[
{
"title": "Zebrafish Polycomb group gene ph2alpha is required for epiboly and tailbud formation acting downstream of FGF signaling.",
"journal": "Biochem. Biophys. Res. Commun.",
"date": "2005",
"authors": "Komoike Yuta, Kawamura Akinori, Shindo Norihisa, Sato Chie, Satoh Junichi, Shiurba Robert, Higashinakagawa Toru",
"reference": {
"type": "PubMed",
"id": "15707958",
"url": "https://pubmed.ncbi.nlm.nih.gov/15707958"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8QHL5-1",
"protein_name": "Polyhomeotic-like protein 2",
"gene_name": "phc2a; phc2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8QHL5",
"url": "https://www.uniprot.org/uniprotkb/Q8QHL5"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.15707958",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Localization of ammonia transporter Rhcg1 in mitochondrion-rich cells of yolk sac, gill, and kidney of zebrafish and its ionic strength-dependent expression.",
"journal": "Am. J. Physiol.",
"date": "2007",
"authors": "Nakada Tsutomu, Hoshijima Kazuyuki, Esaki Masahiro, Nagayoshi Saori, Kawakami Koichi, Hirose Shigehisa",
"reference": {
"type": "PubMed",
"id": "17686885",
"url": "https://pubmed.ncbi.nlm.nih.gov/17686885"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8JI14-1",
"protein_name": "Ammonium transporter Rh type C-like 2",
"gene_name": "rhcgb; rhcgl2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8JI14",
"url": "https://www.uniprot.org/uniprotkb/Q8JI14"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.17686885",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Ammonia excretion by the skin of zebrafish (Danio rerio) larvae.",
"journal": "Am. J. Physiol. Cell Physiol.",
"date": "2008",
"authors": "Shih Tin-Han, Horng Jiun-Lin, Hwang Pung-Pung, Lin Li-Yih",
"reference": {
"type": "PubMed",
"id": "18815227",
"url": "https://pubmed.ncbi.nlm.nih.gov/18815227"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8JI14-1",
"protein_name": "Ammonium transporter Rh type C-like 2",
"gene_name": "rhcgb; rhcgl2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8JI14",
"url": "https://www.uniprot.org/uniprotkb/Q8JI14"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.18815227",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "The responses of zebrafish (Danio rerio) to high external ammonia and urea transporter inhibition: nitrogen excretion and expression of rhesus glycoproteins and urea transporter proteins.",
"journal": "J. Exp. Biol.",
"date": "2009",
"authors": "Braun Marvin H, Steele Shelby L, Perry Steve F",
"reference": {
"type": "PubMed",
"id": "19915127",
"url": "https://pubmed.ncbi.nlm.nih.gov/19915127"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8JI14-1",
"protein_name": "Ammonium transporter Rh type C-like 2",
"gene_name": "rhcgb; rhcgl2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8JI14",
"url": "https://www.uniprot.org/uniprotkb/Q8JI14"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.19915127",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "The Rhesus glycoprotein Rhcgb is expendable for ammonia excretion and Na+ uptake in zebrafish (Danio rerio).",
"journal": "Comp. Biochem. Physiol., Part A Mol. Integr. Physiol.",
"date": "2020",
"authors": "Zimmer Alex M, Perry Steve F",
"reference": {
"type": "PubMed",
"id": "32437959",
"url": "https://pubmed.ncbi.nlm.nih.gov/32437959"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8JI14-1",
"protein_name": "Ammonium transporter Rh type C-like 2",
"gene_name": "rhcgb; rhcgl2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8JI14",
"url": "https://www.uniprot.org/uniprotkb/Q8JI14"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.32437959",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Expression of ion transport genes in ionocytes isolated from larval zebrafish (Danio rerio) exposed to acidic or Na+-deficient water.",
"journal": "Am. J. Physiol. Regul. Integr. Comp. Physiol.",
"date": "2020",
"authors": "Shir-Mohammadi K, Perry S F",
"reference": {
"type": "PubMed",
"id": "32755465",
"url": "https://pubmed.ncbi.nlm.nih.gov/32755465"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8JI14-1",
"protein_name": "Ammonium transporter Rh type C-like 2",
"gene_name": "rhcgb; rhcgl2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8JI14",
"url": "https://www.uniprot.org/uniprotkb/Q8JI14"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.32755465",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Respiratory responses to external ammonia in zebrafish (Danio rerio).",
"journal": "Comp. Biochem. Physiol., Part A Mol. Integr. Physiol.",
"date": "2021",
"authors": "Porteus Cosima, Kumai Yusuke, Abdallah Sara J, Yew Hong M, Kwong Raymond W M, Pan Yihang, Milsom William K, Perry Steve F",
"reference": {
"type": "PubMed",
"id": "33059022",
"url": "https://pubmed.ncbi.nlm.nih.gov/33059022"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8JI14-1",
"protein_name": "Ammonium transporter Rh type C-like 2",
"gene_name": "rhcgb; rhcgl2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8JI14",
"url": "https://www.uniprot.org/uniprotkb/Q8JI14"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.33059022",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Exposure to copper nanoparticles impairs ion uptake, and acid and ammonia excretion by ionocytes in zebrafish embryos.",
"journal": "Chemosphere",
"date": "2020",
"authors": "Lee Chih-Ying, Horng Jiun-Lin, Liu Sian-Tai, Lin Li-Yih",
"reference": {
"type": "PubMed",
"id": "33113650",
"url": "https://pubmed.ncbi.nlm.nih.gov/33113650"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8JI14-1",
"protein_name": "Ammonium transporter Rh type C-like 2",
"gene_name": "rhcgb; rhcgl2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8JI14",
"url": "https://www.uniprot.org/uniprotkb/Q8JI14"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.33113650",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Role of the cardiovascular system in ammonia excretion in early life stages of zebrafish (Danio rerio).",
"journal": "Am. J. Physiol. Regul. Integr. Comp. Physiol.",
"date": "2021",
"authors": "Wang Y, Pasparakis C, Grosell M",
"reference": {
"type": "PubMed",
"id": "34318705",
"url": "https://pubmed.ncbi.nlm.nih.gov/34318705"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8JI14-1",
"protein_name": "Ammonium transporter Rh type C-like 2",
"gene_name": "rhcgb; rhcgl2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8JI14",
"url": "https://www.uniprot.org/uniprotkb/Q8JI14"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.34318705",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Heme regulates exocrine peptidase precursor genes in zebrafish.",
"journal": "Exp. Biol. Med. (Maywood)",
"date": "2007",
"authors": "Wang Han, Zhou Qingchun, Kesinger Jason W, Norris Chad, Valdez Cammi",
"reference": {
"type": "PubMed",
"id": "17895525",
"url": "https://pubmed.ncbi.nlm.nih.gov/17895525"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q7ZU92-1",
"protein_name": "Poly(A)-specific ribonuclease PARN",
"gene_name": "parn",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1PHT1-1",
"protein_name": "Peptidyl-prolyl cis-trans isomerase",
"gene_name": "ppiaa",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q7ZU92",
"url": "https://www.uniprot.org/uniprotkb/Q7ZU92"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.17895525",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Bone marrow failure and developmental delay caused by mutations in poly(A)-specific ribonuclease (PARN).",
"journal": "J. Med. Genet.",
"date": "2015",
"authors": "Dhanraj Santhosh, Gunja Sethu Madhava Rao, Deveau Adam P, Nissbeck Mikael, Boonyawat Boonchai, Coombs Andrew J, Renieri Alessandra, Mucciolo Mafalda, Marozza Annabella, Buoni Sabrina, Turner Lesley, Li Hongbing, Jarrar Ameer, Sabanayagam Mathura, Kirby Melanie, Shago Mary, Pinto Dalila, Berman Jason N, Scherer Stephen W, Virtanen Anders, Dror Yigal",
"reference": {
"type": "PubMed",
"id": "26342108",
"url": "https://pubmed.ncbi.nlm.nih.gov/26342108"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q7ZU92-1",
"protein_name": "Poly(A)-specific ribonuclease PARN",
"gene_name": "parn",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q7ZU92",
"url": "https://www.uniprot.org/uniprotkb/Q7ZU92"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.26342108",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Poly (A)-specific ribonuclease deficiency impacts oogenesis in zebrafish.",
"journal": "Sci. Rep.",
"date": "2023",
"authors": "Nanjappa Dechamma Pandyanda, De Saffel Hanna, Kalladka Krithika, Arjuna Srividya, Babu Nishith, Prasad Kishan, Sips Patrick, Chakraborty Anirban",
"reference": {
"type": "PubMed",
"id": "37340076",
"url": "https://pubmed.ncbi.nlm.nih.gov/37340076"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q7ZU92-1",
"protein_name": "Poly(A)-specific ribonuclease PARN",
"gene_name": "parn",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q7ZU92",
"url": "https://www.uniprot.org/uniprotkb/Q7ZU92"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.37340076",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "STIM1 Is Required for Remodeling of the Endoplasmic Reticulum and Microtubule Cytoskeleton in Steering Growth Cones.",
"journal": "J. Neurosci.",
"date": "2019",
"authors": "Pavez M, Thompson AC, Arnott HJ, Mitchell CB, D'Atri I, Don EK, Chilton JK, Scott EK, Lin JY, Young KM, Gasperini RJ, Foa L",
"reference": {
