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B", "date": "2019", "authors": "Hassinen Minna, Korajoki Hanna, Abramochkin Denis, Krivosheya Pavel, Vornanen Matti", "reference": { "type": "PubMed", "id": "31679058", "url": "https://pubmed.ncbi.nlm.nih.gov/31679058" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0AC58HF78-1", "protein_name": "G protein-activated inward rectifier potassium channel 3", "gene_name": "kcnj14", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0AC58HF78", "url": "https://www.uniprot.org/uniprotkb/A0AC58HF78" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.31679058", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Commun.", "date": "2015", "authors": "Staudt Nicole, M\u00fcller-Sienerth Nicole, Fane-Dremucheva Alla, Yusaf Shahnaz P, Millrine David, Wright Gavin J", "reference": { "type": "PubMed", "id": "25490391", "url": "https://pubmed.ncbi.nlm.nih.gov/25490391" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0AC58HFH1-1", "protein_name": "Brevican core protein", "gene_name": "bcan", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QM89-1", "protein_name": "CD276 antigen isoform X1; CD276 antigen precursor", "gene_name": "cd276", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0AC58HFH1", "url": "https://www.uniprot.org/uniprotkb/A0AC58HFH1" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.25490391", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "An evolutionarily conserved long noncoding RNA TUNA controls pluripotency and neural lineage commitment.", "journal": "Mol. 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J.", "date": "2004", "authors": "Vasta Gerardo R, Ahmed Hafiz, Du Shao- J, Henrikson Davin", "reference": { "type": "PubMed", "id": "15750792", "url": "https://pubmed.ncbi.nlm.nih.gov/15750792" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0AC58HM56-1", "protein_name": "Galectin", "gene_name": "lgals3b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QGM0-1", "protein_name": "Galectin", "gene_name": "lgals1l1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F8W2U6-1", "protein_name": "Galectin", "gene_name": "lgals2b", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0AC58HM56", "url": "https://www.uniprot.org/uniprotkb/A0AC58HM56" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.15750792", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular targets of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) within the zebrafish ovary: insights into TCDD-induced endocrine disruption and reproductive toxicity.", "journal": "Reprod. Toxicol.", "date": "2008", "authors": "Heiden Tisha C King, Struble Craig A, Rise Matthew L, Hessner Martin J, Hutz Reinhold J, Carvan Michael J", "reference": { "type": "PubMed", "id": "17884332", "url": "https://pubmed.ncbi.nlm.nih.gov/17884332" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0AC58HM56-1", "protein_name": "Galectin", "gene_name": "lgals3b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AB13A7B8-1", "protein_name": "Pro-epidermal growth factor", "gene_name": "egf", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0AC58HM56", "url": "https://www.uniprot.org/uniprotkb/A0AC58HM56" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.17884332", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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Faug\u00e8re Val\u00e9rie, Baudoin Corinne, Moclyn Melody, Touraine Renaud, Lina-Granade Genevi\u00e8ve, Coss\u00e9e Mireille, Bergougnoux Anne, Kalatzis Vasiliki, Rossel Mireille, Roux Anne-Fran\u00e7oise", "reference": { "type": "PubMed", "id": "37173411", "url": "https://pubmed.ncbi.nlm.nih.gov/37173411" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0AC58HTI7-1", "protein_name": "Homer protein homolog 2 isoform X1", "gene_name": "homer2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9NSB8-1", "protein_name": "Homer protein homolog 2", "gene_name": "HOMER2", "tax_name": "Human" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0AC58HTI7", "url": "https://www.uniprot.org/uniprotkb/A0AC58HTI7" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.37173411", "abstract": "", "glycosylation": [], "mutagenesis": 