[ { "title": "Covalent catalysis in nucleotidyl transfer reactions: essential motifs in Saccharomyces cerevisiae RNA capping enzyme are conserved in Schizosaccharomyces pombe and viral capping enzymes and among polynucleotide ligases.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "1994-12-06", "authors": "Shuman S, Liu Y, Schwer B", "reference": { "type": "PubMed", "id": "7991582", "url": "https://pubmed.ncbi.nlm.nih.gov/7991582" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q01159-1", "protein_name": "mRNA-capping enzyme subunit alpha", "gene_name": "CEG1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "Q01159", "url": "https://www.uniprot.org/uniprotkb/Q01159" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "mutagenesis": [ { "start_pos": 107, "end_pos": 109, "sequence_org": "RFP", "sequence_mut": "AAA", "comment": "Reduced growth at 25 degrees and lethal at 37 degrees.", "evidence": [ { "database": "UniProtKB", "id": "Q01159", "url": "https://www.uniprot.org/uniprotkb/Q01159" }, { "database": "PubMed", "id": "7991582", "url": "https://pubmed.ncbi.nlm.nih.gov/7991582" } ], "uniprot_canonical_ac": "Q01159-1" }, { "start_pos": 114, "end_pos": 114, "sequence_org": "K", "sequence_mut": "A", "comment": "No effect.", "evidence": [ { "database": "UniProtKB", "id": "Q01159", "url": "https://www.uniprot.org/uniprotkb/Q01159" }, { "database": "PubMed", "id": "7991582", "url": "https://pubmed.ncbi.nlm.nih.gov/7991582" } ], "uniprot_canonical_ac": "Q01159-1" }, { "start_pos": 115, "end_pos": 115, "sequence_org": "K", "sequence_mut": "A", "comment": "No effect.", "evidence": [ { "database": "UniProtKB", "id": "Q01159", "url": "https://www.uniprot.org/uniprotkb/Q01159" }, { "database": "PubMed", "id": 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"comment": "No effect.", "evidence": [ { "database": "UniProtKB", "id": "Q01159", "url": "https://www.uniprot.org/uniprotkb/Q01159" }, { "database": "PubMed", "id": "7991582", "url": "https://pubmed.ncbi.nlm.nih.gov/7991582" } ], "uniprot_canonical_ac": "Q01159-1" }, { "start_pos": 219, "end_pos": 219, "sequence_org": "K", "sequence_mut": "A", "comment": "No effect.", "evidence": [ { "database": "UniProtKB", "id": "Q01159", "url": "https://www.uniprot.org/uniprotkb/Q01159" }, { "database": "PubMed", "id": "7991582", "url": "https://pubmed.ncbi.nlm.nih.gov/7991582" } ], "uniprot_canonical_ac": "Q01159-1" }, { "start_pos": 225, "end_pos": 225, "sequence_org": "D", "sequence_mut": "A", "comment": "Lethal.", "evidence": [ { "database": "UniProtKB", "id": "Q01159", "url": "https://www.uniprot.org/uniprotkb/Q01159" }, { "database": "PubMed", "id": "7991582", "url": "https://pubmed.ncbi.nlm.nih.gov/7991582" } ], "uniprot_canonical_ac": "Q01159-1" }, { "start_pos": 226, "end_pos": 226, 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U.S.A.", "date": "2014", "authors": "Unverdorben Pia, Beck Florian, \u015aled\u017a Pawe\u0142, Schweitzer Andreas, Pfeifer G\u00fcnter, Plitzko J\u00fcrgen M, Baumeister Wolfgang, F\u00f6rster Friedrich", "reference": { "type": "PubMed", "id": "24706844", "url": "https://pubmed.ncbi.nlm.nih.gov/24706844" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q06103-1", "protein_name": "26S proteasome regulatory subunit RPN7", "gene_name": "RPN7", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "Q06103", "url": "https://www.uniprot.org/uniprotkb/Q06103" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.24706844", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Cell", "date": "2000", "authors": "Yan Y, Barlev N A, Haley R H, Berger S L, Marmorstein R", "reference": { "type": "PubMed", "id": "11106757", "url": "https://pubmed.ncbi.nlm.nih.gov/11106757" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q08649-1", "protein_name": "Histone acetyltransferase ESA1", "gene_name": "ESA1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "Q08649", "url": "https://www.uniprot.org/uniprotkb/Q08649" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.11106757", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The catalytic mechanism of the ESA1 histone acetyltransferase involves a self-acetylated intermediate.", "journal": "Nature structural biology", "date": "2002-11", "authors": "Yan Yuan, Harper Sandy, Speicher David W, Marmorstein Ronen", "reference": { "type": "PubMed", "id": "12368900", "url": "https://pubmed.ncbi.nlm.nih.gov/12368900" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q08649-1", "protein_name": "Histone acetyltransferase ESA1", "gene_name": "ESA1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "Q08649", "url": "https://www.uniprot.org/uniprotkb/Q08649" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "mutagenesis": [ { "start_pos": 304, "end_pos": 304, "sequence_org": "C", "sequence_mut": "S", "comment": "Strongly reduces HAT activity, but is not lethal (in vivo). 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