"type": "PubMed",
"id": "31023836",
"url": "https://pubmed.ncbi.nlm.nih.gov/31023836"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2BKP3-1",
"protein_name": "Stromal interaction molecule 1a isoform X1",
"gene_name": "stim1a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2BKP3",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2BKP3"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.31023836",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Regulation of cell quiescence-proliferation balance by Ca2+-CaMKK-Akt signaling.",
"journal": "J. Cell Sci.",
"date": "2021",
"authors": "Xin Yi, Guan Jian, Li Yingxiang, Duan Cunming",
"reference": {
"type": "PubMed",
"id": "34545403",
"url": "https://pubmed.ncbi.nlm.nih.gov/34545403"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2BKP3-1",
"protein_name": "Stromal interaction molecule 1a isoform X1",
"gene_name": "stim1a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2BKP3",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2BKP3"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.34545403",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Emx3 is required for the differentiation of dorsal telencephalic neurons.",
"journal": "Dev. Dyn.",
"date": "2009",
"authors": "Viktorin Gudrun, Chiuchitu Christina, Rissler Michael, Varga Zolt\u00e1n M, Westerfield Monte",
"reference": {
"type": "PubMed",
"id": "19650145",
"url": "https://pubmed.ncbi.nlm.nih.gov/19650145"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q9W6C7-1",
"protein_name": "Neurogenic differentiation factor 6-B",
"gene_name": "neurod6b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q9W6C7",
"url": "https://www.uniprot.org/uniprotkb/Q9W6C7"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.19650145",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Neurologic and ocular phenotype in Pitt-Hopkins syndrome and a zebrafish model.",
"journal": "Hum. Genet.",
"date": "2011",
"authors": "Brockschmidt Antje, Filippi Alida, Charbel Issa Peter, Nelles Michael, Urbach Horst, Eter Nicole, Driever Wolfgang, Weber Ruthild G",
"reference": {
"type": "PubMed",
"id": "21544580",
"url": "https://pubmed.ncbi.nlm.nih.gov/21544580"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q9W6C7-1",
"protein_name": "Neurogenic differentiation factor 6-B",
"gene_name": "neurod6b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q9W6C7",
"url": "https://www.uniprot.org/uniprotkb/Q9W6C7"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.21544580",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "An epileptic encephalopathy associated GABRG2 missense mutation leads to pre- and postsynaptic defects in zebrafish.",
"journal": "Hum. Mol. Genet.",
"date": "2022",
"authors": "Zhou J, Liang W, Wang J, Chen J, Liu D, Wang X, Wu Y, Zhang Q, Shen D",
"reference": {
"type": "PubMed",
"id": "34957497",
"url": "https://pubmed.ncbi.nlm.nih.gov/34957497"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2BKD0-1",
"protein_name": "Gamma-aminobutyric acid receptor subunit beta-2a isoform X1",
"gene_name": "gabrb2a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2BKD0",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2BKD0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.34957497",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Adult zebrafish intestine resection: a novel model of short bowel syndrome, adaptation, and intestinal stem cell regeneration.",
"journal": "Am. J. Physiol. Gastrointest. Liver Physiol.",
"date": "2015",
"authors": "Schall K A, Holoyda K A, Grant C N, Levin D E, Torres E R, Maxwell A, Pollack H A, Moats R A, Frey M R, Darehzereshki A, Al Alam D, Lien C, Grikscheit T C",
"reference": {
"type": "PubMed",
"id": "26089336",
"url": "https://pubmed.ncbi.nlm.nih.gov/26089336"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2B880-1",
"protein_name": "Proheparin-binding EGF-like growth factor",
"gene_name": "hbegfb",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2B880",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2B880"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.26089336",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Tbx20 Induction Promotes Zebrafish Heart Regeneration by Inducing Cardiomyocyte Dedifferentiation and Endocardial Expansion.",
"journal": "Front. Cell Dev. Biol.",
"date": "2020",
"authors": "Fang Yabo, Lai Kaa Seng, She Peilu, Sun Jianjian, Tao Wufan, Zhong Tao P",
"reference": {
"type": "PubMed",
"id": "32850848",
"url": "https://pubmed.ncbi.nlm.nih.gov/32850848"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2B880-1",
"protein_name": "Proheparin-binding EGF-like growth factor",
"gene_name": "hbegfb",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2B880",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2B880"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.32850848",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "HB-EGF promotes progenitor cell proliferation and sensory neuron regeneration in the zebrafish olfactory epithelium.",
"journal": "FEBS J.",
"date": "2024",
"authors": "Sireci Siran, Kocag\u00f6z Yigit, Alkiraz Aysu Sevval, G\u00fcler Kardelen, Dokuzluoglu Zeynep, Balcioglu Ecem, Meydanli Sinem, Demirler Mehmet Can, Erdogan Nuray S\u00f6g\u00fcnmez, Fuss Stefan Herbert",
"reference": {
"type": "PubMed",
"id": "38088047",
"url": "https://pubmed.ncbi.nlm.nih.gov/38088047"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2B880-1",
"protein_name": "Proheparin-binding EGF-like growth factor",
"gene_name": "hbegfb",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2B880",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2B880"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.38088047",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Cloning and expression of a cDNA coding for catalase from zebrafish (Danio rerio).",
"journal": "J. Agric. Food Chem.",
"date": "2000",
"authors": "Ken C F, Lin C T, Wu J L, Shaw J F",
"reference": {
"type": "PubMed",
"id": "10888504",
"url": "https://pubmed.ncbi.nlm.nih.gov/10888504"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q9PT92-1",
"protein_name": "Catalase",
"gene_name": "cat",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q9PT92",
"url": "https://www.uniprot.org/uniprotkb/Q9PT92"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.10888504",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Molecular cloning and sequence analysis of the Danio rerio catalase gene.",
"journal": "Comp. Biochem. Physiol.",
"date": "2000",
"authors": "Gerhard G S, Kauffman E J, Grundy M A",
"reference": {
"type": "PubMed",
"id": "11281262",
"url": "https://pubmed.ncbi.nlm.nih.gov/11281262"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q9PT92-1",
"protein_name": "Catalase",
"gene_name": "cat",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q9PT92",
"url": "https://www.uniprot.org/uniprotkb/Q9PT92"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.11281262",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Oxidative stress response and gene expression with acute copper exposure in zebrafish (Danio rerio).",
"journal": "Am. J. Physiol. Regul. Integr. Comp. Physiol.",
"date": "2007",
"authors": "Craig Paul M, Wood Chris M, McClelland Grant B",
"reference": {
"type": "PubMed",
"id": "17855494",
"url": "https://pubmed.ncbi.nlm.nih.gov/17855494"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q9PT92-1",
"protein_name": "Catalase",
"gene_name": "cat",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q9PT92",
"url": "https://www.uniprot.org/uniprotkb/Q9PT92"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.17855494",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Circadian control by the reduction/oxidation pathway: catalase represses light-dependent clock gene expression in the zebrafish.",
"journal": "Proc. Natl. Acad. Sci. U.S.A.",
"date": "2007",
"authors": "Hirayama Jun, Cho Sehyung, Sassone-Corsi Paolo",
"reference": {
"type": "PubMed",
"id": "17898172",
"url": "https://pubmed.ncbi.nlm.nih.gov/17898172"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q9PT92-1",
"protein_name": "Catalase",
"gene_name": "cat",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q9PT92",
"url": "https://www.uniprot.org/uniprotkb/Q9PT92"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.17898172",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Metformin Attenuates Neutrophil Recruitment through the H3K18 Lactylation/Reactive Oxygen Species Pathway in Zebrafish.",
"journal": "Antioxidants",
"date": "2024",
"authors": "Yu Q., Zhou R., Zhang H.Y., Ren D.L., Qiu C.Z., Yin Z.J., Ding R.C.",
"reference": {
"type": "PubMed",
"id": "38397774",
"url": "https://pubmed.ncbi.nlm.nih.gov/38397774"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q9PT92-1",
"protein_name": "Catalase",
"gene_name": "cat",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q9PT92",
"url": "https://www.uniprot.org/uniprotkb/Q9PT92"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.38397774",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Impacts of diethylhexyl phthalate and overfeeding on physical fitness and lipid mobilization in Danio rerio (zebrafish).",
"journal": "Chemosphere",
"date": "2022",
"authors": "Buerger Amanda N, Parente Caitlyn E, Harris Jason P, Watts Emily G, Wormington Alexis M, Bisesi Joseph H",
"reference": {
"type": "PubMed",
"id": "35066078",
"url": "https://pubmed.ncbi.nlm.nih.gov/35066078"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2B7H0-1",
