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spindles in mice.", "journal": "Scientific reports", "date": "2024-02-27", "authors": "Simerly Calvin, Robertson Emily, Harrison Caleb, Ward Sydney, George Charlize, Deleon Jasmine, Hartnett Carrie, Schatten Gerald", "reference": { "type": "PubMed", "id": "38413710", "url": "https://pubmed.ncbi.nlm.nih.gov/38413710" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A2AGT5-1", "protein_name": "Cytoskeleton-associated protein 5", "gene_name": "Ckap5", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "A2AGT5", "url": "https://www.uniprot.org/uniprotkb/A2AGT5" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.38413710", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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Dev.", "date": "1993", "authors": "Miyamoto H, Matsushiro A, Nozaki M", "reference": { "type": "PubMed", "id": "8418809", "url": "https://pubmed.ncbi.nlm.nih.gov/8418809" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q06138-1", "protein_name": "Calcium-binding protein 39", "gene_name": "Cab39", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q06138", "url": "https://www.uniprot.org/uniprotkb/Q06138" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.8418809", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure of cDNAs encoding the triple-helical domain of murine alpha 2 (VI) collagen chain and comparison to human and chick homologues. 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Identification and expression of genetic variants.", "journal": "FEBS Lett.", "date": "1993", "authors": "Strasser P, Gimona M, Moessler H, Herzog M, Small J V", "reference": { "type": "PubMed", "id": "8370452", "url": "https://pubmed.ncbi.nlm.nih.gov/8370452" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q08093-1", "protein_name": "Calponin-2", "gene_name": "Cnn2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q08091-1", "protein_name": "Calponin-1", "gene_name": "Cnn1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q08092-1", "protein_name": "Calponin-1", "gene_name": "CNN1", "tax_name": "Pig" }, { "uniprot_canonical_ac": "Q08094-1", "protein_name": "Calponin-2", "gene_name": "CNN2", "tax_name": "Pig" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q08093", "url": "https://www.uniprot.org/uniprotkb/Q08093" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": 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"journal": "Genomics", "date": "1992", "authors": "Phillips CL, Morgan AL, Lever LW, Wenstrup RJ", "reference": { "type": "PubMed", "id": "1505972", "url": "https://pubmed.ncbi.nlm.nih.gov/1505972" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q01149-1", "protein_name": "Collagen alpha-2(I) chain", "gene_name": "Col1a2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q01149", "url": "https://www.uniprot.org/uniprotkb/Q01149" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.1505972", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Invest. Dermatol.", "date": "1991", "authors": "Phillips C L, Lever L W, Pinnell S R, Quarles L D, Wenstrup R J", "reference": { "type": "PubMed", "id": "1748823", "url": "https://pubmed.ncbi.nlm.nih.gov/1748823" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q01149-1", "protein_name": "Collagen alpha-2(I) chain", "gene_name": "Col1a2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q01149", "url": "https://www.uniprot.org/uniprotkb/Q01149" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.1748823", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of a cell-specific transcriptional enhancer in the first intron of the mouse alpha 2 (type I) collagen gene.", "journal": "Proc. 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cannabinoid receptor interacting protein (CRIP1a) attenuates CB1R signaling in neuronal cells.", "journal": "Cellular signalling", "date": "2015", "authors": "Blume LC, Eldeeb K, Bass CE, Selley DE, Howlett AC", "reference": { "type": "PubMed", "id": "25446256", "url": "https://pubmed.ncbi.nlm.nih.gov/25446256" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5M8N0-1", "protein_name": "CB1 cannabinoid receptor-interacting protein 1", "gene_name": "Cnrip1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { 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Blockade Attenuates Obesity and Adipose Tissue Type 1 Inflammation Through miR-30e-5p Regulation of Delta-Like-4 in Macrophages and Consequently Downregulation of Th1 Cells.", "journal": "Frontiers in immunology", "date": "2019", "authors": "Miranda K, Mehrpouya-Bahrami P, Nagarkatti PS, Nagarkatti M", "reference": { "type": "PubMed", "id": "31134094", "url": "https://pubmed.ncbi.nlm.nih.gov/31134094" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5M8N0-1", "protein_name": "CB1 