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Behav.", "date": "2008", "authors": "Samuel Marcus A, Chaal Balbir K, Lampard Greg, Green Beverley R, Ellis Brian E", "reference": { "type": "PubMed", "id": "19516975", "url": "https://pubmed.ncbi.nlm.nih.gov/19516975" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O80397-1", "protein_name": "Mitogen-activated protein kinase kinase 4", "gene_name": "MKK4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O80397", "url": "https://www.uniprot.org/uniprotkb/O80397" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19516975", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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MAPKKK3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A8R7E6-1", "protein_name": "Chitin elicitor receptor kinase 1", "gene_name": "CERK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C5H5-1", "protein_name": "Mitogen-activated protein kinase kinase kinase 5", "gene_name": "MAPKKK5", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O80397", "url": "https://www.uniprot.org/uniprotkb/O80397" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 108, "end_pos": 108, "sequence_org": "K", "sequence_mut": "R", "comment": "Loss of activity. Phosphorylated by MAPKKK5.", "evidence": [ { "database": "UniProtKB", "id": "O80397", "url": "https://www.uniprot.org/uniprotkb/O80397" }, { "database": "PubMed", "id": "27679653", "url": "https://pubmed.ncbi.nlm.nih.gov/27679653" }, { "database": "PubMed", "id": "11875555", "url": "https://pubmed.ncbi.nlm.nih.gov/11875555" }, { "database": "PubMed", "id": "11687590", "url": "https://pubmed.ncbi.nlm.nih.gov/11687590" } ], "uniprot_canonical_ac": "O80397-1" }, { "start_pos": 224, "end_pos": 224, "sequence_org": "T", "sequence_mut": "A", "comment": "Impaired phosphorylation by MAPKKK5; when associated with A-230.", "evidence": [ { "database": "UniProtKB", "id": "O80397", "url": "https://www.uniprot.org/uniprotkb/O80397" }, { "database": "PubMed", "id": "27679653", "url": "https://pubmed.ncbi.nlm.nih.gov/27679653" } ], "uniprot_canonical_ac": "O80397-1" }, { "start_pos": 230, "end_pos": 230, "sequence_org": "S", "sequence_mut": "A", "comment": "Abolishes phosphorylation by ASK7/BIN2. Impaired phosphorylation by MAPKKK5; when associated with A-224.", "evidence": [ { "database": "UniProtKB", "id": "O80397", "url": "https://www.uniprot.org/uniprotkb/O80397" }, { "database": "PubMed", "id": "11687590", "url": "https://pubmed.ncbi.nlm.nih.gov/11687590" }, { "database": "PubMed", "id": "27679653", "url": "https://pubmed.ncbi.nlm.nih.gov/27679653" }, { "database": "PubMed", "id": "11875555", "url": "https://pubmed.ncbi.nlm.nih.gov/11875555" }, { "database": "PubMed", "id": "23341468", "url": "https://pubmed.ncbi.nlm.nih.gov/23341468" } ], "uniprot_canonical_ac": "O80397-1" }, { "start_pos": 220, "end_pos": 220, "sequence_org": "T", "sequence_mut": "A", "comment": "Loss of interaction with MEKK1. Normal phosphorylation by MAPKKK5; when associated with A-226.", "evidence": [ { "database": "UniProtKB", "id": "Q9S7U9", "url": "https://www.uniprot.org/uniprotkb/Q9S7U9" }, { "database": "PubMed", "id": "15225555", "url": "https://pubmed.ncbi.nlm.nih.gov/15225555" }, { "database": "PubMed", "id": "27679653", "url": "https://pubmed.ncbi.nlm.nih.gov/27679653" }, { "database": "PubMed", "id": "11875555", "url": "https://pubmed.ncbi.nlm.nih.gov/11875555" }, { "database": "PubMed", "id": "9878570", "url": "https://pubmed.ncbi.nlm.nih.gov/9878570" } ], "uniprot_canonical_ac": "Q9S7U9-1" }, { "start_pos": 226, "end_pos": 226, "sequence_org": "T", "sequence_mut": "A", "comment": "Loss of interaction with MEKK1. Normal phosphorylation by MAPKKK5; when associated with A-220.", "evidence": [ { "database": "UniProtKB", "id": "Q9S7U9", "url": "https://www.uniprot.org/uniprotkb/Q9S7U9" }, { "database": "PubMed", "id": "15225555", "url": "https://pubmed.ncbi.nlm.nih.gov/15225555" }, { "database": "PubMed", "id": "27679653", "url": "https://pubmed.ncbi.nlm.nih.gov/27679653" }, { "database": "PubMed", "id": "11875555", "url": "https://pubmed.ncbi.nlm.nih.gov/11875555" }, { "database": "PubMed", "id": "9878570", "url": "https://pubmed.ncbi.nlm.nih.gov/9878570" } ], "uniprot_canonical_ac": "Q9S7U9-1" }, { "start_pos": 