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"date": "2010-10", "authors": "Kulich Ivan, Cole Rex, Drdov\u00e1 Edita, Cvrckov\u00e1 Fatima, Soukup Ales, Fowler John, Z\u00e1rsk\u00fd Viktor", "reference": { "type": "PubMed", "id": "20618910", "url": "https://pubmed.ncbi.nlm.nih.gov/20618910" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9CAK4-1", "protein_name": "Protein ROH1A", "gene_name": "ROH1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93YU5-1", "protein_name": "Exocyst complex component SEC8", "gene_name": "SEC8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZD3-1", "protein_name": "Exocyst complex component EXO70A1", "gene_name": "EXO70A1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FY95-1", "protein_name": "Exocyst complex component EXO70C1", "gene_name": "EXO70C1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9CAK4", "url": 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0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis TOBAMOVIRUS MULTIPLICATION (TOM) 2 locus encodes a transmembrane protein that interacts with TOM1.", "journal": "EMBO J.", "date": "2003", "authors": "Tsujimoto Yayoi, Numaga Takuro, Ohshima Kiyoshi, Yano Masa-Aki, Ohsawa Ryuji, Goto Derek B, Naito Satoshi, Ishikawa Masayuki", "reference": { "type": "PubMed", "id": "12514139", "url": "https://pubmed.ncbi.nlm.nih.gov/12514139" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FEG2-1", "protein_name": "Tobamovirus multiplication protein 1", "gene_name": "TOM1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H960-1", "protein_name": "Tobamovirus multiplication protein 2B", "gene_name": "TOM2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C5W7-1", "protein_name": "Tobamovirus multiplication protein 2A", "gene_name": "TOM2A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FEG2", "url": "https://www.uniprot.org/uniprotkb/Q9FEG2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12514139", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Subcellular localization of host and viral proteins associated with tobamovirus RNA replication.", "journal": "EMBO J.", "date": "2003", "authors": "Hagiwara Yuka, Komoda Keisuke, Yamanaka Takuya, Tamai Atsushi, Meshi Tetsuo, Funada Ryo, Tsuchiya Tomohiro, Naito Satoshi, Ishikawa Masayuki", "reference": { "type": "PubMed", "id": "12514140", "url": "https://pubmed.ncbi.nlm.nih.gov/12514140" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FEG2-1", "protein_name": "Tobamovirus multiplication protein 1", "gene_name": "TOM1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C5W7-1", "protein_name": "Tobamovirus multiplication protein 2A", "gene_name": "TOM2A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { 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"Effects of the tom1 mutation of Arabidopsis thaliana on the multiplication of tobacco mosaic virus RNA in protoplasts.", "journal": "Journal of virology", "date": "1993-09", "authors": "Ishikawa M, Naito S, Ohno T", "reference": { "type": "PubMed", "id": "8350399", "url": "https://pubmed.ncbi.nlm.nih.gov/8350399" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FEG2-1", "protein_name": "Tobamovirus multiplication protein 1", "gene_name": "TOM1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FEG2", "url": "https://www.uniprot.org/uniprotkb/Q9FEG2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.8350399", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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cress" }, { "uniprot_canonical_ac": "Q9SUT9-1", "protein_name": "Reticulon-like protein B2", "gene_name": "RTNLB2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FFS0", "url": "https://www.uniprot.org/uniprotkb/Q9FFS0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15494553", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", 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"glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 43, "end_pos": 43, "sequence_org": "C", "sequence_mut": "Y", "comment": "In knu; induces flowers that are conditionally male sterile and contains ectopic stamens and carpels that originate from placental tissue within developing gynoecia.", "evidence": [ { "database": "UniProtKB", "id": "Q9FFX4", "url": "https://www.uniprot.org/uniprotkb/Q9FFX4" }, { "database": "PubMed", "id": "15240552", "url": "https://pubmed.ncbi.nlm.nih.gov/15240552" } ], "uniprot_canonical_ac": "Q9FFX4-1" } ], "record_id": "pubmed.15240552", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "ABR1, an APETALA2-domain transcription factor that functions as a repressor of ABA response in Arabidopsis.", "journal": "Plant physiology", "date": "2005-11", "authors": "Pandey Girdhar K, Grant John J, Cheong Yong Hwa, Kim Beom Gi, Li Legong, Luan Sheng", "reference": { "type": "PubMed", "id": "16227468", "url": "https://pubmed.ncbi.nlm.nih.gov/16227468" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FGF8-1", "protein_name": "Ethylene-responsive transcription factor ABR1", "gene_name": "ABR1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FGF8", "url": "https://www.uniprot.org/uniprotkb/Q9FGF8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16227468", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A dual-function transcription factor, AtYY1, is a novel negative regulator of the Arabidopsis ABA response network.", "journal": "Mol. Plant", "date": "2016", "authors": "Li Tian, Wu Xiu-Yun, Li Hui, Song Jian-Hui, Liu Jin-Yuan", "reference": { "type": "PubMed", "id": "26961720", "url": "https://pubmed.ncbi.nlm.nih.gov/26961720" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FGF8-1", "protein_name": "Ethylene-responsive transcription factor ABR1", "gene_name": "ABR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q2V3L3-1", "protein_name": "Zinc finger transcription factor YY1", "gene_name": "YY1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FGF8", "url": "https://www.uniprot.org/uniprotkb/Q9FGF8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.26961720", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Egg cell-secreted EC1 triggers sperm cell activation during double fertilization.", "journal": "Science (New York, N.Y.)", "date": "2012-11-23", "authors": "Sprunck Stefanie, Rademacher Svenja, Vogler Frank, Gheyselinck Jacqueline, Grossniklaus Ueli, Dresselhaus Thomas", "reference": { "type": "PubMed", "id": "23180860", "url": "https://pubmed.ncbi.nlm.nih.gov/23180860" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FGG1-1", "protein_name": "Egg cell-secreted protein 1.5", "gene_name": "EC1.