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leucine zipper (Nrl) is regulated by c-Jun N-terminal kinase and Tip60 during retina development.", "journal": "Molecular and cellular biology", "date": "2012", "authors": "Kim JW, Jang SM, Kim CH, An JH, Choi KH", "reference": { "type": "PubMed", "id": "22354990", "url": "https://pubmed.ncbi.nlm.nih.gov/22354990" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P54846-1", "protein_name": "Neural retina-specific leucine zipper protein", "gene_name": "Nrl", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P54846", "url": "https://www.uniprot.org/uniprotkb/P54846" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "phosphorylation": [ { "start_pos": 50, "end_pos": 50, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P54846", "url": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Regulatory expression of Neurensin-1 in the spinal motor neurons after mouse sciatic nerve injury.", "journal": "Neuroscience letters", "date": "2007", "authors": "Suzuki H, Tohyama K, Nagata K, Taketani S, Araki M", "reference": { "type": "PubMed", "id": "17566649", "url": "https://pubmed.ncbi.nlm.nih.gov/17566649" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P97799-1", "protein_name": "Neurensin-1", "gene_name": "Nrsn1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P97799", "url": "https://www.uniprot.org/uniprotkb/P97799" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.17566649", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "SLC7A14 imports GABA to lysosomes and impairs hepatic insulin sensitivity via inhibiting mTORC2.", "journal": "Cell reports", "date": "2023-01-31", "authors": "Jiang Xiaoxue, Liu Kan, Jiang Haizhou, Yin Hanrui, Wang En-Duo, Cheng Hong, Yuan Feixiang, Xiao Fei, Wang Fenfen, Lu Wei, Peng Bo, Shu Yousheng, Li Xiaoying, Chen Shanghai, Guo Feifan", "reference": { "type": "PubMed", "id": "36640347", "url": "https://pubmed.ncbi.nlm.nih.gov/36640347" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BXR1-1", "protein_name": "Solute carrier family 7 member 14", "gene_name": "Slc7a14", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BXR1", "url": "https://www.uniprot.org/uniprotkb/Q8BXR1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.36640347", 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Comp. Neurol.", "date": "1998", "authors": "Menn B, Timsit S, Calothy G, Lamballe F", "reference": { "type": "PubMed", "id": "9802700", "url": "https://pubmed.ncbi.nlm.nih.gov/9802700" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6VNS1-1", "protein_name": "NT-3 growth factor receptor", "gene_name": "Ntrk3", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q6VNS1", "url": "https://www.uniprot.org/uniprotkb/Q6VNS1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.9802700", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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[] } ] }, { "title": "Regulation of Ikappa B kinase (IKK)gamma /NEMO function by IKKbeta -mediated phosphorylation.", "journal": "The Journal of biological chemistry", "date": "2002", "authors": "Prajapati S, Gaynor RB", "reference": { "type": "PubMed", "id": "11971901", "url": "https://pubmed.ncbi.nlm.nih.gov/11971901" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O88522-1", "protein_name": "NF-kappa-B essential modulator", "gene_name": "Ikbkg", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O88522", "url": "https://www.uniprot.org/uniprotkb/O88522" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 369, "end_pos": 369, "sequence_org": "S", "sequence_mut": "A", "comment": "Decreases phosphorylation and increases NF-kappa-B activity.", "evidence": [ { "database": "UniProtKB", "id": 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[et al.]", "date": "2023-08", "authors": "Tang Xiaoyan, Weng Ruiqiang, Guo Guixian, Wei Juexian, Wu Xueqiang, Chen Bin, Liu Sudong, Zhong Zhixiong, Chen Xiaohui", "reference": { "type": "PubMed", "id": "37436447", "url": "https://pubmed.ncbi.nlm.nih.gov/37436447" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O88522-1", "protein_name": "NF-kappa-B essential modulator", "gene_name": "Ikbkg", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O88522", "url": "https://www.uniprot.org/uniprotkb/O88522" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.37436447", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Chem.", "date": "2000", "authors": "Nishi T, Forgac M", "reference": { "type": "PubMed", "id": "10702241", "url": "https://pubmed.ncbi.nlm.nih.gov/10702241" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P15920-1", "protein_name": "V-type proton ATPase 116 kDa subunit a 2", "gene_name": "Atp6v0a2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Z1G4-1", "protein_name": "V-type proton ATPase 116 kDa subunit a 1", "gene_name": "Atp6v0a1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P15920", "url": "https://www.uniprot.org/uniprotkb/P15920" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.10702241", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Three subunit a isoforms of mouse vacuolar H+-ATPase. 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The rod synapse in aging wildtype and Dscaml1 mutant mice.", "journal": "PloS one", "date": "2023", "authors": "Clemons Mellisa R, Dimico Ren H, Black Cailyn, Schlussler Megan K, Camerino Michael J, Aldinger-Gibson Kirah, Bartle Amaris, Reynolds Nathan, Eisenbrandt Dylan, Rogers Aspen, Andrianu John, Bruce Bradley, Elliot Arthur, Breazeal Tom, Griffin Hannah, Murphy Molly K, Fuerst Peter G", "reference": { "type": "PubMed", "id": "37910517", "url": "https://pubmed.ncbi.nlm.nih.gov/37910517" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q4VA61-1", "protein_name": "Cell adhesion molecule DSCAML1", "gene_name": "Dscaml1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q4VA61", "url": "https://www.uniprot.org/uniprotkb/Q4VA61" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.37910517", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": 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Abolishes ryanodine binding.", "evidence": [ { "database": "UniProtKB", "id": "E9Q401", "url": "https://www.uniprot.org/uniprotkb/E9Q401" }, { "database": "PubMed", "id": "10473538", "url": "https://pubmed.ncbi.nlm.nih.gov/10473538" } ], "uniprot_canonical_ac": "E9Q401-1" } ], "record_id": "pubmed.10473538", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Crystal structures of the N-terminal domains of cardiac and skeletal muscle ryanodine receptors: insights into disease mutations.", "journal": "Structure (London, England : 1993)", "date": "2009", "authors": "Lobo PA, Van Petegem F", "reference": { "type": "PubMed", "id": "19913485", "url": "https://pubmed.ncbi.nlm.nih.gov/19913485" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "E9Q401-1", "protein_name": "Ryanodine receptor 2", "gene_name": "Ryr2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "E9Q401", "url": "https://www.uniprot.org/uniprotkb/E9Q401" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 186, "end_pos": 186, "sequence_org": "V", "sequence_mut": "M", "comment": "No change to global protein fold or protein stability. Alters local protein folding.", "evidence": [ { "database": "UniProtKB", "id": "E9Q401", "url": "https://www.uniprot.org/uniprotkb/E9Q401" }, { "database": "PubMed", "id": "19913485", "url": "https://pubmed.ncbi.nlm.nih.gov/19913485" } ], "uniprot_canonical_ac": "E9Q401-1" }, { "start_pos": 77, "end_pos": 77, "sequence_org": "A", "sequence_mut": "V", "comment": "No change to global protein fold or protein stability. 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Erythroid transcription factor NF-E2 is a haematopoietic-specific basic-leucine zipper protein.", "journal": "Nature", "date": "1993", "authors": "Andrews N C, Erdjument-Bromage H, Davidson M B, Tempst P, Orkin S H", "reference": { "type": "PubMed", "id": "8469283", "url": "https://pubmed.ncbi.nlm.nih.gov/8469283" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q07279-1", "protein_name": "Transcription factor NF-E2 45 kDa subunit", "gene_name": "Nfe2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q07279", "url": "https://www.uniprot.org/uniprotkb/Q07279" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.8469283", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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