cannabinoid receptor-interacting protein 1", "gene_name": "Cnrip1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q5M8N0", "url": "https://www.uniprot.org/uniprotkb/Q5M8N0" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.31134094", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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"Topological mapping of complement component C9 by recombinant DNA techniques suggests a novel mechanism for its insertion into target membranes.", "journal": "EMBO J.", "date": "1987", "authors": "Stanley K K, Herz J", "reference": { "type": "PubMed", "id": "2443347", "url": "https://pubmed.ncbi.nlm.nih.gov/2443347" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P06683-1", "protein_name": "Complement component C9", "gene_name": "C9", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P06683", "url": "https://www.uniprot.org/uniprotkb/P06683" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.2443347", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", 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lymphangiogenesis in human gastric cancer.", "journal": "Cancer letters", "date": "2015", "authors": "Sun L, Duan J, Jiang Y, Wang L, Huang N, Lin L, Liao Y, Liao W", "reference": { "type": "PubMed", "id": "25444928", "url": "https://pubmed.ncbi.nlm.nih.gov/25444928" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "E9PXX8-1", "protein_name": "Metastasis-associated in colon cancer protein 1", "gene_name": "Macc1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "E9PXX8", "url": "https://www.uniprot.org/uniprotkb/E9PXX8" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.25444928", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": 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Toxoplasma gondii Infection.", "journal": "mBio", "date": "2020-01-21", "authors": "Steffens Nora, Beuter-Gunia Cornelia, Kravets Elisabeth, Reich Artur, Legewie Larissa, Pfeffer Klaus, Degrandi Daniel", "reference": { "type": "PubMed", "id": "31964735", "url": "https://pubmed.ncbi.nlm.nih.gov/31964735" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q91Z40-1", "protein_name": "Guanylate-binding protein 7", "gene_name": "Gbp7", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q91Z40", "url": "https://www.uniprot.org/uniprotkb/Q91Z40" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.31964735", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } 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[] } ] }, { "title": "GLUT9 is differentially expressed and targeted in the preimplantation embryo.", "journal": "Endocrinology", "date": "2004", "authors": "Carayannopoulos MO, Schlein A, Wyman A, Chi M, Keembiyehetty C, Moley KH", "reference": { "type": "PubMed", "id": "14657010", "url": "https://pubmed.ncbi.nlm.nih.gov/14657010" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3T9X0-1", "protein_name": "Solute carrier family 2, facilitated glucose transporter member 9", "gene_name": "Slc2a9", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q3T9X0", "url": "https://www.uniprot.org/uniprotkb/Q3T9X0" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.14657010", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Commun.", "date": "2014", "authors": "DeBosch BJ, Kluth O, Fujiwara H, Schurmann A, Moley K", "reference": { "type": "PubMed", "id": "25100214", "url": "https://pubmed.ncbi.nlm.nih.gov/25100214" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3T9X0-1", "protein_name": "Solute carrier family 2, facilitated glucose transporter member 9", "gene_name": "Slc2a9", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q3T9X0", "url": "https://www.uniprot.org/uniprotkb/Q3T9X0" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.25100214", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The diabetes gene Zfp69 modulates hepatic insulin sensitivity in mice.", "journal": "Diabetologia", "date": "2015", "authors": "Chung B, Stadion M, Schulz N, Jain D, Scherneck S, Joost HG, Schurmann A", "reference": { "type": "PubMed", "id": "26232096", "url": "https://pubmed.ncbi.nlm.nih.gov/26232096" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A2A761-1", "protein_name": "Zinc finger protein 69", "gene_name": "Zfp69", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "A2A761", "url": "https://www.uniprot.org/uniprotkb/A2A761" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.26232096", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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Karolyn G, Bivona Joseph J, Cousens Phoebe M, Symeonides Menelaos, Ballif Bryan A, Poynter Matthew E, Krementsov Dimitry