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Immunol.", "date": "1991", "authors": "Cruikshank W W, Greenstein J L, Theodore A C, Center D M", "reference": { "type": "PubMed", "id": "1673145", "url": "https://pubmed.ncbi.nlm.nih.gov/1673145" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01730-1", "protein_name": "T-cell surface glycoprotein CD4", "gene_name": "CD4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01730", "url": "https://www.uniprot.org/uniprotkb/P01730" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1673145", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Harrison SC", "reference": { "type": "PubMed", "id": "1701030", "url": "https://pubmed.ncbi.nlm.nih.gov/1701030" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01730-1", "protein_name": "T-cell surface glycoprotein CD4", "gene_name": "CD4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01730", "url": "https://www.uniprot.org/uniprotkb/P01730" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1701030", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Asn 362 in gp120 contributes to enhanced fusogenicity by CCR5-restricted HIV-1 envelope glycoprotein variants from patients with AIDS.", "journal": "Retrovirology", "date": "2007-12-12", "authors": "Sterjovski Jasminka, Churchill Melissa J, Ellett Anne, Gray Lachlan R, Roche Michael J, Dunfee Rebecca L, Purcell Damian F J, Saksena Nitin, Wang Bin, Sonza Secondo, Wesselingh Steven L, Karlsson Ingrid, Fenyo Eva-Maria, Gabuzda Dana, Cunningham Anthony L, Gorry Paul R", "reference": { "type": "PubMed", "id": "18076768", "url": "https://pubmed.ncbi.nlm.nih.gov/18076768" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01730-1", "protein_name": "T-cell surface glycoprotein CD4", "gene_name": "CD4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01730", "url": "https://www.uniprot.org/uniprotkb/P01730" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "automatic_literature_mining", "site_category_dict": { "automatic_literature_mining": true }, "site_seq": "N", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 362, "start_aa": "Asn", "end_pos": 362, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn362", "evidence": [ { "id": "18076768", "database": 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"table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 1 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_n_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl", "mining_tool", "filter_code", "uniprot_canonical_ac" ] } ] }, { "title": "A single amino acid substitution in a common African allele of the CD4 molecule ablates binding of the monoclonal antibody, OKT4.", "journal": "Molecular immunology", "date": "1991", "authors": "Lederman S, DeMartino JA, Daugherty BL, Foeldvari I, Yellin MJ, Cleary AM, Berkowitz N, Lowy I, Braunstein NS, Mark GE, et al.", "reference": { "type": "PubMed", "id": "1961196", "url": "https://pubmed.ncbi.nlm.nih.gov/1961196" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01730-1", "protein_name": "T-cell surface glycoprotein CD4", "gene_name": "CD4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01730", "url": "https://www.uniprot.org/uniprotkb/P01730" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1961196", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, 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Reported structure can be attached to the following: ASN-296 AND ASN-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "2001369", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2001369" }, { "id": "587", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/587" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1110100000.000000000011101000.10000.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G18188WJ", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1100100000.010000000011001000.00001.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G20779SK", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1100000000.010000000001101000.00001.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G20966IA", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1100100000.010000000001101000.00001.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G27561QX", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1110000000.010100000001111000.00001.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G30460NZ", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "ASN-296 AND ASN-325 ; ASN-296 AND ASN-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "2001369", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2001369" }, { "id": "587", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/587" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1110100000.000000000001110000.10000.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G35599NO", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1110100000.010000000001000000.10000.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G36191CD", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "ASN-296 AND ASN-325 ; ASN-296 AND ASN-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "2209609", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2209609" }, { "id": "587", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/587" }, { "id": "2001369", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2001369" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1100000000.010100000001111000.10000.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G37166HP", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1110100000.000000000001000000.10000.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G37738XF", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1100000000.000000000001100000.00001.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G38756OC", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1100000000.010100000001101000.00001.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G44276EF", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1100000000.110100100011111110.00001.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G45498YC", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1110000000.010000000011111000.00001.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G45560HM", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "ASN-296 AND ASN-325 ; ASN-296 AND ASN-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "2001369", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2001369" }, { "id": "587", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/587" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1100100000.000000000001000000.10000.