99, "end_pos": 99, "sequence_org": "K", "sequence_mut": "R", "comment": "Loss of interaction with MEKK1. Phosphorylated by MAPKKK5.", "evidence": [ { "database": "UniProtKB", "id": "Q9S7U9", "url": "https://www.uniprot.org/uniprotkb/Q9S7U9" }, { "database": "PubMed", "id": "27679653", "url": "https://pubmed.ncbi.nlm.nih.gov/27679653" }, { "database": "PubMed", "id": "9878570", "url": "https://pubmed.ncbi.nlm.nih.gov/9878570" } ], "uniprot_canonical_ac": "Q9S7U9-1" }, { "start_pos": 112, "end_pos": 112, "sequence_org": "K", "sequence_mut": "E", "comment": "No autophosphorylation activity. Directly phosphorylated by CERK1 in vitro. Impaired CERK1-mediated phosphorylation; when associated with A-244; A-245 and A-250.", "evidence": [ { "database": "UniProtKB", "id": "Q1PDV6", "url": "https://www.uniprot.org/uniprotkb/Q1PDV6" }, { "database": "PubMed", "id": "27679653", "url": "https://pubmed.ncbi.nlm.nih.gov/27679653" }, { "database": "PubMed", "id": "24750441", "url": "https://pubmed.ncbi.nlm.nih.gov/24750441" } ], "uniprot_canonical_ac": "Q1PDV6-1" }, { "start_pos": 244, "end_pos": 244, "sequence_org": "S", "sequence_mut": "A", "comment": "Impaired CERK1-mediated phosphorylation; when associated with E-112; A-245 and A-250.", "evidence": [ { "database": "UniProtKB", "id": "Q1PDV6", "url": "https://www.uniprot.org/uniprotkb/Q1PDV6" }, { "database": "PubMed", "id": "27679653", "url": "https://pubmed.ncbi.nlm.nih.gov/27679653" } ], "uniprot_canonical_ac": "Q1PDV6-1" }, { "start_pos": 245, "end_pos": 245, "sequence_org": "T", "sequence_mut": "A", "comment": "Impaired CERK1-mediated phosphorylation; when associated with E-112; A-244 and A-250.", "evidence": [ { "database": "UniProtKB", "id": "Q1PDV6", "url": "https://www.uniprot.org/uniprotkb/Q1PDV6" }, { "database": "PubMed", "id": "27679653", "url": "https://pubmed.ncbi.nlm.nih.gov/27679653" } ], "uniprot_canonical_ac": "Q1PDV6-1" }, { "start_pos": 250, "end_pos": 250, "sequence_org": "T", "sequence_mut": "A", "comment": "Impaired CERK1-mediated phosphorylation; when associated with E-112; A-244 and A-245.", "evidence": [ { "database": "UniProtKB", "id": "Q1PDV6", "url": "https://www.uniprot.org/uniprotkb/Q1PDV6" }, { "database": "PubMed", "id": "27679653", "url": "https://pubmed.ncbi.nlm.nih.gov/27679653" } ], "uniprot_canonical_ac": "Q1PDV6-1" }, { "start_pos": 215, "end_pos": 215, "sequence_org": "T", "sequence_mut": "A", "comment": "Impaired phosphorylation by MAPKKK5; when associated with A-221.", "evidence": [ { "database": "UniProtKB", "id": "Q8RXG3", "url": "https://www.uniprot.org/uniprotkb/Q8RXG3" }, { "database": "PubMed", "id": "27679653", "url": "https://pubmed.ncbi.nlm.nih.gov/27679653" } ], "uniprot_canonical_ac": "Q8RXG3-1" }, { "start_pos": 221, "end_pos": 221, "sequence_org": "S", "sequence_mut": "A", "comment": "Impaired phosphorylation by MAPKKK5; when associated with A-215.", "evidence": [ { "database": "UniProtKB", "id": "Q8RXG3", "url": "https://www.uniprot.org/uniprotkb/Q8RXG3" }, { "database": "PubMed", "id": "27679653", "url": "https://pubmed.ncbi.nlm.nih.gov/27679653" } ], "uniprot_canonical_ac": "Q8RXG3-1" }, { "start_pos": 99, "end_pos": 99, "sequence_org": "K", "sequence_mut": "R", "comment": "Loss of kinase activity. Phosphorylated by MAPKKK5 and MAPKKK20.", "evidence": [ { "database": "UniProtKB", "id": "Q8RXG3", "url": "https://www.uniprot.org/uniprotkb/Q8RXG3" }, { "database": "PubMed", "id": "11875555", "url": "https://pubmed.ncbi.nlm.nih.gov/11875555" }, { "database": "PubMed", "id": "24019147", "url": "https://pubmed.ncbi.nlm.nih.gov/24019147" }, { "database": "PubMed", "id": "27679653", "url": "https://pubmed.ncbi.nlm.nih.gov/27679653" }, { "database": "PubMed", "id": "27913741", "url": "https://pubmed.ncbi.nlm.nih.gov/27913741" }, { "database": "PubMed", "id": "11687590", "url": "https://pubmed.ncbi.nlm.nih.gov/11687590" } ], "uniprot_canonical_ac": "Q8RXG3-1" }, { "start_pos": 