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Immunol.", "date": "1990", "authors": "Takahashi S, Doss C, Levy S, Levy R", "reference": { "type": "PubMed", "id": "2398277", "url": "https://pubmed.ncbi.nlm.nih.gov/2398277" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P13164-1", "protein_name": "Interferon-induced transmembrane protein 1", "gene_name": "IFITM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60033-1", "protein_name": "CD81 antigen", "gene_name": "CD81", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P13164", "url": "https://www.uniprot.org/uniprotkb/P13164" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2398277", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A single DNA response element can confer inducibility by both alpha- and gamma-interferons.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "1989", "authors": "Reid LE, Brasnett AH, Gilbert CS, Porter AC, Gewert DR, Stark GR, Kerr IM", "reference": { "type": "PubMed", "id": "2492664", "url": "https://pubmed.ncbi.nlm.nih.gov/2492664" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P13164-1", "protein_name": "Interferon-induced transmembrane protein 1", "gene_name": "IFITM1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P13164", "url": "https://www.uniprot.org/uniprotkb/P13164" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2492664", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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{ "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A membrane topology model for human interferon inducible transmembrane protein 1.", "journal": "PLoS ONE", "date": "2014", "authors": "Weston Stuart, Czieso Stephanie, White Ian J, Smith Sarah E, Kellam Paul, Marsh Mark", "reference": { "type": "PubMed", "id": "25105503", "url": "https://pubmed.ncbi.nlm.nih.gov/25105503" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P13164-1", "protein_name": "Interferon-induced transmembrane protein 1", "gene_name": "IFITM1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P13164", "url": "https://www.uniprot.org/uniprotkb/P13164" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25105503", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 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Only localizes at the lysosome.", "evidence": [ { "database": "UniProtKB", "id": "P13164", "url": "https://www.uniprot.org/uniprotkb/P13164" }, { "database": "PubMed", "id": "26354436", "url": "https://pubmed.ncbi.nlm.nih.gov/26354436" } ], "uniprot_canonical_ac": "P13164-1" }, { "start_pos": 84, "end_pos": 84, "sequence_org": "C", "sequence_mut": "A", "comment": "Loss of anti-HCV activity. Only localizes at the lysosome.", "evidence": [ { "database": "UniProtKB", "id": "P13164", "url": "https://www.uniprot.org/uniprotkb/P13164" }, { "database": "PubMed", "id": "26354436", "url": "https://pubmed.ncbi.nlm.nih.gov/26354436" } ], "uniprot_canonical_ac": "P13164-1" }, { "start_pos": 104, "end_pos": 104, "sequence_org": "C", "sequence_mut": "A", "comment": "Loss of anti-HCV activity. 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No effect on anti-SARS-CoV-2 activity.", "evidence": [ { "database": "UniProtKB", "id": "Q9CQW9", "url": "https://www.uniprot.org/uniprotkb/Q9CQW9" }, { "database": "PubMed", "id": "33270927", "url": "https://pubmed.ncbi.nlm.nih.gov/33270927" } ], "uniprot_canonical_ac": "Q9CQW9-1" }, { "start_pos": 71, "end_pos": 72, "sequence_org": "CC", "sequence_mut": "AA", "comment": "No effect on SARS-CoV-2 infection; when associated with A-105.", "evidence": [ { "database": "UniProtKB", "id": "Q9CQW9", "url": "https://www.uniprot.org/uniprotkb/Q9CQW9" }, { "database": "PubMed", "id": "33270927", "url": "https://pubmed.ncbi.nlm.nih.gov/33270927" } ], "uniprot_canonical_ac": "Q9CQW9-1" }, { "start_pos": 105, "end_pos": 105, "sequence_org": "C", "sequence_mut": "A", "comment": "Loss of anti-HCV activity. Only localizes at the lysosome. No effect on SARS-CoV-2 infection; when associated with 71-A-A-72. Loss of anti-influenza A virus activity; when associated with 71-A-A-72.", "evidence": [ { "database": "UniProtKB", "id": "Q01628", "url": "https://www.uniprot.org/uniprotkb/Q01628" }, { "database": "PubMed", "id": "26354436", "url": "https://pubmed.ncbi.nlm.nih.gov/26354436" }, { "database": "PubMed", "id": "33270927", "url": "https://pubmed.ncbi.nlm.nih.gov/33270927" } ], "uniprot_canonical_ac": "Q01628-1" }, { "start_pos": 20, "end_pos": 20, "sequence_org": "Y", "sequence_mut": "A", "comment": "Loss of phosphorylation. Accumulates at the plasma membrane. Increases anti-HCV properties. Loss of anti-SARS-CoV-2 activity by enhancing Spike-mediated cell-to-cell fusion.", "evidence": [ { "database": "UniProtKB", "id": "Q01628", "url": "https://www.uniprot.org/uniprotkb/Q01628" }, { "database": "PubMed", "id": "26354436", "url": "https://pubmed.ncbi.nlm.nih.gov/26354436" }, { "database": "PubMed", "id": "33270927", "url": "https://pubmed.ncbi.nlm.nih.gov/33270927" } ], "uniprot_canonical_ac": "Q01628-1" }, { "start_pos": 23, "end_pos": 23, "sequence_org": "L", "sequence_mut": "Q", "comment": "Accumulates at the plasma membrane. Loss of anti-SARS-CoV-2 activity