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Commun.", "date": "2007", "authors": "Ohno Tomoya, Onishi Yoshiaki, Ishida Norio", "reference": { "type": "PubMed", "id": "17274955", "url": "https://pubmed.ncbi.nlm.nih.gov/17274955" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O08750-1", "protein_name": "Nuclear factor interleukin-3-regulated protein", "gene_name": "Nfil3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O54943-1", "protein_name": "Period circadian protein homolog 2", "gene_name": "Per2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9R194-1", "protein_name": "Cryptochrome-2", "gene_name": "Cry2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O08750", "url": "https://www.uniprot.org/uniprotkb/O08750" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.17274955", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of an endogenous ligand that activates pregnane X receptor-mediated sterol clearance.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2003", "authors": "Dussault Isabelle, Yoo Hye-Dong, Lin Min, Wang Eric, Fan Ming, Batta Ashok K, Salen Gerald, Erickson Sandra K, Forman Barry M", "reference": { "type": "PubMed", "id": "12569201", "url": "https://pubmed.ncbi.nlm.nih.gov/12569201" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O54915-1", "protein_name": "Nuclear receptor subfamily 1 group I member 2", "gene_name": "Nr1i2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O54915", "url": "https://www.uniprot.org/uniprotkb/O54915" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.12569201", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular mechanism of nuclear translocation of an orphan nuclear receptor, SXR.", "journal": "Mol. 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Nutr.", "date": "2009", "authors": "Li Yilan, Ross-Viola Jennifer S, Shay Neil F, Moore David D, Ricketts Marie-Louise", "reference": { "type": "PubMed", "id": "19297428", "url": "https://pubmed.ncbi.nlm.nih.gov/19297428" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O54915-1", "protein_name": "Nuclear receptor subfamily 1 group I member 2", "gene_name": "Nr1i2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O75469-1", "protein_name": "Nuclear receptor subfamily 1 group I member 2", "gene_name": "NR1I2", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O54915", "url": "https://www.uniprot.org/uniprotkb/O54915" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.19297428", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Circadian repressors CRY1 and CRY2 broadly interact with nuclear receptors and modulate transcriptional activity.", "journal": "Proc. 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U.S.A.", "date": "2017", "authors": "Kriebs A, Jordan SD, Soto E, Henriksson E, Sandate CR, Vaughan ME, Chan AB, Duglan D, Papp SJ, Huber AL, Afetian ME, Yu RT, Zhao X, Downes M, Evans RM, Lamia KA", "reference": { "type": "PubMed", "id": "28751364", "url": "https://pubmed.ncbi.nlm.nih.gov/28751364" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O54915-1", "protein_name": "Nuclear receptor subfamily 1 group I member 2", "gene_name": "Nr1i2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P97784-1", "protein_name": "Cryptochrome-1", "gene_name": "Cry1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P35396-1", "protein_name": "Peroxisome proliferator-activated receptor delta", "gene_name": "Ppard", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P19091-1", "protein_name": "Androgen receptor", "gene_name": "Ar", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O35627-1", "protein_name": "Nuclear receptor subfamily 1 group I member 3", "gene_name": "Nr1i3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P06537-1", "protein_name": "Glucocorticoid receptor", "gene_name": "Nr3c1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9R194-1", "protein_name": "Cryptochrome-2", "gene_name": "Cry2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P48281-1", "protein_name": "Vitamin D3 receptor", "gene_name": "Vdr", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P49698-1", "protein_name": "Hepatocyte nuclear factor 4-alpha", "gene_name": "Hnf4a", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O54915", "url": "https://www.uniprot.org/uniprotkb/O54915" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 351, "end_pos": 351, "sequence_org": "G", "sequence_mut": "D", "comment": "Loss of ability to inhibit CLOCK-BMAL1-mediated transcriptional activity. 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U.S.A.", "date": "1998", "authors": "Gross GA, Imamura T, Luedke C, Vogt SK, Olson LM, Nelson DM, Sadovsky Y, Muglia LJ", "reference": { "type": "PubMed", "id": "9751758", "url": "https://pubmed.ncbi.nlm.nih.gov/9751758" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35454-1", "protein_name": "Oxytocin-neurophysin 1", "gene_name": "Oxt", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P22437-1", "protein_name": "Prostaglandin G/H synthase 1", "gene_name": "Ptgs1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P35454", "url": "https://www.uniprot.org/uniprotkb/P35454" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.9751758", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Localization of the Norrie disease gene mRNA by in situ hybridization.", "journal": "Brain Res. 