375, "end_pos": 375, "sequence_org": "K", "sequence_mut": "M", "comment": "Inactive. Interacts with PBL27.", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" }, { "database": "PubMed", "id": "27679653", "url": "https://pubmed.ncbi.nlm.nih.gov/27679653" } ], "uniprot_canonical_ac": "Q9C5H5-1" }, { "start_pos": 617, "end_pos": 617, "sequence_org": "S", "sequence_mut": "A", "comment": "Slight reduction of PBL27-mediated phosphorylation. Impaired PBL27-mediated phosphorylation but normal interaction with PBL27, and loss of chitin-induced MAPK activation and callose deposition; when associated with A-622; A-658; A-660; A-677 and A-685.", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" }, { "database": "PubMed", "id": "27679653", "url": "https://pubmed.ncbi.nlm.nih.gov/27679653" } ], "uniprot_canonical_ac": "Q9C5H5-1" }, { "start_pos": 622, "end_pos": 622, "sequence_org": "S", "sequence_mut": "A", "comment": "Strong reduction of PBL27-mediated phosphorylation. Impaired PBL27-mediated phosphorylation but normal interaction with PBL27, and loss of chitin-induced MAPK activation and callose deposition; when associated with A-617; A-658; A-660; A-677 and A-685.", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" }, { "database": "PubMed", "id": "27679653", "url": "https://pubmed.ncbi.nlm.nih.gov/27679653" } ], "uniprot_canonical_ac": "Q9C5H5-1" }, { "start_pos": 658, "end_pos": 658, "sequence_org": "S", "sequence_mut": "A", "comment": "Slight reduction of PBL27-mediated phosphorylation. Impaired PBL27-mediated phosphorylation but normal interaction with PBL27, and loss of chitin-induced MAPK activation and callose deposition; when associated with A-617; A-622; A-660; A-677 and A-685.", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" }, { "database": "PubMed", "id": "27679653", "url": "https://pubmed.ncbi.nlm.nih.gov/27679653" } ], "uniprot_canonical_ac": "Q9C5H5-1" }, { "start_pos": 660, "end_pos": 660, "sequence_org": "S", "sequence_mut": "A", "comment": "Slight reduction of PBL27-mediated phosphorylation. Impaired PBL27-mediated phosphorylation but normal interaction with PBL27, and loss of chitin-induced MAPK activation and callose deposition; when associated with A-617; A-622; A-658; A-677 and A-685.", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" }, { "database": "PubMed", "id": "27679653", "url": "https://pubmed.ncbi.nlm.nih.gov/27679653" } ], "uniprot_canonical_ac": "Q9C5H5-1" }, { "start_pos": 677, "end_pos": 677, "sequence_org": "T", "sequence_mut": "A", "comment": "Impaired PBL27-mediated phosphorylation but normal interaction with PBL27, and loss of chitin-induced MAPK activation and callose deposition; when associated with A-617; A-622; A-658; A-660 and A-685.", "evidence": [ { "database": "UniProtKB", "id": "Q9C5H5", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" }, { "database": "PubMed", "id": "27679653", "url": "https://pubmed.ncbi.nlm.nih.gov/27679653" } ], "uniprot_canonical_ac": "Q9C5H5-1" }, { "start_pos": 685, "end_pos": 685, "sequence_org": "S", "sequence_mut": "A", "comment": "Slight reduction of PBL27-mediated phosphorylation. 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Implications in rubber biosynthesis.", "journal": "The Journal of biological chemistry", "date": "2000-06-16", "authors": "Oh S K, Han K H, Ryu S B, Kang H", "reference": { "type": "PubMed", "id": "10764783", "url": "https://pubmed.ncbi.nlm.nih.gov/10764783" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O80458-1", "protein_name": "Dehydrodolichyl diphosphate synthase 1", "gene_name": "DPS", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O80458", "url": "https://www.uniprot.org/uniprotkb/O80458" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10764783", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 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Cloning, chloroplast