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Sci.", "date": "2021", "authors": "Chen Zhanglin, Zhou Zuoqiong, Peng Xiyang, Sun Chenchen, Yang Dong, Li Chengli, Zhu Runkang, Zhang Ping, Zheng Lan, Tang Changfa", "reference": { "type": "PubMed", "id": "34749643", "url": "https://pubmed.ncbi.nlm.nih.gov/34749643" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A8HAM3-1", "protein_name": "Serum response factor", "gene_name": "srfa", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IMF6-1", "protein_name": "Eukaryotic translation initiation factor 4B", "gene_name": "eif4ba", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A8HAM3", "url": "https://www.uniprot.org/uniprotkb/A8HAM3" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.34749643", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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Biol. Chem.", "date": "2014", "authors": "Neacsu Cristian Dan, Ko Ya-Ping, Tagariello Andreas, R\u00f8kenes Karlsen Kristina, Neiss Wolfram Friedrich, Paulsson Mats, Wagener Raimund", "reference": { "type": "PubMed", "id": "24293366", "url": "https://pubmed.ncbi.nlm.nih.gov/24293366" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A5WWJ4-1", "protein_name": "Matrilin-1", "gene_name": "matn1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A5WWJ4", "url": "https://www.uniprot.org/uniprotkb/A5WWJ4" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.24293366", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Expression is demonstrated for two out of five novel genes.", "journal": "Plant Physiol.", "date": "2001", "authors": "Rosenquist M, Alsterfjord M, Larsson C, Sommarin M", "reference": { "type": "PubMed", "id": "11553742", "url": "https://pubmed.ncbi.nlm.nih.gov/11553742" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9C5W6-1", "protein_name": "14-3-3-like protein GF14 iota", "gene_name": "GRF12", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9C5W6", "url": "https://www.uniprot.org/uniprotkb/Q9C5W6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11553742", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "CFL1, a WW domain protein, regulates cuticle development by modulating the function of HDG1, a class IV homeodomain transcription factor, in rice and Arabidopsis.", "journal": "Plant Cell", "date": "2011", "authors": "Wu Renhong, Li Shibai, He Shan, Wassmann Friedrich, Yu Caihong, Qin Genji, Schreiber Lukas, Qu Li-Jia, Gu Hongya", "reference": { "type": "PubMed", "id": "21954461", "url": "https://pubmed.ncbi.nlm.nih.gov/21954461" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9C7E6-1", "protein_name": "Protein CURLY FLAG LEAF 2", "gene_name": "CFL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5HZ54-1", "protein_name": "Protein CURLY FLAG LEAF 1", "gene_name": "CFL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2E8-1", "protein_name": "Homeobox-leucine zipper protein HDG1", 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The E3 ubiquitin ligase activity of arabidopsis PLANT U-BOX17 and its functional tobacco homolog ACRE276 are required for cell death and defense.", "journal": "The Plant cell", "date": "2006-04", "authors": "Yang Cheng-Wei, Gonz\u00e1lez-Lamothe Roc\u00edo, Ewan Richard A, Rowland Owen, Yoshioka Hirofumi, Shenton Matt, Ye Heng, O'Donnell Elizabeth, Jones Jonathan D G, Sadanandom Ari", "reference": { "type": "PubMed", "id": "16531496", "url": "https://pubmed.ncbi.nlm.nih.gov/16531496" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9C7R6-1", "protein_name": "U-box domain-containing protein 17", "gene_name": "PUB17", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9C7R6", "url": 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thaliana atFAS4 gene whose overexpression results in the development of a fasciated stem.", "journal": "J. Proteomics Bioinform.", "date": "2008", "authors": "Pogorelko Gennady, Fursova Oksana, Klimov Eugene", "reference": { "type": "PubMed", "id": "19295920", "url": "https://pubmed.ncbi.nlm.nih.gov/19295920" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9C813-1", "protein_name": "ATP-dependent RNA helicase DEAH13", "gene_name": "FAS4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9C813", "url": "https://www.uniprot.org/uniprotkb/Q9C813" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19295920", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification and characterization of plant glycerophosphodiester phosphodiesterase.", "journal": "Biochem. 