"protein_name": "Apolipoprotein Bb, tandem duplicate 1 isoform X1",
"gene_name": "apobb.1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2B7H0",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2B7H0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.35066078",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Aging Activates the Immune System and Alters the Regenerative Capacity in the Zebrafish Heart.",
"journal": "Cells",
"date": "2022",
"authors": "Reuter Hanna, Perner Birgit, Wahl Florian, Rohde Luise, Koch Philipp, Groth Marco, Buder Katrin, Englert Christoph",
"reference": {
"type": "PubMed",
"id": "35159152",
"url": "https://pubmed.ncbi.nlm.nih.gov/35159152"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2B846-1",
"protein_name": "Complement component C6 precursor",
"gene_name": "c6.1; c6.2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2B846",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2B846"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.35159152",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "The zebrafish dystrophic mutant softy maintains muscle fibre viability despite basement membrane rupture and muscle detachment.",
"journal": "Development",
"date": "2009",
"authors": "Jacoby Arie S, Busch-Nentwich Elisabeth, Bryson-Richardson Robert J, Hall Thomas E, Berger Joachim, Berger Silke, Sonntag Carmen, Sachs Caroline, Geisler Robert, Stemple Derek L, Currie Peter D",
"reference": {
"type": "PubMed",
"id": "19736328",
"url": "https://pubmed.ncbi.nlm.nih.gov/19736328"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2B8V2-1",
"protein_name": "Laminin subunit beta-2 isoform X1",
"gene_name": "lamb2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2B8V2",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2B8V2"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.19736328",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Quantification of birefringence readily measures the level of muscle damage in zebrafish.",
"journal": "Biochem. Biophys. Res. Commun.",
"date": "2012",
"authors": "Berger Joachim, Sztal Tamar, Currie Peter D",
"reference": {
"type": "PubMed",
"id": "22713473",
"url": "https://pubmed.ncbi.nlm.nih.gov/22713473"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2B8V2-1",
"protein_name": "Laminin subunit beta-2 isoform X1",
"gene_name": "lamb2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2B8V2",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2B8V2"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.22713473",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Thrombospondin-4 controls matrix assembly during development and repair of myotendinous junctions.",
"journal": "Elife",
"date": "2014",
"authors": "Subramanian Arul, Schilling Thomas F",
"reference": {
"type": "PubMed",
"id": "24941943",
"url": "https://pubmed.ncbi.nlm.nih.gov/24941943"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2B8V2-1",
"protein_name": "Laminin subunit beta-2 isoform X1",
"gene_name": "lamb2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q8JGW0-1",
"protein_name": "Thrombospondin-4-B",
"gene_name": "thbs4b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2B8V2",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2B8V2"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.24941943",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "ROS signaling-induced mitochondrial Sgk1 expression regulates epithelial cell renewal.",
"journal": "Proceedings of the National Academy of Sciences of the United States of America",
"date": "2023-06-13",
"authors": "Li Yingxiang, Liu Chengdong, Rolling Luke, Sikora Veronica, Chen Zhimin, Gurwin Jack, Barabell Caroline, Lin Jiandie, Duan Cunming",
"reference": {
"type": "PubMed",
"id": "37276417",
"url": "https://pubmed.ncbi.nlm.nih.gov/37276417"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q7ZTW4-1",
"protein_name": "Serine/threonine-protein kinase Sgk1",
"gene_name": "sgk1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q7ZTW4",
"url": "https://www.uniprot.org/uniprotkb/Q7ZTW4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.37276417",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Cyclin-dependent kinase 8 is expressed both maternally and zygotically during zebrafish embryo development.",
"journal": "Biochim. Biophys. Acta",
"date": "2002",
"authors": "Brabazon Elaine D, Bree Ronan T, Carton Micheal W, Grealy Maura, Byrnes Lucy",
"reference": {
"type": "PubMed",
"id": "12031503",
"url": "https://pubmed.ncbi.nlm.nih.gov/12031503"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8JH47-1",
"protein_name": "Cyclin-dependent kinase 8",
"gene_name": "cdk8",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8JH47",
"url": "https://www.uniprot.org/uniprotkb/Q8JH47"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.12031503",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Heme oxygenase-1 protects corexit 9500A-induced respiratory epithelial injury across species.",
"journal": "PLoS ONE",
"date": "2015",
"authors": "Li Fu Jun, Duggal Ryan N, Oliva Octavio M, Karki Suman, Surolia Ranu, Wang Zheng, Watson R Douglas, Thannickal Victor J, Powell Mickie, Watts Stephen, Kulkarni Tejaswini, Batra Hitesh, Bolisetty Subhashini, Agarwal Anupam, Antony Veena B",
"reference": {
"type": "PubMed",
"id": "25835394",
"url": "https://pubmed.ncbi.nlm.nih.gov/25835394"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2BA52-1",
"protein_name": "Pentraxin family member",
"gene_name": "crp2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2BA52",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2BA52"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.25835394",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Characterization of the innate immune response to Streptococcus pneumoniae infection in zebrafish.",
"journal": "PLoS Genet.",
"date": "2023",
"authors": "Saralahti Anni K, Harjula Sanna-Kaisa E, Rantapero Tommi, Uusi-M\u00e4kel\u00e4 Meri I E, Kaasinen Mikko, Junno Maiju, Piippo Hannaleena, Nykter Matti, Lohi Olli, Rounioja Samuli, Parikka Mataleena, R\u00e4met Mika",
"reference": {
"type": "PubMed",
"id": "36622851",
"url": "https://pubmed.ncbi.nlm.nih.gov/36622851"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2BA52-1",
"protein_name": "Pentraxin family member",
"gene_name": "crp2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2BA52",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2BA52"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.36622851",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Zebrafish ale oko, an essential determinant of sensory neuron survival and the polarity of retinal radial glia, encodes the p50 subunit of dynactin.",
"journal": "Development (Cambridge, England)",
"date": "2009-09",
"authors": "Jing Xiaotang, Malicki Jarema",
"reference": {
"type": "PubMed",
"id": "19666822",
"url": "https://pubmed.ncbi.nlm.nih.gov/19666822"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q7T3H1-1",
"protein_name": "Dynactin subunit 2",
"gene_name": "dctn2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q7T3H1",
"url": "https://www.uniprot.org/uniprotkb/Q7T3H1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.19666822",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Toxicological assessment of trace beta-diketone antibiotic mixtures on zebrafish (Danio rerio) by proteomic analysis.",
"journal": "PLoS ONE",
"date": "2014",
"authors": "Yin Xiaohan, Wang Huili, Zhang Yuna, Dahlgren Randy A, Zhang Hongqin, Shi Mengru, Gao Ming, Wang Xuedong",
"reference": {
"type": "PubMed",
"id": "25062015",
"url": "https://pubmed.ncbi.nlm.nih.gov/25062015"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2BEB4-1",
"protein_name": "Calcium-transporting ATPase",
"gene_name": "atp2b3a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2BEB4",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2BEB4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.25062015",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Functional analysis of conserved non-coding regions around the short stature hox gene (shox) in whole zebrafish embryos.",
"journal": "PLoS ONE",
"date": "2011",
"authors": "Kenyon Emma J, McEwen Gayle K, Callaway Heather, Elgar Greg",
"reference": {
"type": "PubMed",
"id": "21731768",
"url": "https://pubmed.ncbi.nlm.nih.gov/21731768"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2BFC1-1",
"protein_name": "Short stature homeobox protein isoform X1",
"gene_name": "shox",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2BFC1",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2BFC1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.21731768",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "In vivo loss of function study reveals the short stature homeobox-containing (shox) gene plays indispensable roles in early embryonic growth and bone formation in zebrafish.",
"journal": "Dev. Dyn.",
"date": "2015",
"authors": "Sawada Rie, Kamei Hiroyasu, Hakuno Fumihiko, Takahashi Shin-Ichiro, Shimizu Toshiaki",
"reference": {
"type": "PubMed",
"id": "25483930",
"url": "https://pubmed.ncbi.nlm.nih.gov/25483930"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2BFC1-1",
"protein_name": "Short stature homeobox protein isoform X1",