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Dyn.", "date": "2006", "authors": "Bollig Frank, Mehringer Rebecca, Perner Birgit, Hartung Christina, Sch\u00e4fer Matthias, Schartl Manfred, Volff Jean-Nicolas, Winkler Christoph, Englert Christoph", "reference": { "type": "PubMed", "id": "16292775", "url": "https://pubmed.ncbi.nlm.nih.gov/16292775" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0AC58HU68-1", "protein_name": "WT1 transcription factor b isoform X1", "gene_name": "wt1b", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "A0AC58HU68", "url": "https://www.uniprot.org/uniprotkb/A0AC58HU68" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.16292775", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Wilms tumor genes wt1a and wt1b control different steps during formation of the zebrafish pronephros.", "journal": "Dev. 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"PHACTR1 Is a Genetic Susceptibility Locus for Fibromuscular Dysplasia Supporting Its Complex Genetic Pattern of Inheritance.", "journal": "PLoS Genet.", "date": "2016", "authors": "Kiando Soto Romuald, Tucker Nathan R, Castro-Vega Luis-Jaime, Katz Alexander, D'Escamard Valentina, Tr\u00e9ard Cyrielle, Fraher Daniel, Albuisson Juliette, Kadian-Dodov Daniella, Ye Zi, Austin Erin, Yang Min-Lee, Hunker Kristina, Barlassina Cristina, Cusi Daniele, Galan Pilar, Empana Jean-Philippe, Jouven Xavier, Gimenez-Roqueplo Anne-Paule, Bruneval Patrick, Hyun Kim Esther Soo, Olin Jeffrey W, Gornik Heather L, Azizi Michel, Plouin Pierre-Fran\u00e7ois, Ellinor Patrick T, Kullo Iftikhar J, Milan David J, Ganesh Santhi K, Boutouyrie Pierre, Kovacic Jason C, Jeunemaitre Xavier, Bouatia-Naji Nabila", "reference": { "type": "PubMed", "id": "27792790", "url": "https://pubmed.ncbi.nlm.nih.gov/27792790" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0AC58I1V4-1", 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Biol.", "date": "2006", "authors": "Sasaki Takayo, Ramanathan Sunita, Okuno Yukiko, Kumagai Chiharu, Shaikh Seemab S, Gilbert David M", "reference": { "type": "PubMed", "id": "16428457", "url": "https://pubmed.ncbi.nlm.nih.gov/16428457" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A9J7CH09-1", "protein_name": "Dihydrofolate reductase", "gene_name": "Dhfr", "tax_name": "Chinese hamster" } ], "species": [ { "name": "Cricetulus griseus", "taxid": 10029, "evidence": [ { "database": "UniProtKB", "id": "A0A9J7CH09", "url": "https://www.uniprot.org/uniprotkb/A0A9J7CH09" } ], "common_name": "Chinese hamster", "glygen_name": "Hamster", "reference_species": "Cricetulus griseus [10029]" } ], "record_id": "pubmed.16428457", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Correction of point mutations at the endogenous locus of the dihydrofolate reductase gene using repair-PolyPurine Reverse Hoogsteen hairpins in mammalian cells.", "journal": "Biochem. Pharmacol.", "date": "2016", "authors": "Sol\u00e9 Anna, Ciudad Carlos J, Chasin Lawrence A, No\u00e9 V\u00e9ronique", "reference": { "type": "PubMed", "id": "27063945", "url": "https://pubmed.ncbi.nlm.nih.gov/27063945" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A9J7CH09-1", "protein_name": "Dihydrofolate reductase", "gene_name": "Dhfr", "tax_name": "Chinese hamster" } ], "species": [ { "name": "Cricetulus griseus", "taxid": 10029, "evidence": [ { "database": "UniProtKB", "id": "A0A9J7CH09", "url": "https://www.uniprot.org/uniprotkb/A0A9J7CH09" } ], "common_name": "Chinese hamster", "glygen_name": "Hamster", "reference_species": "Cricetulus griseus [10029]" } ], "record_id": "pubmed.27063945", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Multiple transcription start sites, DNase I-hypersensitive sites, and an opposite-strand exon in the 5' region of the CHO dhfr gene.", "journal": "Mol. Cell. Biol.", "date": "1986", "authors": "Mitchell P J, Carothers A M, Han J H, Harding J D, Kas E, Venolia L, Chasin L A", "reference": { "type": "PubMed", "id": "3023846", "url": "https://pubmed.ncbi.nlm.nih.gov/3023846" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A9J7CH09-1", "protein_name": "Dihydrofolate reductase", "gene_name": "Dhfr", "tax_name": "Chinese hamster" } ], "species": [ { "name": "Cricetulus griseus", "taxid": 10029, "evidence": [ { "database": "UniProtKB", "id": "A0A9J7CH09", "url": "https://www.uniprot.org/uniprotkb/A0A9J7CH09" } ], "common_name": "Chinese hamster", "glygen_name": "Hamster", "reference_species": "Cricetulus griseus [10029]" } ], "record_id": "pubmed.3023846", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Spontaneous splicing mutations at the dihydrofolate reductase locus in Chinese hamster ovary cells.", "journal": "Mol. Cell. 