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Cell. Biol.", "date": "1989", "authors": "Susek R E, Lindquist S L", "reference": { "type": "PubMed", "id": "2689876", "url": "https://pubmed.ncbi.nlm.nih.gov/2689876" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P15992-1", "protein_name": "Heat shock protein 26", "gene_name": "HSP26", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P15992", "url": "https://www.uniprot.org/uniprotkb/P15992" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.2689876", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Disruption and mutagenesis of the Saccharomyces cerevisiae PDX1 gene encoding the protein X component of the pyruvate dehydrogenase complex.", "journal": "Biochemistry", "date": "1991", "authors": "Lawson J E, Behal R H, Reed L J", "reference": { "type": "PubMed", "id": "2007123", "url": "https://pubmed.ncbi.nlm.nih.gov/2007123" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16451-1", "protein_name": "Pyruvate dehydrogenase complex protein X component, mitochondrial", "gene_name": "PDX1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P16451", "url": "https://www.uniprot.org/uniprotkb/P16451" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.2007123", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 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Natl. Acad. Sci. U.S.A.", "date": "1989", "authors": "Behal R H, Browning K S, Hall T B, Reed L J", "reference": { "type": "PubMed", "id": "2682658", "url": "https://pubmed.ncbi.nlm.nih.gov/2682658" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16451-1", "protein_name": "Pyruvate dehydrogenase complex protein X component, mitochondrial", "gene_name": "PDX1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P16451", "url": "https://www.uniprot.org/uniprotkb/P16451" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.2682658", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"16873065", "url": "https://pubmed.ncbi.nlm.nih.gov/16873065" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16474-1", "protein_name": "Endoplasmic reticulum chaperone BiP", "gene_name": "KAR2", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q05787-1", "protein_name": "ERAD-associated E3 ubiquitin-protein ligase component HRD3", "gene_name": "HRD3", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q99220-1", "protein_name": "Protein OS-9 homolog", "gene_name": "YOS9", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P16474", "url": "https://www.uniprot.org/uniprotkb/P16474" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "mutagenesis": [ { "start_pos": 200, "end_pos": 200, "sequence_org": "R", "sequence_mut": "A", "comment": "Decrease of ER lumenal misfolded protein degradation. No effect on interaction with CDC48, HRD3, KAR2, UBX2, HRD1 or EMP47.", "evidence": [ { "database": "UniProtKB", "id": "Q99220", "url": "https://www.uniprot.org/uniprotkb/Q99220" }, { "database": "PubMed", "id": "16168372", "url": "https://pubmed.ncbi.nlm.nih.gov/16168372" }, { "database": "PubMed", "id": "16873065", "url": "https://pubmed.ncbi.nlm.nih.gov/16873065" }, { "database": "PubMed", "id": "16168370", "url": "https://pubmed.ncbi.nlm.nih.gov/16168370" } ], "uniprot_canonical_ac": "Q99220-1" } ], "record_id": "pubmed.16873065", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "An essential member of the HSP70 gene family of Saccharomyces cerevisiae is homologous to immunoglobulin heavy chain binding protein.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "1990", "authors": "Nicholson R C, Williams D B, Moran L A", "reference": { "type": "PubMed", "id": "2105497", "url": "https://pubmed.ncbi.nlm.nih.gov/2105497" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16474-1", "protein_name": "Endoplasmic reticulum chaperone BiP", "gene_name": "KAR2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P16474", "url": "https://www.uniprot.org/uniprotkb/P16474" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.2105497", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "KAR2, a karyogamy gene, is the yeast homolog of the mammalian BiP/GRP78 gene.", "journal": "Cell", "date": "1989", "authors": "Rose M D, Misra L M, Vogel J P", "reference": { "type": "PubMed", "id": "2661018", "url": "https://pubmed.ncbi.nlm.nih.gov/2661018" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16474-1", "protein_name": "Endoplasmic reticulum chaperone BiP", "gene_name": "KAR2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P16474", "url": "https://www.uniprot.org/uniprotkb/P16474" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.2661018", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "S. cerevisiae encodes an essential protein homologous in sequence and function to mammalian BiP.", "journal": "Cell", "date": "1989", "authors": "Normington K, Kohno K, Kozutsumi Y, Gething M J, Sambrook J", "reference": { "type": "PubMed", "id": "2661019", "url": "https://pubmed.ncbi.nlm.nih.gov/2661019" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16474-1", "protein_name": "Endoplasmic