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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis resistance protein SNC1 activates immune responses through association with a transcriptional corepressor.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2010-08-03", "authors": "Zhu Zhaohai, Xu Fang, Zhang Yaxi, Cheng Yu Ti, Wiermer Marcel, Li Xin, Zhang Yuelin", "reference": { "type": "PubMed", "id": "20647385", "url": "https://pubmed.ncbi.nlm.nih.gov/20647385" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O23530-2", "protein_name": "Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1", "gene_name": "SNC1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WV90-2", "protein_name": "Topless-related protein 1", "gene_name": "TPR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22446-1", "protein_name": "Histone deacetylase 19", "gene_name": "HD1; HDA19", "tax_name": "Mouse-ear cress" } ], 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Biol.", "date": "2007", "authors": "Ramon Matthew, Rolland Filip, Thevelein Johan M, Van Dijck Patrick, Leyman Barbara", "reference": { "type": "PubMed", "id": "17031512", "url": "https://pubmed.ncbi.nlm.nih.gov/17031512" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O23553-1", "protein_name": "Beta-amylase 3, chloroplastic", "gene_name": "BAM3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0MES8-1", "protein_name": "Ethylene-responsive transcription factor ABI4", "gene_name": "ABI4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O23553", "url": "https://www.uniprot.org/uniprotkb/O23553" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17031512", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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"date": "2007-09", "authors": "Bergm\u00fcller Eveline, Gehrig Peter M, Gruissem Wilhelm", "reference": { "type": "PubMed", "id": "17691833", "url": "https://pubmed.ncbi.nlm.nih.gov/17691833" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O23629-1", "protein_name": "Histone H2B.6", "gene_name": "H2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P40283-1", "protein_name": "Histone H2B.11", "gene_name": "MMN10.15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFC0-1", "protein_name": "Histone H2B.10", "gene_name": "MRN17.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQQ4-1", "protein_name": "Histone H2B.1", "gene_name": "F24B9.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZT0-1", "protein_name": "Histone H2B.7", "gene_name": "F16L2.240", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": 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[] } ] }, { "title": "Two closely related cDNAs encoding starch branching enzyme from Arabidopsis thaliana.", "journal": "Plant Mol. Biol.", "date": "1996", "authors": "Fisher D K, Gao M, Kim K N, Boyer C D, Guiltinan M J", "reference": { "type": "PubMed", "id": "8616246", "url": "https://pubmed.ncbi.nlm.nih.gov/8616246" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O23647-1", "protein_name": "1,4-alpha-glucan-branching enzyme 2-1, chloroplastic/amyloplastic", "gene_name": "SBE2.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZS3-1", "protein_name": "1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic", "gene_name": "SBE2.2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O23647", "url": "https://www.uniprot.org/uniprotkb/O23647" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.8616246", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Diverse selective modes among orthologs/paralogs of the chalcone synthase (Chs) gene family of Arabidopsis thaliana and its relative A. halleri ssp. gemmifera.", "journal": "Mol. Phylogenet. Evol.", "date": "2007", "authors": "Wang Wei-Kuang, Schaal Barbara A, Chiou You-Mei, Murakami Noriaki, Ge Xue-Jen, Huang Chi-Chun, Chiang Tzen-Yuh", "reference": { "type": "PubMed", "id": "17611127", "url": "https://pubmed.ncbi.nlm.nih.gov/17611127" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O23674-1", "protein_name": "Type III polyketide synthase A", "gene_name": "PKSA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LDM2-1", "protein_name": "Type III polyketide synthase B", "gene_name": "LAP5; PKSB", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O23674", "url": "https://www.uniprot.org/uniprotkb/O23674" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17611127", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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"url": "https://pubmed.ncbi.nlm.nih.gov/19043200" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O23674-1", "protein_name": "Type III polyketide synthase A", "gene_name": "PKSA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LDM2-1", "protein_name": "Type III polyketide synthase B", "gene_name": "LAP5; PKSB", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O23674", "url": "https://www.uniprot.org/uniprotkb/O23674" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19043200", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Leaf-specific upregulation of chloroplast translocon genes by a CCT motif-containing protein, CIA2.", "journal": "Plant Cell", "date": "2001", "authors": "Sun C W, Chen L J, Lin L C, Li H