"gene_name": "shox",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2BFC1",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2BFC1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.25483930",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Development of the cardiac conduction system in zebrafish.",
"journal": "Gene Expr. Patterns",
"date": "2016",
"authors": "Poon Kar-Lai, Liebling Michael, Kondrychyn Igor, Brand Thomas, Korzh Vladimir",
"reference": {
"type": "PubMed",
"id": "27593944",
"url": "https://pubmed.ncbi.nlm.nih.gov/27593944"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2BFC1-1",
"protein_name": "Short stature homeobox protein isoform X1",
"gene_name": "shox",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2BFC1",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2BFC1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.27593944",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "The Short-Stature Homeobox-Containing Gene (shox/SHOX) Is Required for the Regulation of Cell Proliferation and Bone Differentiation in Zebrafish Embryo and Human Mesenchymal Stem Cells.",
"journal": "Front. Endocrinol.",
"date": "2017",
"authors": "Yokokura Tomoaki, Kamei Hiroyasu, Shibano Takashi, Yamanaka Daisuke, Sawada-Yamaguchi Rie, Hakuno Fumihiko, Takahashi Shin-Ichiro, Shimizu Toshiaki",
"reference": {
"type": "PubMed",
"id": "28642734",
"url": "https://pubmed.ncbi.nlm.nih.gov/28642734"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2BFC1-1",
"protein_name": "Short stature homeobox protein isoform X1",
"gene_name": "shox",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2BFC1",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2BFC1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.28642734",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Tjp3/zo-3 is critical for epidermal barrier function in zebrafish embryos.",
"journal": "Dev. Biol.",
"date": "2008",
"authors": "Kiener Tanja K, Selptsova-Friedrich Inna, Hunziker Walter",
"reference": {
"type": "PubMed",
"id": "18275946",
"url": "https://pubmed.ncbi.nlm.nih.gov/18275946"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2BHQ8-1",
"protein_name": "Tight junction protein ZO-3",
"gene_name": "tjp3",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2BHQ8",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2BHQ8"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.18275946",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Simultaneous assessment of glomerular filtration and barrier function in live zebrafish.",
"journal": "Am. J. Physiol. Renal Physiol.",
"date": "2014",
"authors": "Kotb Ahmed M, M\u00fcller Tobias, Xie Jing, Anand-Apte Bela, Endlich Karlhans, Endlich Nicole",
"reference": {
"type": "PubMed",
"id": "25298528",
"url": "https://pubmed.ncbi.nlm.nih.gov/25298528"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2BJ26-1",
"protein_name": "Apolipoprotein L1 isoform X1",
"gene_name": "apol1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2BJ26",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2BJ26"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.25298528",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Sequencing and De Novo Assembly of the Gonadal Transcriptome of the Endangered Chinese Sturgeon (Acipenser sinensis).",
"journal": "PLoS ONE",
"date": "2015",
"authors": "Yue Huamei, Li Chuangju, Du Hao, Zhang Shuhuan, Wei Qiwei",
"reference": {
"type": "PubMed",
"id": "26030930",
"url": "https://pubmed.ncbi.nlm.nih.gov/26030930"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2BJ26-1",
"protein_name": "Apolipoprotein L1 isoform X1",
"gene_name": "apol1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2BJ26",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2BJ26"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.26030930",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Knockdown of ApoL1 in Zebrafish Larvae Affects the Glomerular Filtration Barrier and the Expression of Nephrin.",
"journal": "PLoS ONE",
"date": "2016",
"authors": "Kotb Ahmed M, Simon Ole, Blumenthal Antje, Vogelgesang Silke, Dombrowski Frank, Amann Kerstin, Zimmermann Uwe, Endlich Karlhans, Endlich Nicole",
"reference": {
"type": "PubMed",
"id": "27138898",
"url": "https://pubmed.ncbi.nlm.nih.gov/27138898"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2BJ26-1",
"protein_name": "Apolipoprotein L1 isoform X1",
"gene_name": "apol1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2BJ26",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2BJ26"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.27138898",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Mitochondrial dynamics in mammalian health and disease.",
"journal": "Physiol. Rev.",
"date": "2009",
"authors": "Liesa Marc, Palac\u00edn Manuel, Zorzano Antonio",
"reference": {
"type": "PubMed",
"id": "19584314",
"url": "https://pubmed.ncbi.nlm.nih.gov/19584314"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2BJP0-1",
"protein_name": "Mitofusin-2",
"gene_name": "mfn2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2BJP0",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2BJP0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.19584314",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Developmental defects and neuromuscular alterations due to mitofusin 2 gene (MFN2) silencing in zebrafish: a new model for Charcot-Marie-Tooth type 2A neuropathy.",
"journal": "Neuromuscul. Disord.",
"date": "2011",
"authors": "Vettori Andrea, Bergamin Giorgia, Moro Enrico, Vazza Giovanni, Polo Giulia, Tiso Natascia, Argenton Francesco, Mostacciuolo Maria Luisa",
"reference": {
"type": "PubMed",
"id": "20951042",
"url": "https://pubmed.ncbi.nlm.nih.gov/20951042"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2BJP0-1",
"protein_name": "Mitofusin-2",
"gene_name": "mfn2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2BJP0",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2BJP0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.20951042",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Axonal Transport Defects in a Mitofusin 2 Loss of Function Model of Charcot-Marie-Tooth Disease in Zebrafish.",
"journal": "PLoS ONE",
"date": "2013",
"authors": "Chapman Anna L, Bennett Ellen J, Ramesh Tennore M, De Vos Kurt J, Grierson Andrew J",
"reference": {
"type": "PubMed",
"id": "23840650",
"url": "https://pubmed.ncbi.nlm.nih.gov/23840650"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M2BJP0-1",
"protein_name": "Mitofusin-2",
"gene_name": "mfn2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M2BJP0",
"url": "https://www.uniprot.org/uniprotkb/A0A8M2BJP0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.23840650",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Molecular basis for the inhibition of p53 by Mdmx.",
"journal": "Cell Cycle",
"date": "2007",
"authors": "Popowicz Grzegorz M, Czarna Anna, Rothweiler Ulli, Szwagierczak Aleksandra, Krajewski Marcin, Weber Lutz, Holak Tad A",
"reference": {
"type": "PubMed",
"id": "17938582",
"url": "https://pubmed.ncbi.nlm.nih.gov/17938582"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q7ZUW7-1",
"protein_name": "Protein Mdm4",
"gene_name": "mdm4",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q7ZUW7",
"url": "https://www.uniprot.org/uniprotkb/Q7ZUW7"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.17938582",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Ionizing radiation induces a dramatic persistence of p53 protein accumulation and DNA damage signaling in mutant p53 zebrafish.",
"journal": "Oncogene",
"date": "2013",
"authors": "Guo L, Liew H P, Camus S, Goh A M, Chee L L, Lunny D P, Lane E B, Lane D P",
"reference": {
"type": "PubMed",
"id": "23069659",
"url": "https://pubmed.ncbi.nlm.nih.gov/23069659"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q7ZUW7-1",
"protein_name": "Protein Mdm4",
"gene_name": "mdm4",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q7ZUW7",
"url": "https://www.uniprot.org/uniprotkb/Q7ZUW7"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.23069659",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "A missense change in the ATG4D gene links aberrant autophagy to a neurodegenerative vacuolar storage disease.",
"journal": "PLoS genetics",
"date": "2015-04",
"authors": "Ky\u00f6stil\u00e4 Kaisa, Syrj\u00e4 Pernilla, Jagannathan Vidhya, Chandrasekar Gayathri, Jokinen Tarja S, Sepp\u00e4l\u00e4 Eija H, Becker Doreen, Dr\u00f6gem\u00fcller Michaela, Dietschi Elisabeth, Dr\u00f6gem\u00fcller Cord, Lang Johann, Steffen Frank, Rohdin Cecilia, J\u00e4derlund Karin H, Lappalainen Anu K, Hahn Kerstin, Wohlsein Peter, Baumg\u00e4rtner Wolfgang, Henke Diana, Oevermann Anna, Kere Juha, Lohi Hannes, Leeb Tosso",
"reference": {
"type": "PubMed",
"id": "25875846",
"url": "https://pubmed.ncbi.nlm.nih.gov/25875846"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "R4GER2-1",
"protein_name": "Cysteine protease atg4da",
"gene_name": "atg4da",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "R4GER2",
"url": "https://www.uniprot.org/uniprotkb/R4GER2"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.25875846",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "unc-119 homolog required for normal development of the zebrafish nervous system.",
"journal": "Genesis",
"date": "2004",
"authors": "Manning Angela G, Crawford Bryan D, Waskiewicz Andrew J, Pilgrim David B",
"reference": {
"type": "PubMed",
"id": "15593328",
"url": "https://pubmed.ncbi.nlm.nih.gov/15593328"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q90Z08-1",
"protein_name": "Protein unc-119 homolog B",