by enhancing Spike-mediated cell-to-cell fusion.", "evidence": [ { "database": "UniProtKB", "id": "Q01628", "url": "https://www.uniprot.org/uniprotkb/Q01628" }, { "database": "PubMed", "id": "33270927", "url": "https://pubmed.ncbi.nlm.nih.gov/33270927" } ], "uniprot_canonical_ac": "Q01628-1" }, { "start_pos": 59, "end_pos": 68, "sequence_org": "VWSLFNTLFM", "sequence_mut": "", "comment": "Slightly enhances infection by SARS-CoV-2.", "evidence": [ { "database": "UniProtKB", "id": "Q01628", "url": "https://www.uniprot.org/uniprotkb/Q01628" }, { "database": "PubMed", "id": "33270927", "url": "https://pubmed.ncbi.nlm.nih.gov/33270927" } ], "uniprot_canonical_ac": "Q01628-1" }, { "start_pos": 61, "end_pos": 65, "sequence_org": "SLFNT", "sequence_mut": "ALFAA", "comment": "Decreases anti-SARS-CoV-2 activity.", "evidence": [ { "database": "UniProtKB", "id": "Q01628", "url": "https://www.uniprot.org/uniprotkb/Q01628" }, { "database": "PubMed", "id": "33270927", "url": "https://pubmed.ncbi.nlm.nih.gov/33270927" } ], "uniprot_canonical_ac": "Q01628-1" }, { "start_pos": 71, "end_pos": 72, "sequence_org": "CC", "sequence_mut": "AA", "comment": "Loss of anti-HCV activity. Only localizes at the lysosome. No effect on SARS-CoV-2 infection; when associated with A-105. Loss of anti-influenza A virus activity; when associated with A-105.", "evidence": [ { "database": "UniProtKB", "id": "Q01628", "url": "https://www.uniprot.org/uniprotkb/Q01628" }, { "database": "PubMed", "id": "26354436", "url": "https://pubmed.ncbi.nlm.nih.gov/26354436" }, { "database": "PubMed", "id": "33270927", "url": "https://pubmed.ncbi.nlm.nih.gov/33270927" } ], "uniprot_canonical_ac": "Q01628-1" } ], "record_id": "pubmed.33270927", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Syncytia formation by SARS-CoV-2-infected cells.", "journal": "EMBO J.", "date": "2021", "authors": "Buchrieser Julian, Dufloo J\u00e9r\u00e9my, Hubert Mathieu, Monel Blandine, Planas Delphine, Rajah Maaran Michael, Planchais Cyril, Porrot Fran\u00e7oise, Guivel-Benhassine Florence, Van der Werf Sylvie, Casartelli Nicoletta, Mouquet Hugo, Bruel Timoth\u00e9e, Schwartz Olivier", "reference": { "type": "PubMed", "id": "33522642", "url": "https://pubmed.ncbi.nlm.nih.gov/33522642" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P13164-1", "protein_name": "Interferon-induced transmembrane protein 1", "gene_name": "IFITM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15393-1", "protein_name": "Transmembrane protease serine 2", "gene_name": "TMPRSS2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P13164", "url": "https://www.uniprot.org/uniprotkb/P13164" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.33522642", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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Genet.", "date": "2012", "authors": "Olbrich Heike, Schmidts Miriam, Werner Claudius, Onoufriadis Alexandros, Loges Niki T, Raidt Johanna, Banki Nora Fanni, Shoemark Amelia, Burgoyne Tom, Al Turki Saeed, Hurles Matthew E, , K\u00f6hler Gabriele, Schroeder Josef, N\u00fcrnberg Gudrun, N\u00fcrnberg Peter, Chung Eddie M K, Reinhardt Richard, Marthin June K, Nielsen Kim G, Mitchison Hannah M, Omran Heymut", "reference": { "type": "PubMed", "id": "23022101", "url": "https://pubmed.ncbi.nlm.nih.gov/23022101" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q4G0P3-1", "protein_name": "Axonemal central pair apparatus protein HYDIN", "gene_name": "HYDIN", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q4G0P3", "url": "https://www.uniprot.org/uniprotkb/Q4G0P3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": 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"Cindric S, Dougherty GW, Olbrich H, Hjeij R, Loges NT, Amirav I, Philipsen MC, Marthin JK, Nielsen KG, Sutharsan S, Raidt J, Werner C, Pennekamp P, Dworniczak B, Omran H", "reference": { "type": "PubMed", "id": "31545650", "url": "https://pubmed.ncbi.nlm.nih.gov/31545650" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q4G0P3-1", "protein_name": "Axonemal central pair apparatus protein HYDIN", "gene_name": "HYDIN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C093-1", "protein_name": "Sperm flagella and cilia-associated protein 2", "gene_name": "SPEF2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q4G0P3", "url": "https://www.uniprot.org/uniprotkb/Q4G0P3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.31545650", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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Biophys. Res. Commun.", "date": "1999", "authors": "Matsui E, Kaneko H, Fukao T, Teramoto T, Inoue R, Watanabe M, Kasahara K, Kondo N", "reference": { "type": "PubMed", "id": "10600539", "url": "https://pubmed.ncbi.nlm.nih.gov/10600539" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q99665-1", "protein_name": "Interleukin-12 receptor subunit beta-2", "gene_name": "IL12RB2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q99665", "url": "https://www.uniprot.org/uniprotkb/Q99665" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10600539", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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