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G52622SW", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1110000000.000100000001110000.00001.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G53450AF", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1100000000.010100000001111000.00001.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G53752TA", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: ASN-296 AND ASN-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "2001369", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2001369" }, { "id": "587", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/587" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1110100000.000000000011101000.10000.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G53962WT", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1100100000.000000000001000000.10000.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G57413FT", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1100100000.010000000001100000.00001.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G64132UH", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1110100000.000000000011101000.00001.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G65890UA", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1100100000.000000000001001000.10000.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G77252PU", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "ASN-296 AND ASN-325 ; ASN-296 AND ASN-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "2001369", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2001369" }, { "id": "587", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/587" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1100100000.010000000001101000.10000.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G78059CC", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "2209609", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2209609" }, { "id": "587", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/587" }, { "id": "2001369", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2001369" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1110000000.010100000001111000.10000.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G87633UQ", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1110000000.010100000001111000.00001.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G89878AA", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1110000000.000000000001000000.00001.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true, "automatic_literature_mining": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 296, "start_aa": "Asn", "end_pos": 296, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn296", "evidence": [ { "id": "P01730", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P01730#ptm_processing" }, { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "19159218", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/19159218" }, { "id": "2001369", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2001369" }, { "id": "28196510", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/28196510" }, { "id": "GLY_000481", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000481" } ], "mining_tool": "GlycoSiteMiner_1.0", "mining_tool_list": [ { "label": "GlycoSiteMiner_1.0" } ], "filter_code": "001000000000000000000.00010000000000.00.01001", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G03860PZ", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 325, "start_aa": "Asn", "end_pos": 325, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn325", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1100000000.010100000001111000.00001.01000", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G05950HG", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 325, "start_aa": "Asn", "end_pos": 325, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn325", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1110100000.000000000011111000.00001.01000", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G07995VK", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 325, "start_aa": "Asn", "end_pos": 325, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn325", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "2001369", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2001369" }, { "id": "587", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/587" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1100100000.010000000001000000.10000.01000", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G17689DH", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 325, "start_aa": "Asn", "end_pos": 325, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn325", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "2001369", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2001369" }, { "id": "587", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/587" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1110100000.000000000011101000.10000.01000", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G18188WJ", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 325, "start_aa": "Asn", "end_pos": 325, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn325", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1100100000.010000000011001000.00001.01000", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G20779SK", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 325, "start_aa": "Asn", "end_pos": 325, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn325", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1100000000.010000000001101000.00001.01000", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G20966IA", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 325, "start_aa": "Asn", "end_pos": 325, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn325", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1100100000.010000000001101000.00001.01000", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G27561QX", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 325, "start_aa": "Asn", "end_pos": 325, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn325", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1110000000.010100000001111000.00001.01000", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G30460NZ", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 325, "start_aa": "Asn", "end_pos": 325, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn325", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "2001369", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2001369" }, { "id": "587", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/587" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1110100000.000000000001110000.10000.01000", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G35599NO", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 325, "start_aa": "Asn", "end_pos": 325, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn325", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "2001369", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2001369" }, { "id": "587", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/587" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1110100000.010000000001000000.10000.01000", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G36191CD", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 325, "start_aa": "Asn", "end_pos": 325, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn325", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "2209609", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2209609" }, { "id": "587", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/587" }, { "id": "2001369", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2001369" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1100000000.010100000001111000.10000.01000", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G37166HP", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 325, "start_aa": "Asn", "end_pos": 325, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn325", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "2001369", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2001369" }, { "id": "587", "database": "GlyConnect", "url": "https://glyconnect.expasy.org/browser/proteins/587" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1110100000.000000000001000000.10000.01000", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G37738XF", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 325, "start_aa": "Asn", "end_pos": 325, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn325", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1100000000.000000000001100000.00001.01000", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G38756OC", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: N-296, N-325", "icn3d_view": {}, "start_pos": 325, "start_aa": "Asn", "end_pos": 325, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn325", "evidence": [ { "id": "2592374", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/2592374" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1100000000.010100000001101000.00001.01000", "uniprot_canonical_ac": "P01730-1" }, { "glytoucan_ac": "G44276EF", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. 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Lett.", "date": "1994", "authors": "Winkel K, Sotzik F, Vremec D, Cameron P U, Shortman K", "reference": { "type": "PubMed", "id": "8088877", "url": "https://pubmed.ncbi.nlm.nih.gov/8088877" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01730-1", "protein_name": "T-cell surface glycoprotein CD4", "gene_name": "CD4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01730", "url": "https://www.uniprot.org/uniprotkb/P01730" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8088877", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Crystal structure of the human receptor activity-modifying protein 1 extracellular domain.", "journal": "Protein Sci.", "date": "2008", "authors": "Kusano Seisuke, Kukimoto-Niino Mutsuko, Akasaka Ryogo, Toyama Mitsutoshi, Terada Takaho, Shirouzu Mikako, Shindo Takayuki, Yokoyama Shigeyuki", "reference": { "type": "PubMed", "id": "18725456", "url": "https://pubmed.ncbi.nlm.nih.gov/18725456" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O60894-1", "protein_name": "Receptor 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Clin. Invest.", "date": "1999", "authors": "Furukawa H, Murata S, Yabe T, Shimbara N, Keicho N, Kashiwase K, Watanabe K, Ishikawa Y, Akaza T, Tadokoro K, Tohma S, Inoue T, Tokunaga K, Yamamoto K, Tanaka K, Juji T", "reference": { "type": "PubMed", "id": "10074494", "url": "https://pubmed.ncbi.nlm.nih.gov/10074494" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03518-1", "protein_name": "Antigen peptide transporter 1", "gene_name": "TAP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q03518", "url": "https://www.uniprot.org/uniprotkb/Q03518" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10074494", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 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McKeever PM, Schneider R, McCorkindale MD, Manzoni C, Rademakers R, Graff-Radford NR, Dickson DW, Parisi JE, Boeve BF, Petersen RC, Miller BL, Seeley WW, van Swieten JC, van Rooij J, Pijnenburg Y, van der Zee J, Van Broeckhoven C, Le Ber I, Van Deerlin V, Suh E, Rohrer JD, Mead S, Graff C, Oijerstedt L, Pickering-Brown S, Rollinson S, Rossi G, Tagliavini F, Brooks WS, Dobson-Stone C, Halliday GM, Hodges JR, Piguet O, Binetti G, Benussi L, Ghidoni R, Nacmias B, Sorbi S, Bruni AC, Galimberti D, Scarpini E, Rainero I, Rubino E, Clarimon J, Lleo A, Ruiz A, Hernandez I, Pastor P, Diez-Fairen M, Borroni B, Pasquier F, Deramecourt V, Lebouvier T, Perneczky R, Diehl-Schmid J, Grafman J, Huey ED, Mayeux R, Nalls MA, Hernandez D, Singleton A, Momeni P, Zeng Z, Hardy J, Robertson J, Zinman L, Rogaeva E", "reference": { "type": "PubMed", "id": "30252044", "url": "https://pubmed.ncbi.nlm.nih.gov/30252044" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5SRN2-1", "protein_name": "Testis-expressed basic protein 1", "gene_name": "TSBP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q5SRN2", "url": "https://www.uniprot.org/uniprotkb/Q5SRN2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.30252044", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Multilocus evaluation of genetic predictors of multiple sclerosis.", "journal": "Gene", "date": "2022", "authors": "Timasheva Y, Nasibullin TR, Tuktarova IA, Erdman VV, Galiullin TR, Zaplakhova OV, Bakhtiiarova KZ", "reference": { "type": "PubMed", "id": "34656742", "url": "https://pubmed.ncbi.nlm.nih.gov/34656742" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5SRN2-1", "protein_name": "Testis-expressed basic protein 1", "gene_name": "TSBP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q5SRN2", "url": "https://www.uniprot.org/uniprotkb/Q5SRN2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.34656742", "abstract": "", "glycosylation": [], "mutagenesis": [], 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