"gene_name": "unc119b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q90Z08",
"url": "https://www.uniprot.org/uniprotkb/Q90Z08"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.15593328",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Knockdown of unc119c results in visual impairment and early-onset retinal dystrophy in zebrafish.",
"journal": "Biochemical and biophysical research communications",
"date": "2016-05-13",
"authors": "Rainy Nir, Etzion Talya, Alon Shahar, Pomeranz Adi, Nisgav Yael, Livnat Tami, Bach Michael, Gerstner Cecilia D, Baehr Wolfgang, Gothilf Yoav, Stiebel-Kalish Hadas",
"reference": {
"type": "PubMed",
"id": "27079236",
"url": "https://pubmed.ncbi.nlm.nih.gov/27079236"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q90Z08-1",
"protein_name": "Protein unc-119 homolog B",
"gene_name": "unc119b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q90Z08",
"url": "https://www.uniprot.org/uniprotkb/Q90Z08"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.27079236",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Indium and indium tin oxide induce endoplasmic reticulum stress and oxidative stress in zebrafish (Danio rerio).",
"journal": "Environ. Sci. Technol.",
"date": "2014",
"authors": "Brun Nadja Rebecca, Christen Verena, Furrer Gerhard, Fent Karl",
"reference": {
"type": "PubMed",
"id": "25188630",
"url": "https://pubmed.ncbi.nlm.nih.gov/25188630"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q803I8-1",
"protein_name": "E3 ubiquitin-protein ligase synoviolin",
"gene_name": "syvn1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q803I8",
"url": "https://www.uniprot.org/uniprotkb/Q803I8"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.25188630",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Molecular and functional analysis of an interferon gene from the zebrafish, Danio rerio.",
"journal": "J. Virol.",
"date": "2003",
"authors": "Altmann Stephen M, Mellon Mark T, Distel Daniel L, Kim Carol H",
"reference": {
"type": "PubMed",
"id": "12525633",
"url": "https://pubmed.ncbi.nlm.nih.gov/12525633"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8JH68-1",
"protein_name": "Interferon-induced GTP-binding protein MxA",
"gene_name": "mxa",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1PF76-1",
"protein_name": "Interferon phi 1 precursor",
"gene_name": "ifnphi1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8JH68",
"url": "https://www.uniprot.org/uniprotkb/Q8JH68"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.12525633",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Cloning and characterization of an Mx gene and its corresponding promoter from the zebrafish, Danio rerio.",
"journal": "Dev. Comp. Immunol.",
"date": "2004",
"authors": "Altmann Stephen M, Mellon Mark T, Johnson Marc C, Paw Barry H, Trede Nikolaus S, Zon Len I, Kim Carol H",
"reference": {
"type": "PubMed",
"id": "14698216",
"url": "https://pubmed.ncbi.nlm.nih.gov/14698216"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8JH68-1",
"protein_name": "Interferon-induced GTP-binding protein MxA",
"gene_name": "mxa",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8JH68",
"url": "https://www.uniprot.org/uniprotkb/Q8JH68"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.14698216",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Effects of arsenic on zebrafish innate immune system.",
"journal": "Mar. Biotechnol.",
"date": "2005",
"authors": "Hermann Andrea C, Kim Carol H",
"reference": {
"type": "PubMed",
"id": "16007375",
"url": "https://pubmed.ncbi.nlm.nih.gov/16007375"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8JH68-1",
"protein_name": "Interferon-induced GTP-binding protein MxA",
"gene_name": "mxa",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1PF76-1",
"protein_name": "Interferon phi 1 precursor",
"gene_name": "ifnphi1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8JH68",
"url": "https://www.uniprot.org/uniprotkb/Q8JH68"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.16007375",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Bmp4 in Zebrafish Enhances Antiviral Innate Immunity through p38 MAPK (Mitogen-Activated Protein Kinases) Pathway.",
"journal": "Int. J. Mol. Sci.",
"date": "2023",
"authors": "Chen Lihui, Zhong Shenjie, Wang Yajun, Wang Xinyuan, Liu Zhenhui, Hu Guobin",
"reference": {
"type": "PubMed",
"id": "37833891",
"url": "https://pubmed.ncbi.nlm.nih.gov/37833891"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8JH68-1",
"protein_name": "Interferon-induced GTP-binding protein MxA",
"gene_name": "mxa",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8JH68",
"url": "https://www.uniprot.org/uniprotkb/Q8JH68"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.37833891",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Distinct antiviral activities of IFNphi1 and IFNphi4 in zebrafish.",
"journal": "Fish Shellfish Immunol.",
"date": "2024",
"authors": "Huang W., Jia Z., Shi Y., Wang J., Xie T., Zhang Y., Tian J., Zou J., Chen K., Yan H., Yuan G.",
"reference": {
"type": "PubMed",
"id": "38244820",
"url": "https://pubmed.ncbi.nlm.nih.gov/38244820"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8JH68-1",
"protein_name": "Interferon-induced GTP-binding protein MxA",
"gene_name": "mxa",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M2BFF0-1",
"protein_name": "Cytokine receptor family member b2 isoform X1",
"gene_name": "crfb2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8JH68",
"url": "https://www.uniprot.org/uniprotkb/Q8JH68"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.38244820",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Alpha-2 adrenoceptor subtypes: are more better?",
"journal": "Br. J. Pharmacol.",
"date": "2005",
"authors": "Bylund David B",
"reference": {
"type": "PubMed",
"id": "15655520",
"url": "https://pubmed.ncbi.nlm.nih.gov/15655520"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q90WY4-1",
"protein_name": "Alpha-2A adrenergic receptor",
"gene_name": "adra2a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q90WY4",
"url": "https://www.uniprot.org/uniprotkb/Q90WY4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.15655520",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Conserved structural, pharmacological and functional properties among the three human and five zebrafish alpha 2-adrenoceptors.",
"journal": "British journal of pharmacology",
"date": "2005-01",
"authors": "Ruuskanen Jori O, Laurila Jonne, Xhaard Henri, Rantanen Ville-Veikko, Vuoriluoto Karoliina, Wurster Siegfried, Marjam\u00e4ki Anne, Vainio Minna, Johnson Mark S, Scheinin Mika",
"reference": {
"type": "PubMed",
"id": "15655522",
"url": "https://pubmed.ncbi.nlm.nih.gov/15655522"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q90WY4-1",
"protein_name": "Alpha-2A adrenergic receptor",
"gene_name": "adra2a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q8JG69-1",
"protein_name": "Alpha-2Db adrenergic receptor",
"gene_name": "adra2db",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q8JG70-1",
"protein_name": "Alpha-2Da adrenergic receptor",
"gene_name": "adra2da",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q90WY5-1",
"protein_name": "Alpha-2B adrenergic receptor",
"gene_name": "adra2b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q90WY6-1",
"protein_name": "Alpha-2C adrenergic receptor",
"gene_name": "adra2c",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q90WY4",
"url": "https://www.uniprot.org/uniprotkb/Q90WY4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.15655522",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 5
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Expression and function of alpha-adrenoceptors in zebrafish: drug effects, mRNA and receptor distributions.",
"journal": "J. Neurochem.",
"date": "2005",
"authors": "Ruuskanen Jori O, Peitsaro Nina, Kaslin Jan V M, Panula Pertti, Scheinin Mika",
"reference": {
"type": "PubMed",
"id": "16000146",
"url": "https://pubmed.ncbi.nlm.nih.gov/16000146"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q90WY4-1",
"protein_name": "Alpha-2A adrenergic receptor",
"gene_name": "adra2a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q90WY4",
"url": "https://www.uniprot.org/uniprotkb/Q90WY4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.16000146",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Fluoxetine modulates the transcription of genes involved in serotonin, dopamine and adrenergic signalling in zebrafish embryos.",
"journal": "Chemosphere",
"date": "2018",
"authors": "Cunha V, Rodrigues P, Santos M M, Moradas-Ferreira P, Ferreira M",
"reference": {
"type": "PubMed",
"id": "29145140",
"url": "https://pubmed.ncbi.nlm.nih.gov/29145140"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q90WY4-1",
"protein_name": "Alpha-2A adrenergic receptor",
"gene_name": "adra2a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q90WY4",
"url": "https://www.uniprot.org/uniprotkb/Q90WY4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.29145140",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Expression of zebrafish Lc3 synthase gene in embryonic lens requires hedgehog signaling.",
"journal": "Dev. Dyn.",
"date": "2003",
"authors": "Cao Ying, Zhao Jue, Wang Ying, Meng Anming",
"reference": {
"type": "PubMed",
"id": "14579371",
"url": "https://pubmed.ncbi.nlm.nih.gov/14579371"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q7T3S5-1",