reticulum chaperone BiP", "gene_name": "KAR2", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P11484-1", "protein_name": "Ribosome-associated molecular chaperone SSB1", "gene_name": "SSB1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P16474", "url": "https://www.uniprot.org/uniprotkb/P16474" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.2661019", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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Biotechnol. Biochem.", "date": "1999", "authors": "Uritani M, Shoumura Y, Yamada S", "reference": { "type": "PubMed", "id": "10361693", "url": "https://pubmed.ncbi.nlm.nih.gov/10361693" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16521-1", "protein_name": "Elongation factor 3A", "gene_name": "YEF3", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P16521", "url": "https://www.uniprot.org/uniprotkb/P16521" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.10361693", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A sampling of the yeast proteome.", "journal": "Mol. 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Chem.", "date": "1990", "authors": "Qin S L, Xie A G, Bonato M C, McLaughlin C S", "reference": { "type": "PubMed", "id": "2404974", "url": "https://pubmed.ncbi.nlm.nih.gov/2404974" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16521-1", "protein_name": "Elongation factor 3A", "gene_name": "YEF3", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P16521", "url": "https://www.uniprot.org/uniprotkb/P16521" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.2404974", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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Mol. Biol.", "date": "2013", "authors": "Hou Wen-Tao, Li Wen-Zhe, Chen Yuxing, Jiang Yong-Liang, Zhou Cong-Zhao", "reference": { "type": "PubMed", "id": "23628156", "url": "https://pubmed.ncbi.nlm.nih.gov/23628156" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16550-1", "protein_name": "Protein APA1", "gene_name": "APA1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P22108-1", "protein_name": "Diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase 2", "gene_name": "APA2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P16550", "url": "https://www.uniprot.org/uniprotkb/P16550" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "mutagenesis": [ { "start_pos": 161, "end_pos": 161, "sequence_org": "H", "sequence_mut": "A", "comment": "Completely abolishes 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Isolation, characterization, and inactivation of the APA1 gene encoding yeast diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase.", "journal": "Journal of bacteriology", "date": "1989-12", "authors": "Plateau P, Fromant M, Schmitter J M, Buhler J M, Blanquet S", "reference": { "type": "PubMed", "id": "2556364", "url": "https://pubmed.ncbi.nlm.nih.gov/2556364" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16550-1", "protein_name": "Protein APA1", "gene_name": "APA1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P22108-1", "protein_name": "Diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase 2", "gene_name": "APA2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P16550", "url": "https://www.uniprot.org/uniprotkb/P16550" } ], "common_name": "Baker's yeast", "glygen_name": 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Synthesis of diadenosine 5',5'''-P1,P4-tetraphosphate (AppppA) from adenosine 5'-phosphosulfate and adenosine 5'-triphosphate catalyzed by yeast AppppA phosphorylase.", "journal": "Biochemistry", "date": "1988-04-19", "authors": "Guranowski A, Just G, Holler E, Jakubowski H", "reference": { "type": "PubMed", "id": "2840953", "url": "https://pubmed.ncbi.nlm.nih.gov/2840953" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16550-1", "protein_name": "Protein APA1", "gene_name": "APA1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P16550", "url": "https://www.uniprot.org/uniprotkb/P16550" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.2840953", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Phosphorolytic cleavage of diadenosine 5',5'''-P1,P4-tetraphosphate. Properties of homogeneous diadenosine 5',5'''-P1,P4-tetraphosphate alpha, beta-phosphorylase from Saccharomyces cerevisiae.", "journal": "J. Biol. 