer treatment.", "journal": "Expert opinion on therapeutic targets", "date": "2009", "authors": "Sato T, Gotoh N", "reference": { "type": "PubMed", "id": "19456272", "url": "https://pubmed.ncbi.nlm.nih.gov/19456272" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": "Ribosome-binding protein 1", "gene_name": "RRBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM73-1", "protein_name": "ALK tyrosine kinase receptor", "gene_name": "ALK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75688-1", "protein_name": "Protein phosphatase 1B", "gene_name": "PPM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14203-1", "protein_name": "Dynactin subunit 1", "gene_name": "DCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45984-1", "protein_name": "Mitogen-activated protein kinase 9", "gene_name": "MAPK9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42336-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform", "gene_name": "PIK3CA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WU20-1", "protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "FRS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00291-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "HIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86W92-1", "protein_name": "Liprin-beta-1", "gene_name": "PPFIBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWI1-1", "protein_name": "LIM domain only protein 7", "gene_name": "LMO7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06748-1", "protein_name": "Nucleophosmin", "gene_name": "NPM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43815-1", "protein_name": "Striatin", "gene_name": "STRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": "MCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29597-1", "protein_name": "Non-receptor tyrosine-protein kinase TYK2", "gene_name": "TYK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33176-1", "protein_name": "Kinesin-1 heavy chain", "gene_name": "KIF5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13501-1", "protein_name": "Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": 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[] } ] }, { "title": "Structural basis for the recognition of nucleophosmin-anaplastic lymphoma kinase oncoprotein by the phosphotyrosine binding domain of Suc1-associated neurotrophic factor-induced tyrosine-phosphorylated target-2.", "journal": "Journal of structural and functional genomics", "date": "2010", "authors": "Koshiba S, Li H, Motoda Y, Tomizawa T, Kasai T, Tochio N, Yabuki T, Harada T, Watanabe S, Tanaka A, Shirouzu M, Kigawa T, Yamamoto T, Yokoyama S", "reference": { "type": "PubMed", "id": "20454865", "url": "https://pubmed.ncbi.nlm.nih.gov/20454865" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": "Ribosome-binding protein 1", "gene_name": "RRBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM73-1", "protein_name": "ALK tyrosine kinase receptor", "gene_name": "ALK", "tax_name": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20454865", "abstract": "", "glycosylation": [], 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"GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21134980", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 59 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", 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{ "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Epithelioid inflammatory myofibroblastic sarcoma: An aggressive intra-abdominal variant of inflammatory myofibroblastic tumor with nuclear membrane or perinuclear ALK.", "journal": "The American journal of surgical pathology", "date": "2011", "authors": "Marino-Enriquez A, Wang WL, Roy A, Lopez-Terrada D, Lazar AJ, Fletcher CD, Coffin CM, Hornick JL", "reference": { "type": "PubMed", "id": "21164297", "url": "https://pubmed.ncbi.nlm.nih.gov/21164297" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": "Ribosome-binding protein 1", "gene_name": "RRBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM73-1", "protein_name": "ALK tyrosine kinase receptor", "gene_name": "ALK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75688-1", "protein_name": "Protein phosphatase 1B", "gene_name": "PPM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14203-1", "protein_name": "Dynactin subunit 1", "gene_name": "DCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45984-1", "protein_name": "Mitogen-activated protein kinase 9", "gene_name": "MAPK9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42336-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform", "gene_name": "PIK3CA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WU20-1", "protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "FRS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00291-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "HIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86W92-1", "protein_name": "Liprin-beta-1", "gene_name": "PPFIBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWI1-1", "protein_name": "LIM domain only protein 7", "gene_name": "LMO7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06748-1", "protein_name": "Nucleophosmin", "gene_name": "NPM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43815-1", "protein_name": "Striatin", "gene_name": "STRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": "MCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29597-1", "protein_name": "Non-receptor tyrosine-protein kinase TYK2", "gene_name": "TYK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33176-1", "protein_name": "Kinesin-1 heavy chain", "gene_name": "KIF5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13501-1", "protein_name": "Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21164297", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 59 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "ALK rearrangement in sickle cell trait-associated renal medullary carcinoma.", "journal": "Genes, chromosomes & cancer", "date": "2011", "authors": "Marino-Enriquez A, Ou WB, Weldon CB, Fletcher JA, Perez-Atayde AR", "reference": { "type": "PubMed", "id": "21213368", "url": "https://pubmed.ncbi.nlm.nih.gov/21213368" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": "Ribosome-binding protein 1", "gene_name": "RRBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM73-1", "protein_name": "ALK tyrosine kinase receptor", "gene_name": "ALK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75688-1", "protein_name": "Protein phosphatase 1B", "gene_name": "PPM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14203-1", "protein_name": "Dynactin subunit 1", "gene_name": "DCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45984-1", "protein_name": "Mitogen-activated protein kinase 9", "gene_name": "MAPK9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42336-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform", "gene_name": "PIK3CA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WU20-1", "protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "FRS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00291-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "HIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86W92-1", "protein_name": "Liprin-beta-1", "gene_name": "PPFIBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWI1-1", "protein_name": "LIM domain only protein 7", "gene_name": "LMO7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P29597-1", "protein_name": "Non-receptor tyrosine-protein kinase