localization, expression, purification, and partial characterization of spinach lumazine synthase.", "journal": "J. Biol. Chem.", "date": "1999", "authors": "Jordan D B, Bacot K O, Carlson T J, Kessel M, Viitanen P V", "reference": { "type": "PubMed", "id": "10419541", "url": "https://pubmed.ncbi.nlm.nih.gov/10419541" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O80575-1", "protein_name": "6,7-dimethyl-8-ribityllumazine synthase, chloroplastic", "gene_name": "F6E13.18", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O80575", "url": "https://www.uniprot.org/uniprotkb/O80575" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10419541", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Sternberg H, Rodr\u00edguez-Concepci\u00f3n M, Gruissem W, Yalovsky S", "reference": { "type": "PubMed", "id": "11500541", "url": "https://pubmed.ncbi.nlm.nih.gov/11500541" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O80642-1", "protein_name": "Geranylgeranyl transferase type-1 subunit beta", "gene_name": "GGB", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX33-1", "protein_name": "Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha", "gene_name": "FTA", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O80642", "url": "https://www.uniprot.org/uniprotkb/O80642" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11500541", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": 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"evidence": [ { "database": "UniProtKB", "id": "O80653", "url": "https://www.uniprot.org/uniprotkb/O80653" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19765229", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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[] } ] }, { "title": "Calcium-regulated protein kinases of plants.", "journal": "Gravit. Space Biol. Bull.", "date": "2003", "authors": "Harmon Alice C", "reference": { "type": "PubMed", "id": "12959135", "url": "https://pubmed.ncbi.nlm.nih.gov/12959135" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O80673-1", "protein_name": "CDPK-related kinase 1", "gene_name": "CRK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SG12-1", "protein_name": "CDPK-related kinase 6", "gene_name": "CRK6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIM9-1", "protein_name": "CDPK-related kinase 4", "gene_name": "CRK4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FX86-1", "protein_name": "CDPK-related kinase 8", "gene_name": "CRK8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LET1-1", "protein_name": "CDPK-related kinase 7", "gene_name": "CRK7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJL9-1", "protein_name": "CDPK-related kinase 2", "gene_name": "CRK2", "tax_name": "Mouse-ear 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evidence for the involvement of PMM in ascorbic acid biosynthesis in Arabidopsis and Nicotiana benthamiana.", "journal": "The Plant journal : for cell and molecular biology", "date": "2007-02", "authors": "Qian Weiqiang, Yu Chunmei, Qin Huanju, Liu Xin, Zhang Aimin, Johansen Ida Elisabeth, Wang Daowen", "reference": { "type": "PubMed", "id": "17217471", "url": "https://pubmed.ncbi.nlm.nih.gov/17217471" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O80840-1", "protein_name": "Phosphomannomutase", "gene_name": "PMM", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O80840", "url": "https://www.uniprot.org/uniprotkb/O80840" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17217471", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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Arabidopsis.", "journal": "Plant Cell Physiol.", "date": "2015", "authors": "Umehara Mikihisa, Cao Mengmeng, Akiyama Kohki, Akatsu Tomoki, Seto Yoshiya, Hanada Atsushi, Li Weiqiang, Takeda-Kamiya Noriko, Morimoto Yu, Yamaguchi Shinjiro", "reference": { "type": "PubMed", "id": "25713176", "url": "https://pubmed.ncbi.nlm.nih.gov/25713176" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O80875-1", "protein_name": "Protein