M", "reference": { "type": "PubMed", "id": "11549763", "url": "https://pubmed.ncbi.nlm.nih.gov/11549763" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O23680-1", "protein_name": "Translocase of chloroplast 33, chloroplastic", "gene_name": "TOC33", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU68-1", "protein_name": "Protein CHLOROPLAST IMPORT APPARATUS 2", "gene_name": "CIA2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STE8-1", "protein_name": "Protein TOC75-3, chloroplastic", "gene_name": "TOC75-3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O23680", "url": 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atToc159 and atToc33 are not essential for chloroplast biogenesis in guard cells and root cells.", "journal": "Plant physiology", "date": "2001-09", "authors": "Yu T S, Li H", "reference": { "type": "PubMed", "id": "11553737", "url": "https://pubmed.ncbi.nlm.nih.gov/11553737" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O23680-1", "protein_name": "Translocase of chloroplast 33, chloroplastic", "gene_name": "TOC33", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O23680", "url": "https://www.uniprot.org/uniprotkb/O23680" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11553737", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The CURLY LEAF gene controls both division and elongation of cells during the expansion of the leaf blade in Arabidopsis thaliana.", "journal": "Planta", "date": "1998-10", "authors": "Kim G T, Tsukaya H, Uchimiya H", "reference": { "type": "PubMed", "id": "9736998", "url": "https://pubmed.ncbi.nlm.nih.gov/9736998" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O23702-1", "protein_name": "C-terminal binding protein AN", "gene_name": "AN", "tax_name": "Mouse-ear cress" }, { 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure of a signal transduction regulator, RACK1, from Arabidopsis thaliana.", "journal": "Protein science : a publication of the Protein Society", "date": "2008-10", "authors": "Ullah Hemayet, Scappini Erica Louise, Moon Andrea Florence, Williams Latanya Veronica, Armstrong David Lee, Pedersen Lars Christian", "reference": { "type": "PubMed", "id": "18715992", "url": "https://pubmed.ncbi.nlm.nih.gov/18715992" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O24456-1", "protein_name": "Small ribosomal subunit protein RACK1z", "gene_name": "RACK1A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O24456", "url": "https://www.uniprot.org/uniprotkb/O24456" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18715992", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", 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{ "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis thaliana Nudix hydrolase AtNUDT7 forms complexes with the regulatory RACK1A protein and Ggamma subunits of the signal transducing heterotrimeric G protein.", "journal": "Acta Biochim. Pol.", "date": "2011", "authors": "Olejnik Kamil, Bucholc Maria, Anielska-Mazur Anna, Lipko Agata, Kujawa Martyna, Modzelan Marta, Augustyn Agnieszka, Kraszewska Elzbieta", "reference": { "type": "PubMed", "id": "22068106", "url": "https://pubmed.ncbi.nlm.nih.gov/22068106" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O24456-1", "protein_name": "Small ribosomal subunit protein RACK1z", "gene_name": "RACK1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93V47-1", "protein_name": "Guanine nucleotide-binding protein subunit gamma 2", "gene_name": "GG2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FDX9-1", "protein_name": "Guanine nucleotide-binding protein subunit gamma 1", "gene_name": "GG1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SU14-1", "protein_name": "Nudix hydrolase 7", "gene_name": "NUDT7", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O24456", "url": "https://www.uniprot.org/uniprotkb/O24456" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.22068106", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis scaffold protein RACK1A interacts with diverse environmental stress and photosynthesis related proteins.", "journal": "Plant Signal. 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"title": "Tyrosine Phosphorylation Based Homo-dimerization of Arabidopsis RACK1A Proteins Regulates Oxidative Stress Signaling Pathways in Yeast.", "journal": "Frontiers in plant science", "date": "2016", "authors": "Sabila Mercy, Kundu Nabanita, Smalls Deana, Ullah Hemayet", "reference": { "type": "PubMed", "id": "26941753", "url": "https://pubmed.ncbi.nlm.nih.gov/26941753" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O24456-1", "protein_name": "Small ribosomal subunit protein RACK1z", "gene_name": "RACK1A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O24456", "url": "https://www.uniprot.org/uniprotkb/O24456" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "phosphorylation": [ { "start_pos": 248, "end_pos": 248, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", 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a plastid sigma factor, Sig1, in Arabidopsis thaliana.", "journal": "FEBS Lett.", "date": "2002", "authors": "Morikawa Kazuya, Shiina Takashi, Murakami Shinya, Toyoshima Yoshinori", "reference": { "type": "PubMed", "id": "11943170", "url": "https://pubmed.ncbi.nlm.nih.gov/11943170" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O24629-1", "protein_name": "RNA polymerase sigma