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Differential phenotypes of active site and human autosomal dominant progressive external ophthalmoplegia mutations in Drosophila mitochondrial DNA helicase expressed in Schneider cells.", "journal": "The Journal of biological chemistry", "date": "2007", "authors": "Matsushima Y, Kaguni LS", "reference": { "type": "PubMed", "id": "17272269", "url": "https://pubmed.ncbi.nlm.nih.gov/17272269" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9VL76-1", "protein_name": "Mitochondrial DNA helicase", "gene_name": "mtDNA-helicase", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q9VL76", "url": "https://www.uniprot.org/uniprotkb/Q9VL76" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "mutagenesis": [ { "start_pos": 326, "end_pos": 326, "sequence_org": "A", "sequence_mut": "T", "comment": "No effect on mitochondrial transcription.", "evidence": [ { "database": "UniProtKB", "id": "Q9VL76", "url": "https://www.uniprot.org/uniprotkb/Q9VL76" }, { "database": "PubMed", "id": "17272269", "url": "https://pubmed.ncbi.nlm.nih.gov/17272269" } ], "uniprot_canonical_ac": "Q9VL76-1" }, { "start_pos": 334, "end_pos": 334, "sequence_org": "I", "sequence_mut": "T", "comment": "Loss of mitochondrial transcription.", "evidence": [ { "database": "UniProtKB", "id": "Q9VL76", "url": "https://www.uniprot.org/uniprotkb/Q9VL76" }, { "database": "PubMed", "id": "17272269", "url": "https://pubmed.ncbi.nlm.nih.gov/17272269" } ], "uniprot_canonical_ac": "Q9VL76-1" }, { "start_pos": 341, "end_pos": 341, "sequence_org": "R", "sequence_mut": "Q", "comment": "No effect on mitochondrial transcription.", "evidence": [ { "database": "UniProtKB", "id": "Q9VL76", "url": 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In vivo, moderate decrease in mtDNA levels in the third instar larval stage and slight decrease in longevity in the adult.", "evidence": [ { "database": "UniProtKB", "id": "Q9VL76", "url": "https://www.uniprot.org/uniprotkb/Q9VL76" }, { "database": "PubMed", "id": "17272269", "url": "https://pubmed.ncbi.nlm.nih.gov/17272269" } ], "uniprot_canonical_ac": "Q9VL76-1" }, { "start_pos": 442, "end_pos": 442, "sequence_org": "A", "sequence_mut": "P", "comment": "In vitro, loss of mitochondrial transcription. In vivo, significant decrease in complex IV activity, increase in apoptosis and a decrease in cell proliferation. In vivo, results in significant decrease in complex IV activity, increase in apoptosis and a decrease in cell proliferation.", "evidence": [ { "database": "UniProtKB", "id": "Q9VL76", "url": "https://www.uniprot.org/uniprotkb/Q9VL76" }, { "database": "PubMed", "id": "17272269", "url": "https://pubmed.ncbi.nlm.nih.gov/17272269" }, { "database": "PubMed", "id": "22952820", "url": "https://pubmed.ncbi.nlm.nih.gov/22952820" } ], "uniprot_canonical_ac": "Q9VL76-1" }, { "start_pos": 483, "end_pos": 483, "sequence_org": "D", "sequence_mut": "A", "comment": "Loss of hexamer formation. Loss of mitochondrial transcription.", "evidence": [ { "database": "UniProtKB", "id": "Q9VL76", "url": "https://www.uniprot.org/uniprotkb/Q9VL76" }, { "database": "PubMed", "id": "17272269", "url": "https://pubmed.ncbi.nlm.nih.gov/17272269" } ], "uniprot_canonical_ac": "Q9VL76-1" } ], "record_id": "pubmed.17272269", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", 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mitochondrial DNA copy number.", "evidence": [ { "database": "UniProtKB", "id": "Q9VL76", "url": "https://www.uniprot.org/uniprotkb/Q9VL76" }, { "database": "PubMed", "id": "19063859", "url": "https://pubmed.ncbi.nlm.nih.gov/19063859" } ], "uniprot_canonical_ac": "Q9VL76-1" }, { "start_pos": 232, "end_pos": 232, "sequence_org": "D", "sequence_mut": "A", "comment": "Partial increase in mitochondrial DNA copy number.", "evidence": [ { "database": "UniProtKB", "id": "Q9VL76", "url": "https://www.uniprot.org/uniprotkb/Q9VL76" }, { "database": "PubMed", "id": "19063859", "url": "https://pubmed.ncbi.nlm.nih.gov/19063859" } ], "uniprot_canonical_ac": "Q9VL76-1" }, { "start_pos": 267, "end_pos": 267, "sequence_org": "F", "sequence_mut": "A", "comment": "No increase in mitochondrial DNA copy number.", "evidence": [ { "database": "UniProtKB", "id": "Q9VL76", "url": "https://www.uniprot.org/uniprotkb/Q9VL76" }, { "database": "PubMed", "id": "19063859", "url": 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"evidence": [ { "database": "UniProtKB", "id": "Q9VL76", "url": "https://www.uniprot.org/uniprotkb/Q9VL76" }, { "database": "PubMed", "id": "19063859", "url": "https://pubmed.ncbi.nlm.nih.gov/19063859" } ], "uniprot_canonical_ac": "Q9VL76-1" }, { "start_pos": 301, "end_pos": 301, "sequence_org": "R", "sequence_mut": "Q", "comment": "Reduces mitochondrial DNA copy number.", "evidence": [ { "database": "UniProtKB", "id": "Q9VL76", "url": "https://www.uniprot.org/uniprotkb/Q9VL76" }, { "database": "PubMed", "id": "19063859", "url": "https://pubmed.ncbi.nlm.nih.gov/19063859" } ], "uniprot_canonical_ac": "Q9VL76-1" }, { "start_pos": 302, "end_pos": 302, "sequence_org": "P", "sequence_mut": "L", "comment": "Modest reduction in mitochondrial DNA copy number.", "evidence": [ { "database": "UniProtKB", "id": "Q9VL76", "url": "https://www.uniprot.org/uniprotkb/Q9VL76" }, { "database": "PubMed", "id": "19063859", "url": "https://pubmed.ncbi.nlm.nih.gov/19063859" } ], "uniprot_canonical_ac": "Q9VL76-1" }, { "start_pos": 63, "end_pos": 63, "sequence_org": "C", "sequence_mut": "A", "comment": "Does not affect ion and sulfide binding. Results in a partial increase in mitochondrial DNA copy number.", "evidence": [ { "database": "UniProtKB", "id": "Q9VL76", "url": "https://www.uniprot.org/uniprotkb/Q9VL76" }, { "database": "PubMed", "id": "25023283", "url": "https://pubmed.ncbi.nlm.nih.gov/25023283" }, { "database": "PubMed", "id": "19063859", "url": "https://pubmed.ncbi.nlm.nih.gov/19063859" } ], "uniprot_canonical_ac": "Q9VL76-1" }, { "start_pos": 68, "end_pos": 68, "sequence_org": "C", "sequence_mut": "A", "comment": "Loss of ion and sulfide binding, increased protein instability, retains DNA binding, partial increase in mitochondrial DNA copy number; when associated with A-71.", "evidence": [ { "database": "UniProtKB", "id": "Q9VL76", "url": "https://www.uniprot.org/uniprotkb/Q9VL76" }, { "database": "PubMed", "id": "25023283", "url": "https://pubmed.ncbi.nlm.nih.gov/25023283" }, { "database": "PubMed", "id": "19063859", "url": "https://pubmed.ncbi.nlm.nih.gov/19063859" } ], "uniprot_canonical_ac": "Q9VL76-1" }, { "start_pos": 71, "end_pos": 71, "sequence_org": "C", "sequence_mut": "A", "comment": "Loss of ion and sulfide binding, increased protein instability, partial increase in mitochondrial DNA copy number, retains DNA binding; 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Mol. Biol.", "date": "2009", "authors": "Wu Mousheng, Wang Meitian, Nix Jay, Hryshko Larry V, Zheng Lei", "reference": { "type": "PubMed", "id": "19361442", "url": "https://pubmed.ncbi.nlm.nih.gov/19361442" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9VDG5-1", "protein_name": "Sodium/calcium exchanger Calx", "gene_name": "Calx", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q9VDG5", "url": "https://www.uniprot.org/uniprotkb/Q9VDG5" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.19361442", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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Sci.", "date": "1996", "authors": "Schulze D H, Kofuji P, Valdivia C, He S, Luo S, Ruknudin A, Wisel S, Kirby M S, duBell W, Lederer W J", "reference": { "type": "PubMed", "id": "8659862", "url": "https://pubmed.ncbi.nlm.nih.gov/8659862" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9VDG5-1", "protein_name": "Sodium/calcium