"protein_name": "Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A",
"gene_name": "b3gnt5a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q7T3S5",
"url": "https://www.uniprot.org/uniprotkb/Q7T3S5"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.14579371",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Rubicon-Dependent Lc3 Recruitment to Salmonella-Containing Phagosomes Is a Host Defense Mechanism Triggered Independently From Major Bacterial Virulence Factors.",
"journal": "Frontiers in cellular and infection microbiology",
"date": "2019",
"authors": "Masud Samrah, van der Burg Lars, Storm Lisanne, Prajsnar Tomasz K, Meijer Annemarie H",
"reference": {
"type": "PubMed",
"id": "31428591",
"url": "https://pubmed.ncbi.nlm.nih.gov/31428591"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q7T3S5-1",
"protein_name": "Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A",
"gene_name": "b3gnt5a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q7T3S5",
"url": "https://www.uniprot.org/uniprotkb/Q7T3S5"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.31428591",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Biochemical identification and tissue-specific expression patterns of keratins in the zebrafish Danio rerio.",
"journal": "Cell Tissue Res.",
"date": "1998",
"authors": "Conrad M, Lemb K, Schubert T, Markl J",
"reference": {
"type": "PubMed",
"id": "9662643",
"url": "https://pubmed.ncbi.nlm.nih.gov/9662643"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q7ZTS4-1",
"protein_name": "Keratin, type I cytoskeletal 18",
"gene_name": "krt18",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q7ZTS4",
"url": "https://www.uniprot.org/uniprotkb/Q7ZTS4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.9662643",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "The translation initiation factor eIF3i up-regulates vascular endothelial growth factor A, accelerates cell proliferation, and promotes angiogenesis in embryonic development and tumorigenesis.",
"journal": "The Journal of biological chemistry",
"date": "2014-10-10",
"authors": "Yuan Yike, Zhang Yaguang, Yao Shaohua, Shi Huashan, Huang Xi, Li Yuhao, Wei Yuquan, Lin Shuo",
"reference": {
"type": "PubMed",
"id": "25147179",
"url": "https://pubmed.ncbi.nlm.nih.gov/25147179"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q7ZV55-1",
"protein_name": "Eukaryotic translation initiation factor 3 subunit I",
"gene_name": "eif3i",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q7ZV55",
"url": "https://www.uniprot.org/uniprotkb/Q7ZV55"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.25147179",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Abnormal development of zebrafish after knockout and knockdown of ribosomal protein L10a.",
"journal": "Scientific reports",
"date": "2019-12-02",
"authors": "Palasin Kunwadee, Uechi Tamayo, Yoshihama Maki, Srisowanna Naparee, Choijookhuu Narantsog, Hishikawa Yoshitaka, Kenmochi Naoya, Chotigeat Wilaiwan",
"reference": {
"type": "PubMed",
"id": "31792295",
"url": "https://pubmed.ncbi.nlm.nih.gov/31792295"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q7ZV96-1",
"protein_name": "Large ribosomal subunit protein uL16",
"gene_name": "rpl10",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q7ZV96",
"url": "https://www.uniprot.org/uniprotkb/Q7ZV96"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.31792295",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Differential brain expression of a new beta-actin gene from zebrafish (Danio rerio).",
"journal": "Eur. J. Neurosci.",
"date": "1999",
"authors": "Barrallo A, Gonz\u00e1lez-Sarmiento R, Garc\u00eda-Isidoro M, Cidad P, Porteros A, Rodr\u00edguez R E",
"reference": {
"type": "PubMed",
"id": "9987040",
"url": "https://pubmed.ncbi.nlm.nih.gov/9987040"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q7ZVI7-1",
"protein_name": "Actin, cytoplasmic 1",
"gene_name": "actba",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q7ZVI7",
"url": "https://www.uniprot.org/uniprotkb/Q7ZVI7"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.9987040",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Mycb and Mych stimulate M\u00fcller glial cell reprogramming and proliferation in the uninjured and injured zebrafish retina.",
"journal": "Development (Cambridge, England)",
"date": "2024-07-15",
"authors": "Lee Mi-Sun, Jui Jonathan, Sahu Aresh, Goldman Daniel",
"reference": {
"type": "PubMed",
"id": "38984586",
"url": "https://pubmed.ncbi.nlm.nih.gov/38984586"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q7ZVS9-1",
"protein_name": "Transcriptional regulator Myc-B",
"gene_name": "mycb",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q7ZVS9",
"url": "https://www.uniprot.org/uniprotkb/Q7ZVS9"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.38984586",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Evaluation of Sycp3, Plzf and Cyclin B3 expression and suitability as spermatogonia and spermatocyte markers in zebrafish.",
"journal": "Gene expression patterns : GEP",
"date": "2011",
"authors": "Ozaki Yuichi, Saito Kenji, Shinya Minori, Kawasaki Toshihiro, Sakai Noriyoshi",
"reference": {
"type": "PubMed",
"id": "21402175",
"url": "https://pubmed.ncbi.nlm.nih.gov/21402175"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q7ZW02-1",
"protein_name": "Cholinephosphotransferase 1",
"gene_name": "chpt1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q7ZW02",
"url": "https://www.uniprot.org/uniprotkb/Q7ZW02"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.21402175",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Molecular analysis and functions of p53R2 in zebrafish.",
"journal": "Gene",
"date": "2011",
"authors": "Shang Hanqiao, Li Qing, Feng Guohui, Cui Zongbin",
"reference": {
"type": "PubMed",
"id": "21194559",
"url": "https://pubmed.ncbi.nlm.nih.gov/21194559"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q7ZYW0-1",
"protein_name": "1.17.4.1; Ribonucleoside-diphosphate reductase subunit M2 B",
"gene_name": "rrm2b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q7ZYW0",
"url": "https://www.uniprot.org/uniprotkb/Q7ZYW0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.21194559",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "RNA sequencing provides insights into the toxicogenomic response of ZF4 cells to methyl methanesulfonate.",
"journal": "J. Appl. Toxicol.",
"date": "2016",
"authors": "Li Zhouquan, Long Yong, Zhong Liqiao, Song Guili, Zhang Xiaohua, Yuan Li, Cui Zongbin, Dai Heping",
"reference": {
"type": "PubMed",
"id": "26011545",
"url": "https://pubmed.ncbi.nlm.nih.gov/26011545"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q7ZYW0-1",
"protein_name": "1.17.4.1; Ribonucleoside-diphosphate reductase subunit M2 B",
"gene_name": "rrm2b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M2BKM7-1",
"protein_name": "Complexin-1",
"gene_name": "cplx1; cplx2b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q7ZYW0",
"url": "https://www.uniprot.org/uniprotkb/Q7ZYW0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.26011545",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "The single nucleotide variant at c.662A>G in human RRM2B is a loss-of-function mutation.",
"journal": "Mol. Genet. Genomic Med.",
"date": "2020",
"authors": "Tseng YT, Li SW, HuangFu WC, Yen Y, Liu IH",
"reference": {
"type": "PubMed",
"id": "32931159",
"url": "https://pubmed.ncbi.nlm.nih.gov/32931159"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q7ZYW0-1",
"protein_name": "1.17.4.1; Ribonucleoside-diphosphate reductase subunit M2 B",
"gene_name": "rrm2b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q7ZYW0",
"url": "https://www.uniprot.org/uniprotkb/Q7ZYW0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.32931159",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "FGF21 Mimics a Fasting-Induced Metabolic State and Increases Appetite in Zebrafish.",
"journal": "Sci. Rep.",
"date": "2020",
"authors": "Blanco Ayel\u00e9n Melisa, Bertucci Juan Ignacio, Unniappan Suraj",
"reference": {
"type": "PubMed",
"id": "32332781",
"url": "https://pubmed.ncbi.nlm.nih.gov/32332781"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q7ZZ04-1",
"protein_name": "Enoyl-CoA hydratase, mitochondrial",
"gene_name": "echs1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q7ZZ04",
"url": "https://www.uniprot.org/uniprotkb/Q7ZZ04"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.32332781",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Investigating the role of lipid genes in liver disease using fatty liver models of alcohol and high fat in zebrafish (Danio rerio).",
"journal": "Liver Int.",
"date": "2023",
"authors": "Seth D., Oehlers S.H., Fraser S., Cholan P.M., Shihana F.",
"reference": {
"type": "PubMed",
"id": "37650211",
"url": "https://pubmed.ncbi.nlm.nih.gov/37650211"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q7ZZ04-1",
"protein_name": "Enoyl-CoA hydratase, mitochondrial",
"gene_name": "echs1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q7ZZ04",
"url": "https://www.uniprot.org/uniprotkb/Q7ZZ04"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.37650211",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Combinatorial Wnt control of zebrafish midbrain-hindbrain boundary formation.",
"journal": "Mechanisms of development",
"date": "2004-05",
"authors": "Buckles Gerri R, Thorpe Christopher J, Ramel Marie-Christine, Lekven Arne C",
"reference": {
"type": "PubMed",
"id": "15147762",