N", "reference": { "type": "PubMed", "id": "36705532", "url": "https://pubmed.ncbi.nlm.nih.gov/36705532" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O08546-1", "protein_name": "Endotoxic shock protective protein U9-ORF", "gene_name": "U90926", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O08546", "url": "https://www.uniprot.org/uniprotkb/O08546" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.36705532", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cryptosporidium parvum hijacks a host's long noncoding RNA U90926 to evade intestinal epithelial cell-autonomous antiparasitic defense.", "journal": "Frontiers in immunology", "date": "2023", "authors": "Graham Marion L, Li Min, Gong Ai-Yu, Deng Silu, Jin Kehua, Wang Shuhong, Chen Xian-Ming", "reference": { "type": "PubMed", "id": "37346046", "url": "https://pubmed.ncbi.nlm.nih.gov/37346046" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O08546-1", "protein_name": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular determinants of permeation through the cation channel TRPV4.", "journal": "The Journal of biological chemistry", "date": "2002", "authors": "Voets T, Prenen J, Vriens J, Watanabe H, Janssens A, Wissenbach U, Bodding M, Droogmans G, Nilius B", "reference": { "type": "PubMed", "id": "12093812", "url": "https://pubmed.ncbi.nlm.nih.gov/12093812" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9EPK8-1", "protein_name": "Transient receptor potential cation channel subfamily V member 4", "gene_name": "Trpv4", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9EPK8", "url": "https://www.uniprot.org/uniprotkb/Q9EPK8" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 672, "end_pos": 672, "sequence_org": "D", "sequence_mut": "A", "comment": "Greatly reduces Ca(2+) permeation and channel rectification; when associated with A-682.", "evidence": [ { "database": "UniProtKB", "id": "Q9EPK8", "url": 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Regulation of a transient receptor potential (TRP) channel by tyrosine phosphorylation. SRC family kinase-dependent tyrosine phosphorylation of TRPV4 on TYR-253 mediates its response to hypotonic stress.", "journal": "The Journal of biological chemistry", "date": "2003", "authors": "Xu H, Zhao H, Tian W, Yoshida K, Roullet JB, Cohen DM", "reference": { "type": "PubMed", "id": "12538589", "url": "https://pubmed.ncbi.nlm.nih.gov/12538589" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9EPK8-1", "protein_name": "Transient receptor potential cation channel subfamily V member 4", "gene_name": "Trpv4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9HBA0-1", "protein_name": "Transient receptor potential cation channel subfamily V member 4", "gene_name": "TRPV4", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9EPK8", "url": "https://www.uniprot.org/uniprotkb/Q9EPK8" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 253, "end_pos": 253, "sequence_org": "Y", "sequence_mut": "F", "comment": "Results are conflicting as to whether hypotonicity-dependent channel activity is abolished.", "evidence": [ { "database": "UniProtKB", "id": "Q9EPK8", "url": "https://www.uniprot.org/uniprotkb/Q9EPK8" }, { "database": "PubMed", "id": "14691263", "url": "https://pubmed.ncbi.nlm.nih.gov/14691263" }, { "database": "PubMed", "id": "12538589", "url": "https://pubmed.ncbi.nlm.nih.gov/12538589" } ], "uniprot_canonical_ac": "Q9EPK8-1" } ], "phosphorylation": [ { "start_pos": 253, "end_pos": 253, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by LYN", "evidence": [ { "database": "UniProtKB", "id": "Q9EPK8", "url": "https://www.uniprot.org/uniprotkb/Q9EPK8" }, { "database": "iPTMnet", "id": "Q9EPK8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9EPK8" }, { "database": "PubMed", "id": "12538589", "url": "https://pubmed.ncbi.nlm.nih.gov/12538589" } ], "site_lbl": "Tyr253", "uniprot_canonical_ac": "Q9EPK8-1" }, { "start_pos": 253, "end_pos": 253, "kinase_uniprot_canonical_ac": "P07948-1", "kinase_gene_name": "LYN", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9HBA0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9HBA0" }, { "database": "PubMed", "id": "12538589", "url": "https://pubmed.ncbi.nlm.nih.gov/12538589" } ], "site_lbl": "Tyr253", "uniprot_canonical_ac": "Q9HBA0-1" }, { "start_pos": 411, "end_pos": 411, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9HBA0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9HBA0" }, { "database": "PubMed", "id": "12538589", "url": "https://pubmed.ncbi.nlm.nih.gov/12538589" } ], "site_lbl": "Tyr411", "uniprot_canonical_ac": "Q9HBA0-1" } ], "record_id": "pubmed.12538589", "abstract": "", "glycosylation": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 2 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]