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Cell. Biol.", "date": "1996", "authors": "McCormick MB, Tamimi RM, Snider L, Asakura A, Bergstrom D, Tapscott SJ", "reference": { "type": "PubMed", "id": "8816493", "url": "https://pubmed.ncbi.nlm.nih.gov/8816493" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P70660-1", "protein_name": "Neurogenin-1", "gene_name": "Neurog1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q62414-1", "protein_name": "Neurogenic differentiation factor 2", "gene_name": "Neurod2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q92886-1", "protein_name": "Neurogenin-1", "gene_name": "NEUROG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15784-1", "protein_name": "Neurogenic differentiation factor 2", "gene_name": "NEUROD2", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P70660", "url": "https://www.uniprot.org/uniprotkb/P70660" } ], "common_name": "Mouse", "glygen_name": "Mouse", 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{ "type": "PubMed", "id": "8858147", "url": "https://pubmed.ncbi.nlm.nih.gov/8858147" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P70660-1", "protein_name": "Neurogenin-1", "gene_name": "Neurog1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P70595-1", "protein_name": "Neurogenin-1", "gene_name": "Neurog1", "tax_name": "Rat" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P70660", "url": "https://www.uniprot.org/uniprotkb/P70660" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.8858147", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PHAX, a mediator of U snRNA nuclear export whose activity is regulated by phosphorylation.", "journal": "Cell", "date": "2000", "authors": "Ohno M, Segref A, Bachi A, Wilm M, Mattaj IW", "reference": { "type": "PubMed", "id": "10786834", "url": "https://pubmed.ncbi.nlm.nih.gov/10786834" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3UYV9-1", "protein_name": "Nuclear cap-binding protein subunit 1", "gene_name": "Ncbp1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CQ49-1", "protein_name": "Nuclear cap-binding protein subunit 2", "gene_name": "Ncbp2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6P5F9-1", "protein_name": "Exportin-1", "gene_name": "Xpo1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JJT9-1", "protein_name": "Phosphorylated adapter RNA export protein", "gene_name": "Phax", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q3UYV9", "url": "https://www.uniprot.org/uniprotkb/Q3UYV9" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 124, "end_pos": 129, "sequence_org": "LGILGM", "sequence_mut": "AGIAGA", "comment": "Reduces U snRNA export. Strongly abolishes the U snRNA export complex formation. Does not abolish the pre-complex formation.", "evidence": [ { "database": "UniProtKB", "id": "Q9JJT9", "url": "https://www.uniprot.org/uniprotkb/Q9JJT9" }, { "database": "PubMed", "id": "10786834", "url": "https://pubmed.ncbi.nlm.nih.gov/10786834" } ], "uniprot_canonical_ac": "Q9JJT9-1" } ], "record_id": "pubmed.10786834", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The evolutionarily conserved region of the U snRNA export mediator PHAX is a novel RNA-binding domain that is essential for U snRNA export.", "journal": "RNA", "date": "2001", "authors": "Segref A, Mattaj IW, Ohno M", "reference": { "type": "PubMed", "id": "11333016", "url": "https://pubmed.ncbi.nlm.nih.gov/11333016" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3UYV9-1", "protein_name": "Nuclear cap-binding protein subunit 1", "gene_name": "Ncbp1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BQA1-1", "protein_name": "Methylosome protein WDR77", "gene_name": "WDR77", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8CG34-1", "protein_name": "Nuclear envelope pore membrane protein POM 121C", "gene_name": "POM121C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35658-1", "protein_name": "Nuclear pore complex protein Nup214", "gene_name": "NUP214", "tax_name": 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"gene_name": "GEMIN7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRG9-1", "protein_name": "Aladin", "gene_name": "AAAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P37198-1", "protein_name": "Nuclear pore glycoprotein p62", "gene_name": "NUP62", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q3UYV9", "url": "https://www.uniprot.org/uniprotkb/Q3UYV9" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 190, "end_pos": 191, "sequence_org": "RK", "sequence_mut": "AA", "comment": "Strongly reduces its import in the nucleus. 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Abolishes its import in the nucleus, does not change its export to the cytoplasm and the export of U snRNA complex; when associated with 190-AA-191.", "evidence": [ { "database": "UniProtKB", "id": "Q9JJT9", "url": "https://www.uniprot.org/uniprotkb/Q9JJT9" }, { "database": "PubMed", "id": "11333016", "url": "https://pubmed.ncbi.nlm.nih.gov/11333016" } ], "uniprot_canonical_ac": "Q9JJT9-1" } ], "record_id": "pubmed.11333016", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 52 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ars2 links the nuclear cap-binding complex to RNA interference and cell proliferation.", "journal": "Cell", "date": "2009", "authors": "Gruber JJ, Zatechka DS, Sabin LR, Yong J, Lum JJ, Kong M, Zong WX, Zhang Z, Lau CK, Rawlings J, Cherry S, Ihle JN, Dreyfuss G, Thompson CB", "reference": { "type": "PubMed", "id": "19632182", "url": "https://pubmed.ncbi.nlm.nih.gov/19632182" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3UYV9-1", "protein_name": "Nuclear cap-binding protein subunit 1", "gene_name": "Ncbp1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CQ49-1", "protein_name": "Nuclear cap-binding protein subunit 2", "gene_name": "Ncbp2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q5HZJ0-1", "protein_name": "Ribonuclease 3", "gene_name": "Drosha", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P52298-1", "protein_name": "Nuclear cap-binding protein subunit 2", "gene_name": "NCBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99MR6-1", "protein_name": "Serrate RNA effector molecule homolog", "gene_name": "Srrt", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BXP5-1", "protein_name": "Serrate