"url": "https://pubmed.ncbi.nlm.nih.gov/15147762"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q801F7-1",
"protein_name": "Protein Wnt-10b",
"gene_name": "wnt10b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q801F7",
"url": "https://www.uniprot.org/uniprotkb/Q801F7"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.15147762",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Overlapping and distinct functions provided by fgf17, a new zebrafish member of the Fgf8/17/18 subgroup of Fgfs.",
"journal": "Mechanisms of development",
"date": "2000-12",
"authors": "Reifers F, Adams J, Mason I J, Schulte-Merker S, Brand M",
"reference": {
"type": "PubMed",
"id": "11091072",
"url": "https://pubmed.ncbi.nlm.nih.gov/11091072"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q805B2-1",
"protein_name": "Fibroblast growth factor 8b",
"gene_name": "fgf8b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q805B2",
"url": "https://www.uniprot.org/uniprotkb/Q805B2"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.11091072",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Expression of the zebrafish recognition molecule F3/F11/contactin in a subset of differentiating neurons is regulated by cofactors associated with LIM domains.",
"journal": "Mech. Dev.",
"date": "2002",
"authors": "Gimnopoulos Dimitrios, Becker Catherina G, Ostendorff Heather P, Bach Ingolf, Schachner Melitta, Becker Thomas",
"reference": {
"type": "PubMed",
"id": "14516675",
"url": "https://pubmed.ncbi.nlm.nih.gov/14516675"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8AXZ4-1",
"protein_name": "Contactin-1a",
"gene_name": "cntn1a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8AXZ4",
"url": "https://www.uniprot.org/uniprotkb/Q8AXZ4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.14516675",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Zebrafish Cx35: cloning and characterization of a gap junction gene highly expressed in the retina.",
"journal": "J. Neurosci. Res.",
"date": "2003",
"authors": "McLachlan Elizabeth, White Thomas W, Ugonabo Chioma, Olson Carl, Nagy James I, Valdimarsson Gunnar",
"reference": {
"type": "PubMed",
"id": "12949901",
"url": "https://pubmed.ncbi.nlm.nih.gov/12949901"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8JFD6-1",
"protein_name": "Gap junction protein",
"gene_name": "gjd2b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8JFD6",
"url": "https://www.uniprot.org/uniprotkb/Q8JFD6"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.12949901",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Biophysical characterization of zebrafish connexin35 hemichannels.",
"journal": "Am. J. Physiol. Cell Physiol.",
"date": "2004",
"authors": "Valiunas Virginijus, Mui Rickie, McLachlan Elizabeth, Valdimarsson Gunnar, Brink Peter R, White Thomas W",
"reference": {
"type": "PubMed",
"id": "15282192",
"url": "https://pubmed.ncbi.nlm.nih.gov/15282192"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8JFD6-1",
"protein_name": "Gap junction protein",
"gene_name": "gjd2b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8JFD6",
"url": "https://www.uniprot.org/uniprotkb/Q8JFD6"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.15282192",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Optimal tagging strategies for illuminating expression profiles of genes with different abundance in zebrafish.",
"journal": "Commun. Biol.",
"date": "2023",
"authors": "Liu J., Zhang Y., Li W., Han J., Lin F., Jin X.",
"reference": {
"type": "PubMed",
"id": "38129658",
"url": "https://pubmed.ncbi.nlm.nih.gov/38129658"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8JFD6-1",
"protein_name": "Gap junction protein",
"gene_name": "gjd2b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8JFD6",
"url": "https://www.uniprot.org/uniprotkb/Q8JFD6"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.38129658",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "The zebrafish thrombospondin 3 and 4 genes (thbs3 and thbs4): cDNA and protein structure.",
"journal": "DNA Seq.",
"date": "2002",
"authors": "Adolph Kenneth W",
"reference": {
"type": "PubMed",
"id": "12592708",
"url": "https://pubmed.ncbi.nlm.nih.gov/12592708"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8JGW0-1",
"protein_name": "Thrombospondin-4-B",
"gene_name": "thbs4b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q8JHW2-1",
"protein_name": "Thrombospondin-3a",
"gene_name": "thbs3a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8JGW0",
"url": "https://www.uniprot.org/uniprotkb/Q8JGW0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.12592708",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Alzheimer's disease-related peptide PS2V plays ancient, conserved roles in suppression of the unfolded protein response under hypoxia and stimulation of \u03b3-secretase activity.",
"journal": "Human molecular genetics",
"date": "2015-07-01",
"authors": "Moussavi Nik Seyyed Hani, Newman Morgan, Wilson Lachlan, Ebrahimie Esmaeil, Wells Simon, Musgrave Ian, Verdile Giuseppe, Martins Ralph N, Lardelli Michael",
"reference": {
"type": "PubMed",
"id": "25814654",
"url": "https://pubmed.ncbi.nlm.nih.gov/25814654"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8JHF0-1",
"protein_name": "Gamma-secretase subunit PEN-2",
"gene_name": "psenen",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB13A8S4-1",
"protein_name": "non-specific serine/threonine protein kinase",
"gene_name": "ern1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8JHF0",
"url": "https://www.uniprot.org/uniprotkb/Q8JHF0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.25814654",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "pc1 and psc1, zebrafish homologs of Drosophila Polycomb and Posterior sex combs, encode nuclear proteins capable of complex interactions.",
"journal": "Biochem. Biophys. Res. Commun.",
"date": "2002",
"authors": "Kawamura Akinori, Yokota Shin'ichiro, Yamada Kouji, Inoue Hitoshi, Inohaya Keiji, Yamazaki Ken, Yasumasu Ikuo, Higashinakagawa Toru",
"reference": {
"type": "PubMed",
"id": "12051733",
"url": "https://pubmed.ncbi.nlm.nih.gov/12051733"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8JIR0-1",
"protein_name": "Polycomb complex protein BMI-1-A",
"gene_name": "bmi1a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8N7UZW1-1",
"protein_name": "Chromobox protein homolog 2",
"gene_name": "cbx2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8JIR0",
"url": "https://www.uniprot.org/uniprotkb/Q8JIR0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.12051733",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Targeting Bmi1 for Enhancing Anoikis Sensitivity and Inhibiting Metastasis in Colorectal Cancer.",
"journal": "Cancer genomics & proteomics",
"date": "2024",
"authors": "Hsu Yin-Chou, Luo Chi-Wen, Chang Shu-Jyuan, Lai Chiao-Ying, Yang Yu-Tzu, Chen Yi-Zi, Liu Wang-Ta, Wu Chun-Chieh, Sun Cheuk-Kwan, Hou Ming-Feng, Pan Mei-Ren",
"reference": {
"type": "PubMed",
"id": "39191496",
"url": "https://pubmed.ncbi.nlm.nih.gov/39191496"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8JIR0-1",
"protein_name": "Polycomb complex protein BMI-1-A",
"gene_name": "bmi1a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8JIR0",
"url": "https://www.uniprot.org/uniprotkb/Q8JIR0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.39191496",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Identification and characterization of the zebrafish and fugu genes encoding tuberoinfundibular peptide 39.",
"journal": "Endocrinology",
"date": "2004-11",
"authors": "Papasani Madhusudhan R, Gensure Robert C, Yan Yi-Lin, Gunes Yasemin, Postlethwait John H, Ponugoti Bhaskar, John Markus R, J\u00fcppner Harald, Rubin David A",
"reference": {
"type": "PubMed",
"id": "15297442",
"url": "https://pubmed.ncbi.nlm.nih.gov/15297442"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8QGA2-1",
"protein_name": "Tuberoinfundibular peptide of 39 residues",
"gene_name": "pth2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8QGA2",
"url": "https://www.uniprot.org/uniprotkb/Q8QGA2"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.15297442",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Evolution of the vertebrate pth2 (tip39) gene family and the regulation of PTH type 2 receptor (pth2r) and its endogenous ligand pth2 by hedgehog signaling in zebrafish development.",
"journal": "J. Endocrinol.",
"date": "2011",
"authors": "Bhattacharya Poulomi, Yan Yi Lin, Postlethwait John, Rubin David A",
"reference": {
"type": "PubMed",
"id": "21880859",
"url": "https://pubmed.ncbi.nlm.nih.gov/21880859"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q8QGA2-1",
"protein_name": "Tuberoinfundibular peptide of 39 residues",
"gene_name": "pth2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q8QGA2",
"url": "https://www.uniprot.org/uniprotkb/Q8QGA2"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.21880859",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Otx1l, Otx2 and Irx1b establish and position the ZLI in the diencephalon.",
"journal": "Development (Cambridge, England)",
"date": "2007-09",
"authors": "Scholpp Steffen, Foucher Isabelle, Staudt Nicole, Peukert Daniela, Lumsden Andrew, Houart Corinne",
"reference": {
"type": "PubMed",
"id": "17670791",
"url": "https://pubmed.ncbi.nlm.nih.gov/17670791"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q90267-1",
"protein_name": "Homeobox protein OTX1 A",