TYK2", "gene_name": "TYK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33176-1", "protein_name": "Kinesin-1 heavy chain", "gene_name": "KIF5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13501-1", "protein_name": "Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21213368", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 59 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Role of ERK-BIM and STAT3-survivin signaling pathways in ALK inhibitor-induced apoptosis in EML4-ALK-positive lung cancer.", "journal": "Clinical cancer research : an official journal of the American Association for Cancer Research", "date": "2011", "authors": "Takezawa K, Okamoto I, Nishio K, Janne PA, Nakagawa K", "reference": { "type": "PubMed", "id": "21415216", "url": "https://pubmed.ncbi.nlm.nih.gov/21415216" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": "Ribosome-binding protein 1", "gene_name": "RRBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM73-1", "protein_name": "ALK tyrosine kinase receptor", "gene_name": "ALK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75688-1", "protein_name": "Protein phosphatase 1B", "gene_name": "PPM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14203-1", "protein_name": "Dynactin subunit 1", "gene_name": "DCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45984-1", "protein_name": "Mitogen-activated protein kinase 9", "gene_name": "MAPK9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42336-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform", "gene_name": "PIK3CA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WU20-1", "protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "FRS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00291-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "HIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 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"protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29597-1", "protein_name": "Non-receptor tyrosine-protein kinase TYK2", "gene_name": "TYK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33176-1", "protein_name": "Kinesin-1 heavy chain", "gene_name": "KIF5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13501-1", "protein_name": "Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", 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"total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", 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[] } ] }, { "title": "Identification of new ALK and RET gene fusions from colorectal and lung cancer biopsies.", "journal": "Nature medicine", "date": "2012", "authors": "Lipson D, Capelletti M, Yelensky R, Otto G, Parker A, Jarosz M, Curran JA, Balasubramanian S, Bloom T, Brennan KW, Donahue A, Downing SR, Frampton GM, Garcia L, Juhn F, Mitchell KC, White E, White J, Zwirko Z, Peretz T, Nechushtan H, Soussan-Gutman L, Kim J, Sasaki H, Kim HR, Park SI, Ercan D, Sheehan CE, Ross JS, Cronin MT, Janne PA, Stephens PJ", "reference": { "type": "PubMed", "id": "22327622", "url": "https://pubmed.ncbi.nlm.nih.gov/22327622" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26641-1", "protein_name": "Elongation factor 1-gamma", "gene_name": "EEF1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E9-1", "protein_name": "Ribosome-binding protein 1", "gene_name": "RRBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM73-1", "protein_name": "ALK tyrosine kinase receptor", "gene_name": "ALK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75688-1", "protein_name": "Protein phosphatase 1B", "gene_name": "PPM1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14203-1", "protein_name": "Dynactin subunit 1", "gene_name": "DCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45984-1", "protein_name": "Mitogen-activated protein kinase 9", "gene_name": "MAPK9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42336-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform", "gene_name": "PIK3CA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WU20-1", "protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "FRS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00291-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "HIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18206-1", "protein_name": "Vinculin", "gene_name": "VCL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06753-1", "protein_name": "Tropomyosin alpha-3 chain", "gene_name": "TPM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86W92-1", "protein_name": "Liprin-beta-1", "gene_name": "PPFIBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWI1-1", "protein_name": "LIM domain only protein 7", "gene_name": "LMO7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06748-1", "protein_name": "Nucleophosmin", "gene_name": "NPM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43815-1", "protein_name": "Striatin", "gene_name": "STRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07820-1", "protein_name": "Induced myeloid leukemia cell differentiation protein Mcl-1", "gene_name": "MCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43559-1", "protein_name": "Fibroblast growth factor receptor substrate 3", "gene_name": "FRS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29597-1", "protein_name": "Non-receptor tyrosine-protein kinase TYK2", "gene_name": "TYK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33176-1", "protein_name": "Kinesin-1 heavy chain", "gene_name": "KIF5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13501-1", "protein_name": "Sequestosome-1", "gene_name": "SQSTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07866-1", "protein_name": "Kinesin light chain 1", "gene_name": "KLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35568-1", "protein_name": "Insulin receptor substrate 1", "gene_name": "IRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR09-1", "protein_name": "Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6", "gene_name": "BIRC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZJ5-1", "protein_name": "Eukaryotic translation initiation factor 2-alpha kinase 3", "gene_name": "EIF2AK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX6-1", "protein_name": "Interleukin-22", "gene_name": "IL22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31939-1", "protein_name": "Bifunctional purine biosynthesis protein ATIC", "gene_name": "ATIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49589-1", "protein_name": "Cysteine--tRNA ligase, cytoplasmic", "gene_name": "CARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67936-1", "protein_name": "Tropomyosin alpha-4 chain", "gene_name": "TPM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R7-1", "protein_name": "WD repeat and coiled-coil-containing protein", "gene_name": "WDCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H165-1", "protein_name": "BCL11 transcription factor A", "gene_name": "BCL11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42224-1", "protein_name": "Signal transducer and activator of transcription 1-alpha/beta", "gene_name": "STAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC35-1", "protein_name": "Echinoderm microtubule-associated protein-like 4", "gene_name": "EML4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P26641", "url": "https://www.uniprot.org/uniprotkb/P26641" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22327622", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 59 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", 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