RNA effector molecule homolog", "gene_name": "SRRT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09161-1", "protein_name": "Nuclear cap-binding protein subunit 1", "gene_name": "NCBP1", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q3UYV9", "url": "https://www.uniprot.org/uniprotkb/Q3UYV9" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.19632182", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Feedback regulation of transcriptional termination by the mammalian circadian clock PERIOD complex.", "journal": "Science", "date": "2012", "authors": "Padmanabhan K, Robles MS, Westerling T, Weitz CJ", "reference": { "type": "PubMed", "id": "22767893", "url": "https://pubmed.ncbi.nlm.nih.gov/22767893" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "High Norepinephrine State Induces Growth of Colorectal Cancer Cells via ADP-Ribosyltransferase 1 in Type 2 Diabetes Mellitus.", "journal": "Frontiers in bioscience (Landmark edition)", "date": "2023-11-23", "authors": "Chen Wenwen, Xie Hailun, Xiao Ming, Li Ming, Tang Yi, Zhang Shuxian, Li Xiujun, Wang Yalan", "reference": { "type": "PubMed", "id": "38062812", "url": "https://pubmed.ncbi.nlm.nih.gov/38062812" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q60935-1", "protein_name": "GPI-linked NAD(P)(+)--arginine ADP-ribosyltransferase 1", "gene_name": "Art1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q60935", "url": "https://www.uniprot.org/uniprotkb/Q60935" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.38062812", 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Role for Nrf1 in gamma-gcs(l) and gss expression in mouse fibroblasts.", "journal": "The Journal of biological chemistry", "date": "1999-12-24", "authors": "Kwong M, Kan Y W, Chan J Y", "reference": { "type": "PubMed", "id": "10601325", "url": "https://pubmed.ncbi.nlm.nih.gov/10601325" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q61985-1", "protein_name": "Endoplasmic reticulum membrane sensor NFE2L1", "gene_name": "Nfe2l1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q61985", "url": "https://www.uniprot.org/uniprotkb/Q61985" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.10601325", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } 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J.", "date": "2010", "authors": "Zhang Yiguo, Hayes John D", "reference": { "type": "PubMed", "id": "20629635", "url": "https://pubmed.ncbi.nlm.nih.gov/20629635" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q61985-1", "protein_name": "Endoplasmic reticulum membrane sensor NFE2L1", "gene_name": "Nfe2l1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q61985", "url": "https://www.uniprot.org/uniprotkb/Q61985" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.20629635", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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"The Fbw7 tumor suppressor regulates nuclear factor E2-related factor 1 transcription factor turnover through proteasome-mediated proteolysis.", "journal": "The Journal of biological chemistry", "date": "2011", "authors": "Biswas M, Phan D, Watanabe M, Chan JY", "reference": { "type": "PubMed", "id": "21953459", "url": "https://pubmed.ncbi.nlm.nih.gov/21953459" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q61985-1", "protein_name": "Endoplasmic reticulum membrane sensor NFE2L1", "gene_name": "Nfe2l1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VBV4-2", "protein_name": "F-box/WD repeat-containing protein 7", "gene_name": "Fbxw7", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q61985", "url": "https://www.uniprot.org/uniprotkb/Q61985" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 350, "end_pos": 354, "sequence_org": "SPEVE", "sequence_mut": "", "comment": "Abolishes interaction with FBXW7.", "evidence": [ { "database": "UniProtKB", "id": "Q61985", "url": "https://www.uniprot.org/uniprotkb/Q61985" }, { "database": "PubMed", "id": "21953459", "url": "https://pubmed.ncbi.nlm.nih.gov/21953459" } ], "uniprot_canonical_ac": "Q61985-1" } ], "record_id": "pubmed.21953459", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "NF-E2-related factor 1 (Nrf1) serves as a novel regulator of hepatic lipid metabolism through regulation of the Lipin1 and PGC-1\u03b2 genes.", "journal": "Molecular and cellular biology", "date": "2012-07", "authors": "Hirotsu Yosuke, Hataya Nami, Katsuoka Fumiki, Yamamoto Masayuki", "reference": { "type": "PubMed", "id": "22586274", "url": "https://pubmed.ncbi.nlm.nih.gov/22586274" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q61985-1", "protein_name": "Endoplasmic reticulum membrane sensor NFE2L1", "gene_name": "Nfe2l1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q61985", "url": "https://www.uniprot.org/uniprotkb/Q61985" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], 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"total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of Nrf1b, a novel isoform of the nuclear factor-erythroid-2 related transcription factor-1 that activates antioxidant response element-regulated genes.", "journal": "PloS one", "date": "2012", "authors": "Kwong Eric K, Kim Kyung-Mi, Penalosa Patrick J, Chan Jefferson Y", "reference": { "type": "PubMed", "id": "23144760", "url": "https://pubmed.ncbi.nlm.nih.gov/23144760" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q61985-1", "protein_name": "Endoplasmic reticulum membrane sensor NFE2L1", "gene_name": "Nfe2l1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q61985", "url": "https://www.uniprot.org/uniprotkb/Q61985" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.23144760", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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