factor sigA", "gene_name": "SIGA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LDH1-1", "protein_name": "Sigma factor binding protein 1, chloroplastic", "gene_name": "SIB1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O24629", "url": "https://www.uniprot.org/uniprotkb/O24629" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11943170", "abstract": "", "glycosylation": 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G", "reference": { "type": "PubMed", "id": "11756663", "url": "https://pubmed.ncbi.nlm.nih.gov/11756663" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O48538-1", "protein_name": "Respiratory burst oxidase homolog protein F", "gene_name": "RBOHF", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIJ0-1", "protein_name": "Respiratory burst oxidase homolog protein D", "gene_name": "RBOHD", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O48538", "url": "https://www.uniprot.org/uniprotkb/O48538" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11756663", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", 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with Ca2+ binding motifs.", "journal": "Plant Cell", "date": "1998", "authors": "Keller T, Damude H G, Werner D, Doerner P, Dixon R A, Lamb C", "reference": { "type": "PubMed", "id": "9490748", "url": "https://pubmed.ncbi.nlm.nih.gov/9490748" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O48538-1", "protein_name": "Respiratory burst oxidase homolog protein F", "gene_name": "RBOHF", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SBI0-1", "protein_name": "Respiratory burst oxidase homolog protein B", "gene_name": "RBOHB", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O48538", "url": "https://www.uniprot.org/uniprotkb/O48538" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.9490748", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "MAIGO2 is involved in abscisic acid-mediated response to abiotic stresses and Golgi-to-ER retrograde transport.", "journal": "Physiol. Plantarum", "date": "2013", "authors": "Zhao Pengshan, Liu Fei, Zhang Bo, Liu Xin, Wang Bing, Gong Jiao, Yu Guanzhong, Ma Miao, Lu Yujian, Sun Jing, Wang Zhenyu, Jia Pengfei, Liu Heng", "reference": { "type": "PubMed", "id": "23025793", "url": "https://pubmed.ncbi.nlm.nih.gov/23025793" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O48626-1", "protein_name": "Centromere/kinetochore protein zw10 homolog", "gene_name": "ZW10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GXP1-1", "protein_name": "RINT1-like protein MAG2L", "gene_name": "MAG2L", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STU3-1", "protein_name": "RINT1-like protein MAG2", "gene_name": "MAG2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O48626", "url": "https://www.uniprot.org/uniprotkb/O48626" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.23025793", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of Arabidopsis photolyase enzymes and analysis of their role in protection from ultraviolet-B radiation.", "journal": "J. Exp. Bot.", "date": "2002", "authors": "Waterworth Wanda M, Jiang Qing, West Christopher E, Nikaido M, Bray Clifford M", "reference": { "type": "PubMed", "id": "11971912", "url": "https://pubmed.ncbi.nlm.nih.gov/11971912" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O48652-1", "protein_name": "(6-4)DNA photolyase", "gene_name": "UVR3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O48652", "url": "https://www.uniprot.org/uniprotkb/O48652" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11971912", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Electron nuclear double resonance differentiates complementary roles for active site histidines in (6-4) photolyase.", "journal": "The Journal of biological chemistry", "date": "2007-02-16", "authors": "Schleicher Erik, Hitomi Kenichi, Kay Christopher W M, Getzoff Elizabeth D, Todo Takeshi, Weber Stefan", "reference": { "type": "PubMed", "id": "17164245", "url": "https://pubmed.ncbi.nlm.nih.gov/17164245" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O48652-1", "protein_name": "(6-4)DNA photolyase", "gene_name": "UVR3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O48652", "url": "https://www.uniprot.org/uniprotkb/O48652" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17164245", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"database": "UniProtKB", "id": "O48652", "url": "https://www.uniprot.org/uniprotkb/O48652" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 263, "end_pos": 263, "sequence_org": "K", "sequence_mut": "R", "comment": "No effect on DNA repair activity.", "evidence": [ { "database": "UniProtKB", "id": "O48652", "url": "https://www.uniprot.org/uniprotkb/O48652" }, { "database": "PubMed", "id": "19359474", "url": "https://pubmed.ncbi.nlm.nih.gov/19359474" } ], "uniprot_canonical_ac": "O48652-1" }, { "start_pos": 276, "end_pos": 276, "sequence_org": "T", "sequence_mut": "P", "comment": "No effect on DNA repair activity.", "evidence": [ { "database": "UniProtKB", "id": "O48652", "url": "https://www.uniprot.org/uniprotkb/O48652" }, { "database": "PubMed", "id": "19359474", "url": "https://pubmed.ncbi.nlm.nih.gov/19359474" } ], "uniprot_canonical_ac": "O48652-1" }, { "start_pos": 383, 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