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Biochem.", "date": "1988", "authors": "Yabusaki Y, Murakami H, Ohkawa H", "reference": { "type": "PubMed", "id": "3139648", "url": "https://pubmed.ncbi.nlm.nih.gov/3139648" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16603-1", "protein_name": "NADPH--cytochrome P450 reductase", "gene_name": "NCP1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P16603", "url": "https://www.uniprot.org/uniprotkb/P16603" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.3139648", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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Biol. Chem.", "date": "1990", "authors": "Albright C F, Robbins R W", "reference": { "type": "PubMed", "id": "2182636", "url": "https://pubmed.ncbi.nlm.nih.gov/2182636" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16661-1", "protein_name": "Chitobiosyldiphosphodolichol beta-mannosyltransferase", "gene_name": "ALG1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P16661", "url": "https://www.uniprot.org/uniprotkb/P16661" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.2182636", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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Biochem.", "date": "1977", "authors": "Kopperschl\u00e4ger G, B\u00e4r J, Nissler K, Hofmann E", "reference": { "type": "PubMed", "id": "145942", "url": "https://pubmed.ncbi.nlm.nih.gov/145942" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16861-1", "protein_name": "ATP-dependent 6-phosphofructokinase subunit alpha", "gene_name": "PFK1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P16862-1", "protein_name": "ATP-dependent 6-phosphofructokinase subunit beta", "gene_name": "PFK2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P16861", "url": "https://www.uniprot.org/uniprotkb/P16861" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.145942", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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Mol. Biol.", "date": "2011", "authors": "Banaszak Katarzyna, Mechin Ingrid, Obmolova Galina, Oldham Michael, Chang Simon H, Ruiz Teresa, Radermacher Michael, Kopperschl\u00e4ger Gerhard, Rypniewski Wojciech", "reference": { "type": "PubMed", "id": "21241708", "url": "https://pubmed.ncbi.nlm.nih.gov/21241708" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16861-1", "protein_name": "ATP-dependent 6-phosphofructokinase subunit alpha", "gene_name": "PFK1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P16862-1", "protein_name": "ATP-dependent 6-phosphofructokinase subunit beta", "gene_name": "PFK2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P16861", "url": "https://www.uniprot.org/uniprotkb/P16861" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.21241708", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "An electron microscopy study of the quarternary structure of yeast phosphofructokinase.", "journal": "Biomed. Biochim. 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mutant studies of yeast phosphofructokinase.", "journal": "Biochemistry", "date": "1982-04-13", "authors": "Clifton D, Fraenkel D G", "reference": { "type": "PubMed", "id": "6211191", "url": "https://pubmed.ncbi.nlm.nih.gov/6211191" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16861-1", "protein_name": "ATP-dependent 6-phosphofructokinase subunit alpha", "gene_name": "PFK1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P16862-1", "protein_name": "ATP-dependent 6-phosphofructokinase subunit beta", "gene_name": "PFK2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P16861", "url": "https://www.uniprot.org/uniprotkb/P16861" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.6211191", "abstract": "", "glycosylation": [], "mutagenesis": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Stimulation of yeast phosphofructokinase activity by fructose 2,6-bisphosphate.", "journal": "Biochem. Biophys. Res. Commun.", "date": "1981", "authors": "Avigad G", "reference": { "type": "PubMed", "id": "6458303", "url": "https://pubmed.ncbi.nlm.nih.gov/6458303" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16861-1", "protein_name": "ATP-dependent 6-phosphofructokinase subunit alpha", "gene_name": "PFK1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P16862-1", "protein_name": "ATP-dependent 6-phosphofructokinase subunit beta", "gene_name": "PFK2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P16861", "url": "https://www.uniprot.org/uniprotkb/P16861" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.6458303", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Studies on the function of yeast phosphofructokinase subunits by in vitro mutagenesis.", "journal": "The Journal of biological chemistry", "date": "1994-03-25", "authors": "Arvanitidis A, Heinisch J J", "reference": { "type": "PubMed", "id": "8132627", "url": "https://pubmed.ncbi.nlm.nih.gov/8132627" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16861-1", "protein_name": "ATP-dependent 6-phosphofructokinase subunit alpha", "gene_name": "PFK1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P16862-1", "protein_name": "ATP-dependent 6-phosphofructokinase subunit beta", "gene_name": "PFK2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P16861", "url": "https://www.uniprot.org/uniprotkb/P16861" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "mutagenesis": [ { "start_pos": 309, "end_pos": 309, "sequence_org": "D", "sequence_mut": "T", "comment": "Reduces maximal activity of the holoenzyme by 50%. 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Sequence locations of cleavage sites created by the actions of different proteinases.", "journal": "Eur. J. 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