exchanger Calx", "gene_name": "Calx", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q9VDG5", "url": "https://www.uniprot.org/uniprotkb/Q9VDG5" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.8659862", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Na+/Ca2+ exchanger in Drosophila: cloning, expression, and transport differences.", "journal": "The American journal of physiology", "date": "1997-07", "authors": "Ruknudin A, Valdivia C, Kofuji P, Lederer W J, Schulze D H", "reference": { "type": "PubMed", "id": "9252464", "url": "https://pubmed.ncbi.nlm.nih.gov/9252464" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9VDG5-1", "protein_name": "Sodium/calcium exchanger Calx", "gene_name": "Calx", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q9VDG5", "url": "https://www.uniprot.org/uniprotkb/Q9VDG5" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.9252464", "abstract": "", 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U.S.A.", "date": "1997", "authors": "Schwarz E M, Benzer S", "reference": { "type": "PubMed", "id": "9294196", "url": "https://pubmed.ncbi.nlm.nih.gov/9294196" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9VDG5-1", "protein_name": "Sodium/calcium exchanger Calx", "gene_name": "Calx", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q9VDG5", "url": "https://www.uniprot.org/uniprotkb/Q9VDG5" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.9294196", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functional differences in ionic regulation between alternatively spliced isoforms of the Na+-Ca2+ exchanger from Drosophila melanogaster.", "journal": "J. Gen. Physiol.", "date": "1998", "authors": "Omelchenko A, Dyck C, Hnatowich M, Buchko J, Nicoll D A, Philipson K D, Hryshko L V", "reference": { "type": "PubMed", "id": "9565406", "url": "https://pubmed.ncbi.nlm.nih.gov/9565406" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9VDG5-1", "protein_name": "Sodium/calcium exchanger Calx", "gene_name": "Calx", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q9VDG5", "url": "https://www.uniprot.org/uniprotkb/Q9VDG5" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.9565406", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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"journal": "Cell", "date": "2004", "authors": "Hertzog Maud, van Heijenoort Carine, Didry Dominique, Gaudier Martin, Coutant J\u00e9r\u00f4me, Gigant Beno\u00eet, Didelot G\u00e9rard, Pr\u00e9at Thomas, Knossow Marcel, Guittet Eric, Carlier Marie-France", "reference": { "type": "PubMed", "id": "15163409", "url": "https://pubmed.ncbi.nlm.nih.gov/15163409" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O97428-1", "protein_name": "Ciboulot, isoform A; Ciboulot, isoform B; Ciboulot, isoform D; Ciboulot, isoform E", "gene_name": "cib", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O97428", "url": "https://www.uniprot.org/uniprotkb/O97428" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.15163409", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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Eric, Carlier Marie-France, van Heijenoort Carine, Renault Louis", "reference": { "type": "PubMed", "id": "22193718", "url": "https://pubmed.ncbi.nlm.nih.gov/22193718" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O97428-1", "protein_name": "Ciboulot, isoform A; Ciboulot, isoform B; Ciboulot, isoform D; Ciboulot, isoform E", "gene_name": "cib", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "O97428", "url": "https://www.uniprot.org/uniprotkb/O97428" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.22193718", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mechanism for food texture preference based on grittiness.", "journal": "Current biology : CB", "date": "2021-05-10", "authors": "Li Qiaoran, Montell Craig", "reference": { "type": "PubMed", "id": "33657409", "url": "https://pubmed.ncbi.nlm.nih.gov/33657409" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6NP91-1", "protein_name": "Mechanosensitive cation channel