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Genet.", "date": "2002", "authors": "Mollier Pascale, Hoffmann Beate, Debast C\u00e9drig, Small Ian", "reference": { "type": "PubMed", "id": "11919680", "url": "https://pubmed.ncbi.nlm.nih.gov/11919680" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9CA19-1", "protein_name": "Small ribosomal subunit protein uS13m", "gene_name": "RPS13", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9CA19", "url": "https://www.uniprot.org/uniprotkb/Q9CA19" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11919680", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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novel Ca2+-binding protein that is induced by NaCl stress.", "journal": "Plant molecular biology", "date": "1998-07", "authors": "Jang H J, Pih K T, Kang S G, Lim J H, Jin J B, Piao H L, Hwang I", "reference": { "type": "PubMed", "id": "9678579", "url": "https://pubmed.ncbi.nlm.nih.gov/9678579" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FDX6-1", "protein_name": "Calcium-binding protein CP1", "gene_name": "CP1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FDX6", "url": "https://www.uniprot.org/uniprotkb/Q9FDX6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.9678579", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { 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protein At5g39720.1, a member of the AIG2-like protein family.", "journal": "Acta Crystallogr. F", "date": "2006", "authors": "Lytle Betsy L, Peterson Francis C, Tyler Ejan M, Newman Carrie L, Vinarov Dmitriy A, Markley John L, Volkman Brian F", "reference": { "type": "PubMed", "id": "16754964", "url": "https://pubmed.ncbi.nlm.nih.gov/16754964" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FIX2-1", "protein_name": "AIG2-like protein A", "gene_name": "AIG2LA; AIG2L", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FIX2", "url": "https://www.uniprot.org/uniprotkb/Q9FIX2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16754964", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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the reported ABA receptor, GCR2, in ABA control of seed germination and early seedling development in Arabidopsis.", "journal": "The Plant journal : for cell and molecular biology", "date": "2007-12", "authors": "Gao Yajun, Zeng Qingning, Guo Jianjun, Cheng Jia, Ellis Brian E, Chen Jin-Gui", "reference": { "type": "PubMed", "id": "17894782", "url": "https://pubmed.ncbi.nlm.nih.gov/17894782" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FJN7-1", "protein_name": "LanC-like protein GCL1", "gene_name": "GCL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IEM5-1", "protein_name": "LanC-like protein GCR2", "gene_name": "GCR2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FJN7", "url": "https://www.uniprot.org/uniprotkb/Q9FJN7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana 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N, Woo Dong-Hyuk, Le Dihn Huan, Lee Eun-Hye, Moon Yong-Hwan", "reference": { "type": "PubMed", "id": "24413693", "url": "https://pubmed.ncbi.nlm.nih.gov/24413693" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FFZ6-1", "protein_name": "Small RNA-binding protein 11, chloroplastic", "gene_name": "S-RBP11", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FFZ6", "url": "https://www.uniprot.org/uniprotkb/Q9FFZ6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.24413693", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" 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"HCF208, a homolog of Chlamydomonas CCB2, is required for accumulation of native cytochrome b6 in Arabidopsis thaliana.", "journal": "Plant & cell physiology", "date": "2007-12", "authors": "Lyska Dagmar, Paradies Susanne, Meierhoff Karin, Westhoff Peter", "reference": { "type": "PubMed", "id": "17971335", "url": "https://pubmed.ncbi.nlm.nih.gov/17971335" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FJ81-1", "protein_name": "Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic", "gene_name": "CCB2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FJ81", "url": "https://www.uniprot.org/uniprotkb/Q9FJ81" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17971335", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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selection of signaling pathways in plant defense.", "journal": "Plant J.", "date": "2006", "authors": "Li Jing, Brader G\u00fcnter, Kariola Tarja, Palva E Tapio", "reference": { "type": "PubMed", "id": "16623907", "url": "https://pubmed.ncbi.nlm.nih.gov/16623907" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FPJ5-1", "protein_name": "Leucine-rich repeat protein 1", "gene_name": "LRR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY00-1", "protein_name": "Probable WRKY transcription factor 70", "gene_name": "WRKY70", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FPJ5", "url": "https://www.uniprot.org/uniprotkb/Q9FPJ5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16623907", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular characterization of two anther-specific genes encoding putative RNA-binding proteins, AtRBP45s, in Arabidopsis thaliana.", "journal": "Genes Genet. Syst.", "date": "2006", "authors": "Park Jong-In, Endo Makoto, Kazama Tomohiko, Saito Hiroshi, Hakozaki Hirokazu, Takada Yoshinobu, Kawagishi-Kobayashi Makiko, Watanabe Masao", "reference": { "type": "PubMed", "id": "17159297", "url": "https://pubmed.ncbi.nlm.nih.gov/17159297" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FPJ8-1", "protein_name": "Polyadenylate-binding protein RBP45A", "gene_name": "RBP45A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SAB3-1", "protein_name": "Polyadenylate-binding protein RBP45B", "gene_name": "RBP45B", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FPJ8", "url": "https://www.uniprot.org/uniprotkb/Q9FPJ8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17159297", "abstract": "", "glycosylation": [], 