"gene_name": "otx1a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q90267",
"url": "https://www.uniprot.org/uniprotkb/Q90267"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.17670791",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Different spatio-temporal expressions of three otx homeoprotein transcripts during zebrafish embryogenesis.",
"journal": "Brain Res. Mol. Brain Res.",
"date": "1994",
"authors": "Mori H, Miyazaki Y, Morita T, Nitta H, Mishina M",
"reference": {
"type": "PubMed",
"id": "7898305",
"url": "https://pubmed.ncbi.nlm.nih.gov/7898305"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q90267-1",
"protein_name": "Homeobox protein OTX1 A",
"gene_name": "otx1a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q91981-1",
"protein_name": "Homeobox protein OTX2",
"gene_name": "otx2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q91994-1",
"protein_name": "Homeobox protein OTX1 B",
"gene_name": "otx1b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q90267",
"url": "https://www.uniprot.org/uniprotkb/Q90267"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.7898305",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Expression pattern of two otx genes suggests a role in specifying anterior body structures in zebrafish.",
"journal": "Int. J. Dev. Biol.",
"date": "1995",
"authors": "Mercier P, Simeone A, Cotelli F, Boncinelli E",
"reference": {
"type": "PubMed",
"id": "8619954",
"url": "https://pubmed.ncbi.nlm.nih.gov/8619954"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q90267-1",
"protein_name": "Homeobox protein OTX1 A",
"gene_name": "otx1a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q91994-1",
"protein_name": "Homeobox protein OTX1 B",
"gene_name": "otx1b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q90267",
"url": "https://www.uniprot.org/uniprotkb/Q90267"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.8619954",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Developmental expression of the POU domain transcription factor Brn-3b (Pou4f2) in the lateral line and visual system of zebrafish.",
"journal": "Dev. Dyn.",
"date": "2004",
"authors": "DeCarvalho Ana C, Cappendijk Susanne L T, Fadool James M",
"reference": {
"type": "PubMed",
"id": "15042710",
"url": "https://pubmed.ncbi.nlm.nih.gov/15042710"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q90435-1",
"protein_name": "POU domain, class 4, transcription factor 3",
"gene_name": "pou4f3",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q90435",
"url": "https://www.uniprot.org/uniprotkb/Q90435"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.15042710",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "A GFP-based genetic screen reveals mutations that disrupt the architecture of the zebrafish retinotectal projection.",
"journal": "Development",
"date": "2005",
"authors": "Xiao Tong, Roeser Tobias, Staub Wendy, Baier Herwig",
"reference": {
"type": "PubMed",
"id": "15930106",
"url": "https://pubmed.ncbi.nlm.nih.gov/15930106"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q90435-1",
"protein_name": "POU domain, class 4, transcription factor 3",
"gene_name": "pou4f3",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q90435",
"url": "https://www.uniprot.org/uniprotkb/Q90435"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.15930106",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Zebrafish cyclin D1 is differentially expressed during early embryogenesis.",
"journal": "Biochim. Biophys. Acta",
"date": "1995",
"authors": "Yarden A, Salomon D, Geiger B",
"reference": {
"type": "PubMed",
"id": "8547308",
"url": "https://pubmed.ncbi.nlm.nih.gov/8547308"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q90459-1",
"protein_name": "G1/S-specific cyclin-D1",
"gene_name": "ccnd1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q90459",
"url": "https://www.uniprot.org/uniprotkb/Q90459"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.8547308",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Complex expression of the zp-50 pou gene in the embryonic zebrafish brain is altered by overexpression of sonic hedgehog.",
"journal": "Development (Cambridge, England)",
"date": "1996-06",
"authors": "Hauptmann G, Gerster T",
"reference": {
"type": "PubMed",
"id": "8674416",
"url": "https://pubmed.ncbi.nlm.nih.gov/8674416"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q90482-1",
"protein_name": "POU domain, class 3, transcription factor 1",
"gene_name": "pou3f1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q90482",
"url": "https://www.uniprot.org/uniprotkb/Q90482"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.8674416",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Comparison of sequence and function of the Oct-6 genes in zebrafish, chicken and mouse.",
"journal": "Mechanisms of development",
"date": "1998-06",
"authors": "Levavasseur F, Mandemakers W, Visser P, Broos L, Grosveld F, Zivkovic D, Meijer D",
"reference": {
"type": "PubMed",
"id": "9651490",
"url": "https://pubmed.ncbi.nlm.nih.gov/9651490"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q90482-1",
"protein_name": "POU domain, class 3, transcription factor 1",
"gene_name": "pou3f1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q90482",
"url": "https://www.uniprot.org/uniprotkb/Q90482"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.9651490",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "A zebrafish coxsackievirus and adenovirus receptor homologue interacts with coxsackie B virus and adenovirus.",
"journal": "J. Virol.",
"date": "2002",
"authors": "Petrella JenniElizabeth, Cohen Christopher J, Gaetz Jedidiah, Bergelson Jeffrey M",
"reference": {
"type": "PubMed",
"id": "12239327",
"url": "https://pubmed.ncbi.nlm.nih.gov/12239327"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q90Y50-1",
"protein_name": "Coxsackievirus and adenovirus receptor homolog",
"gene_name": "cxadr",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q90Y50",
"url": "https://www.uniprot.org/uniprotkb/Q90Y50"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.12239327",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "The coxsackie and adenovirus receptor (CAR) is required for renal epithelial differentiation within the zebrafish pronephros.",
"journal": "Developmental biology",
"date": "2008-01-01",
"authors": "Raschperger Elisabeth, Neve Etienne P A, Wernerson Annika, Hultenby Kjell, Pettersson Ralf F, Majumdar Arindam",
"reference": {
"type": "PubMed",
"id": "18062954",
"url": "https://pubmed.ncbi.nlm.nih.gov/18062954"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q90Y50-1",
"protein_name": "Coxsackievirus and adenovirus receptor homolog",
"gene_name": "cxadr",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q90Y50",
"url": "https://www.uniprot.org/uniprotkb/Q90Y50"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.18062954",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Characterization and expression of a presomitic mesoderm-specific mespo gene in zebrafish.",
"journal": "Dev. Genes Evol.",
"date": "2003",
"authors": "Yoo Kyeong-Won, Kim Cheol-Hee, Park Hae-Chul, Kim Seok-Hyung, Kim Hyung-Seok, Hong Sung-Kook, Han Sangtae, Rhee Myungchull, Huh Tae-Lin",
"reference": {
"type": "PubMed",
"id": "12684777",
"url": "https://pubmed.ncbi.nlm.nih.gov/12684777"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q90ZL1-1",
"protein_name": "Mesogenin-1",
"gene_name": "msgn1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q90ZL1",
"url": "https://www.uniprot.org/uniprotkb/Q90ZL1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.12684777",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "An interacting network of T-box genes directs gene expression and fate in the zebrafish mesoderm.",
"journal": "Proceedings of the National Academy of Sciences of the United States of America",
"date": "2003-08-05",
"authors": "Goering Lisa M, Hoshijima Kazuyuki, Hug Barbara, Bisgrove Brent, Kispert Andreas, Grunwald David Jonah",
"reference": {
"type": "PubMed",
"id": "12883008",
"url": "https://pubmed.ncbi.nlm.nih.gov/12883008"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q90ZL1-1",
"protein_name": "Mesogenin-1",
"gene_name": "msgn1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB13A3V1-1",
"protein_name": "Beta-2-glycoprotein 1",
"gene_name": "ntd5",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q90ZL1",
"url": "https://www.uniprot.org/uniprotkb/Q90ZL1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.12883008",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Zebrafish as a model to investigate a biallelic gain-of-function variant in MSGN1, associated with a novel skeletal dysplasia syndrome.",
"journal": "Human genomics",
"date": "2024-03-06",
"authors": "Koparir Asuman, Lekszas Caroline, Keseroglu Kemal, Rose Thalia, Rappl Lena, Rad Aboulfazl, Maroofian Reza, Narendran Nakul, Hasanzadeh Atefeh, Karimiani Ehsan Ghayoor, Boschann Felix, Kornak Uwe, Klopocki Eva, \u00d6zbudak Ertu\u011frul M, Vona Barbara, Haaf Thomas, Liedtke Daniel",
"reference": {
"type": "PubMed",
"id": "38448978",
"url": "https://pubmed.ncbi.nlm.nih.gov/38448978"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "Q90ZL1-1",
"protein_name": "Mesogenin-1",
"gene_name": "msgn1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "Q90ZL1",
"url": "https://www.uniprot.org/uniprotkb/Q90ZL1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.38448978",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
}
]