Tmem63", "gene_name": "Tmem63", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q6NP91", "url": "https://www.uniprot.org/uniprotkb/Q6NP91" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.33657409", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Humidity response in Drosophila olfactory sensory neurons requires the mechanosensitive channel TMEM63.", "journal": "Nature communications", "date": "2022-07-02", "authors": "Li Songling, Li Bingxue, Gao Li, Wang Jingwen, Yan Zhiqiang", "reference": { "type": "PubMed", "id": "35780140", "url": "https://pubmed.ncbi.nlm.nih.gov/35780140" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6NP91-1", "protein_name": "Mechanosensitive cation channel Tmem63", "gene_name": "Tmem63", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q6NP91", "url": "https://www.uniprot.org/uniprotkb/Q6NP91" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.35780140", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q7KN92", "url": "https://www.uniprot.org/uniprotkb/Q7KN92" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.17151241", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Golgi targeting of Drosophila melanogaster beta4GalNAcTB requires a DHHC protein family-related protein as a pilot.", "journal": "The Journal of cell biology", "date": "2009-01-12", "authors": "Johswich Anita, Kraft Benjamin, Wuhrer Manfred, Berger Monika, Deelder Andr\u00e9 M, Hokke Cornelis H, Gerardy-Schahn Rita, Bakker Hans", "reference": { "type": "PubMed", "id": "19139268", "url": "https://pubmed.ncbi.nlm.nih.gov/19139268" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7KN92-1", "protein_name": "Beta1,4-N-acetylgalactosaminyltransferase A", "gene_name": "beta4GalNAcTA", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VQK9-1", "protein_name": "Protein beta4GalNAcTB pilot", "gene_name": "GABPI", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VAQ8-1", "protein_name": "Beta1,4-N-acetylgalactosaminyltransferase B", "gene_name": "beta4GalNAcTB", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q7KN92", "url": "https://www.uniprot.org/uniprotkb/Q7KN92" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "mutagenesis": [ { "start_pos": 293, "end_pos": 296, "sequence_org": "DHHS", "sequence_mut": "AAAA", "comment": "No effect on targeting of beta4GalNAcTB to the Golgi.", "evidence": [ { "database": "UniProtKB", "id": "Q9VQK9", "url": "https://www.uniprot.org/uniprotkb/Q9VQK9" }, { "database": "PubMed", "id": "19139268", "url": "https://pubmed.ncbi.nlm.nih.gov/19139268" } ], "uniprot_canonical_ac": "Q9VQK9-1" } ], "record_id": "pubmed.19139268", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Genetic Interactions Between Drosophila sialyltransferase and \u03b21,4-N-acetylgalactosaminyltransferase-A Genes Indicate Their Involvement in the Same Pathway.", "journal": "G3 (Bethesda, Md.)", "date": "2012-06", "authors": "Nakamura Michiko, Pandey Dheeraj, Panin Vladislav M", "reference": { "type": "PubMed", "id": "22690374", "url": "https://pubmed.ncbi.nlm.nih.gov/22690374" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7KN92-1", "protein_name": 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{ "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure of an ex vivoDrosophila TOM complex determined by single-particle cryoEM.", "journal": "IUCrJ", "date": "2025", "authors": "Periasamy Agalya, Ornelas Pamela, Bausewein Thomas, Mitchell Naomi, Zhao Jiamin, Quinn Leonie M, Kuehlbrandt Werner, Gulbis Jacqueline M", "reference": { "type": "PubMed", "id": "39575538", "url": "https://pubmed.ncbi.nlm.nih.gov/39575538" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IRD0-1", "protein_name": "Mitochondrial import receptor subunit TOM6 homolog", "gene_name": "Tom5", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VZL1-1", "protein_name": "Mitochondrial import receptor subunit TOM22 homolog", "gene_name": "mge", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q8IRD0", "url": "https://www.uniprot.org/uniprotkb/Q8IRD0" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.39575538", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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