SMAX1-LIKE 7", "gene_name": "SMXL7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LML2-1", "protein_name": "Protein SMAX1-LIKE 6", "gene_name": "SMXL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IGZ2-1", "protein_name": "Protein SMAX1-LIKE 8", "gene_name": "SMXL8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SQR3-1", "protein_name": "Strigolactone esterase D14", "gene_name": "D14", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O80875", "url": "https://www.uniprot.org/uniprotkb/O80875" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.25713176", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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[] } ] }, { "title": "SMAX1-LIKE/D53 Family Members Enable Distinct MAX2-Dependent Responses to Strigolactones and Karrikins in Arabidopsis.", "journal": "The Plant cell", "date": "2015-11", "authors": "Soundappan Ishwarya, Bennett Tom, Morffy Nicholas, Liang Yueyang, Stanga John P, Abbas Amena, Leyser Ottoline, Nelson David C", "reference": { "type": "PubMed", "id": "26546447", "url": "https://pubmed.ncbi.nlm.nih.gov/26546447" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O80875-1", "protein_name": "Protein SMAX1-LIKE 7", "gene_name": "SMXL7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHH2-1", "protein_name": "Protein SUPPRESSOR OF MAX2 1", "gene_name": "SMAX1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LML2-1", "protein_name": "Protein SMAX1-LIKE 6", "gene_name": "SMXL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IGZ2-1", "protein_name": "Protein SMAX1-LIKE 8", "gene_name": "SMXL8", 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"uniprot_canonical_ac": "O80883-1", "protein_name": "Transcription factor MYB101", "gene_name": "MYB101", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94FL7-1", "protein_name": "Transcription factor MYB120", "gene_name": "MYB120", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRM3-1", "protein_name": "Jasmonate-induced oxygenase 1", "gene_name": "JOX1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S773-1", "protein_name": "Transcription factor MYB97", "gene_name": "MYB97", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O80883", "url": "https://www.uniprot.org/uniprotkb/O80883" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.23791732", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The over-expression of two transcription factors, ABS5/bHLH30 and ABS7/MYB101, leads to upwardly curly leaves.", "journal": "PloS one", "date": "2014", "authors": "An Rui, Liu Xiayan, Wang Rui, Wu Haicui, Liang Shuang, Shao Jingxia, Qi Yafei, An Lijun, Yu Fei", "reference": { "type": "PubMed", "id": "25268707", "url": 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Biol. Chem.", "date": "1998", "authors": "Harper J F, Hong B, Hwang I, Guo H Q, Stoddard R, Huang J F, Palmgren M G, Sze H", "reference": { "type": "PubMed", "id": "9422775", "url": "https://pubmed.ncbi.nlm.nih.gov/9422775" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O81108-1", "protein_name": "Calcium-transporting ATPase 2, plasma membrane-type", "gene_name": "ACA2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O81108", "url": "https://www.uniprot.org/uniprotkb/O81108" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.9422775", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Biol. Chem.", "date": "1999", "authors": "Golovkin M, Reddy A S", "reference": { "type": "PubMed", "id": "10593939", "url": "https://pubmed.ncbi.nlm.nih.gov/10593939" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O81126-1", "protein_name": "Serine/arginine-rich splicing factor RSZ22", "gene_name": "RSZ22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81127-1", "protein_name": "Serine/arginine-rich splicing factor RSZ21", "gene_name": "RSZ21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42404-1", "protein_name": "U1 small nuclear ribonucleoprotein 70 kDa", "gene_name": "RNU1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYA5-1", "protein_name": "Serine/arginine-rich