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of an Arabidopsis thaliana mutant accumulating threonine resulting from mutation in a new dihydrodipicolinate synthase gene.", "journal": "Plant J.", "date": "2000", "authors": "Sarrobert C, Thibaud M C, Contard-David P, Gineste S, Bechtold N, Robaglia C, Nussaume L", "reference": { "type": "PubMed", "id": "11069709", "url": "https://pubmed.ncbi.nlm.nih.gov/11069709" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FVC8-1", "protein_name": "4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic", "gene_name": "DHDPS2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FVC8", "url": "https://www.uniprot.org/uniprotkb/Q9FVC8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11069709", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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Biol.", "date": "2001", "authors": "Orme W, Walker A R, Gupta R, Gray J C", "reference": { "type": "PubMed", "id": "11516154", "url": "https://pubmed.ncbi.nlm.nih.gov/11516154" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FYB5-1", "protein_name": "Chaperone protein dnaJ 11, chloroplastic", "gene_name": "ATJ11", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FYB5", "url": "https://www.uniprot.org/uniprotkb/Q9FYB5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11516154", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Bcp1, a gene required for male fertility in Arabidopsis.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "1995-03-14", "authors": "Xu H, Knox R B, Taylor P E, Singh M B", "reference": { "type": "PubMed", "id": "7892232", "url": "https://pubmed.ncbi.nlm.nih.gov/7892232" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FYL2-1", "protein_name": "Anther-specific protein BCP1", "gene_name": "BCP1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FYL2", "url": "https://www.uniprot.org/uniprotkb/Q9FYL2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.7892232", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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}, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis SMG7 protein is required for exit from meiosis.", "journal": "J. Cell Sci.", "date": "2008", "authors": "Riehs Nina, Akimcheva Svetlana, Puizina Jasna, Bulankova Petra, Idol Rachel A, Siroky Jiri, Schleiffer Alexander, Schweizer Dieter, Shippen Dorothy E, Riha Karel", "reference": { "type": "PubMed", "id": "18544632", "url": "https://pubmed.ncbi.nlm.nih.gov/18544632" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FZ99-1", "protein_name": "Nonsense-mediated mRNA decay factor SMG7-like", "gene_name": "SMG7L", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A9QM73-1", "protein_name": "Nonsense-mediated mRNA decay factor SMG7", "gene_name": "SMG7", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FZ99", "url": "https://www.uniprot.org/uniprotkb/Q9FZ99" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18544632", 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"authors": "Che Ping, Lall Sonia, Nettleton Dan, Howell Stephen H", "reference": { "type": "PubMed", "id": "16648215", "url": "https://pubmed.ncbi.nlm.nih.gov/16648215" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LP11-1", "protein_name": "AAA-ATPase At1g43910", "gene_name": "F9C16.7", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LP11", "url": "https://www.uniprot.org/uniprotkb/Q9LP11" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16648215", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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U.S.A.", "date": "2004", "authors": "Obrdlik Petr, El-Bakkoury Mohamed, Hamacher Tanja, Cappellaro Corinna, Vilarino Cristina, Fleischer Carola, Ellerbrok Heinz, Kamuzinzi Richard, Ledent Val\u00e9rie, Blaudez Damien, Sanders Dale, Revuelta Jose L, Boles Eckhard, Andr\u00e9 Bruno, Frommer Wolf B", "reference": { "type": "PubMed", "id": "15299147", "url": "https://pubmed.ncbi.nlm.nih.gov/15299147" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LPF6-1", "protein_name": "Probable purine permease 11", "gene_name": "PUP11", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LPF6", "url": "https://www.uniprot.org/uniprotkb/Q9LPF6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15299147", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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"Effects of the ALX/FPR2 receptors of lipoxin A4 on lung injury induced by fat embolism syndrome in rats.", "journal": "Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie", "date": "2019-04", "authors": "Gan Ning, Zhang Rong, Xu Xiaotao, Wang Yajie, Qi Aihua, Zhang Ying, Wang Aizhong", "reference": { "type": "PubMed", "id": "30784911", "url": "https://pubmed.ncbi.nlm.nih.gov/30784911" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A8I6AM80-1", "protein_name": "Formyl peptide receptor 2", "gene_name": "Fpr2", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "A0A8I6AM80", "url": "https://www.uniprot.org/uniprotkb/A0A8I6AM80" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.30784911", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": 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