splicing factor RS2Z33", "gene_name": "RS2Z33", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SEU4-1", "protein_name": "Serine/arginine-rich SC35-like splicing factor SCL33", "gene_name": "SCL33", "tax_name": "Mouse-ear cress" }, 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[] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Co-localisation studies of Arabidopsis SR splicing factors reveal different types of speckles in plant cell nuclei.", "journal": "Exp. Cell Res.", "date": "2008", "authors": "Lorkovi\u0107 Zdravko J, Hilscher Julia, Barta Andrea", "reference": { "type": "PubMed", "id": "18674533", "url": "https://pubmed.ncbi.nlm.nih.gov/18674533" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O81126-1", "protein_name": "Serine/arginine-rich splicing factor RSZ22", "gene_name": "RSZ22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81127-1", "protein_name": "Serine/arginine-rich splicing factor RSZ21", "gene_name": "RSZ21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYA5-1", "protein_name": "Serine/arginine-rich splicing factor RS2Z33", "gene_name": "RS2Z33", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O81126", "url": "https://www.uniprot.org/uniprotkb/O81126" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana 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nuclear ribonucleoprotein particle 70K protein interacts with two novel serine/arginine-rich proteins.", "journal": "Plant Cell", "date": "1998", "authors": "Golovkin M, Reddy A S", "reference": { "type": "PubMed", "id": "9761791", "url": "https://pubmed.ncbi.nlm.nih.gov/9761791" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O81126-1", "protein_name": "Serine/arginine-rich splicing factor RSZ22", "gene_name": "RSZ22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81127-1", "protein_name": "Serine/arginine-rich splicing factor RSZ21", "gene_name": "RSZ21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42404-1", "protein_name": "U1 small nuclear ribonucleoprotein 70 kDa", "gene_name": "RNU1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O81126", "url": "https://www.uniprot.org/uniprotkb/O81126" } ], "common_name": "Mouse-ear 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"authors": "Sugimoto-Shirasu Keiko, Roberts Gethin R, Stacey Nicola J, McCann Maureen C, Maxwell Anthony, Roberts Keith", "reference": { "type": "PubMed", "id": "16339310", "url": "https://pubmed.ncbi.nlm.nih.gov/16339310" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O81242-1", "protein_name": "DNA-binding protein RHL1", "gene_name": "RHL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZ03-1", "protein_name": "DNA topoisomerase 6 subunit A", "gene_name": "TOP6A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C5V6-1", "protein_name": "DNA topoisomerase 6 subunit B", "gene_name": "TOP6B", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O81242", "url": "https://www.uniprot.org/uniprotkb/O81242" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], 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Kovacheva Sabina, Lilley Kathryn, Biehl Alexander, Leister Dario, R\u00edos Gabino, Koncz Csaba, Jarvis Paul", "reference": { "type": "PubMed", "id": "15273297", "url": "https://pubmed.ncbi.nlm.nih.gov/15273297" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O81283-1", "protein_name": "Translocase of chloroplast 159, chloroplastic", "gene_name": "TOC159", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SLF3-1", "protein_name": "Translocase of chloroplast 132, chloroplastic", "gene_name": "TOC132", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6S5G3-1", "protein_name": "Translocase of chloroplast 90, chloroplastic", "gene_name": "TOC90", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LUS2-1", "protein_name": "Translocase of chloroplast 120, chloroplastic", "gene_name": "TOC120", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": 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