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJ23-1", "protein_name": "Egg cell-secreted protein 1.3", "gene_name": "EC1.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJ24-1", "protein_name": "Egg cell-secreted protein 1.2", "gene_name": "EC1.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRD8-1", "protein_name": "Egg cell-secreted protein 1.1", "gene_name": "EC1.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T039-1", "protein_name": "Egg cell-secreted protein 1.4", "gene_name": "EC1.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JP36-1", "protein_name": "Protein HAPLESS 2", "gene_name": "HAP2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FGG1", "url": "https://www.uniprot.org/uniprotkb/Q9FGG1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.23180860", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Tonoplast intrinsic proteins AtTIP2;1 and AtTIP2;3 facilitate NH3 transport into the vacuole.", "journal": "Plant physiology", "date": "2005-02", "authors": "Loqu\u00e9 Dominique, Ludewig Uwe, Yuan Lixing, von Wir\u00e9n Nicolaus", "reference": { "type": "PubMed", "id": "15665250", "url": "https://pubmed.ncbi.nlm.nih.gov/15665250" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FGL2-1", "protein_name": "Aquaporin TIP2-3", "gene_name": "TIP2-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q41951-1", "protein_name": "Aquaporin TIP2-1", "gene_name": "TIP2-1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FGL2", "url": "https://www.uniprot.org/uniprotkb/Q9FGL2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15665250", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis thaliana histone deacetylase 1 (AtHD1) is localized in euchromatic regions and demonstrates histone deacetylase activity in vitro.", "journal": "Cell research", "date": "2006-05", "authors": "Fong Paulus M, Tian Lu, Chen Z Jeffrey", "reference": { "type": "PubMed", "id": "16699543", "url": "https://pubmed.ncbi.nlm.nih.gov/16699543" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FH09-1", "protein_name": "Histone deacetylase 7", "gene_name": "HDA7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22446-1", "protein_name": "Histone deacetylase 19", "gene_name": "HD1; HDA19", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FH09", "url": "https://www.uniprot.org/uniprotkb/Q9FH09" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16699543", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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Proteins and proteomics", "date": "2018-01", "authors": "Kranz-Finger Sarah, Mahmoud Osama, Ricklefs Esther, Ditz Nikolas, Bakkes Patrick J, Urlacher Vlada B", "reference": { "type": "PubMed", "id": "28734978", "url": "https://pubmed.ncbi.nlm.nih.gov/28734978" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FH66-1", "protein_name": "Cytochrome P450 71A16", "gene_name": "CYP71A16", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FH66", "url": "https://www.uniprot.org/uniprotkb/Q9FH66" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.28734978", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Calmodulin-like proteins from Arabidopsis and tomato are involved in host defense against Pseudomonas syringae pv. tomato.", "journal": "Plant molecular biology", "date": "2005-08", "authors": "Chiasson David, Ekengren Sophia K, Martin Gregory B, Dobney Stephanie L, Snedden Wayne A", "reference": { "type": "PubMed", "id": "16240180", "url": "https://pubmed.ncbi.nlm.nih.gov/16240180" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FI19-1", "protein_name": "Probable calcium-binding protein CML43", "gene_name": "CML43", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVG9-1", "protein_name": "Calcium-binding protein CML42", "gene_name": "CML42", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FI19", "url": "https://www.uniprot.org/uniprotkb/Q9FI19" } ], "common_name": 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[] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Xyloglucan endotransglucosylase/hydrolase (XTH) overexpression affects growth and cell wall mechanics in etiolated Arabidopsis hypocotyls.", "journal": "Journal of experimental botany", "date": "2013-05", "authors": "Miedes Eva, Suslov Dmitry, Vandenbussche Filip, Kenobi Kim, Ivakov Alexander, Van Der Straeten Dominique, Lorences Ester P, Mellerowicz Ewa J, Verbelen Jean-Pierre, Vissenberg Kris", "reference": { "type": "PubMed", "id": "23585673", "url": "https://pubmed.ncbi.nlm.nih.gov/23585673" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FI31-1", "protein_name": "Xyloglucan endotransglucosylase/hydrolase protein 20", "gene_name": "XTH20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0D1-1", "protein_name": "Xyloglucan endotransglucosylase/hydrolase protein 19", "gene_name": "XTH19", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FI31", "url": "https://www.uniprot.org/uniprotkb/Q9FI31" } ], "common_name": "Mouse-ear 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inflorescence stems.", "journal": "The Plant journal : for cell and molecular biology", "date": "2014-11", "authors": "Pitaksaringkarn Weerasak, Matsuoka Keita, Asahina Masashi, Miura Kenji, Sage-Ono Kimiyo, Ono Michiyuki, Yokoyama Ryusuke, Nishitani Kazuhiko, Ishii Tadashi, Iwai Hiroaki, Satoh Shinobu", "reference": { "type": "PubMed", "id": "25182467", "url": "https://pubmed.ncbi.nlm.nih.gov/25182467" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FI31-1", "protein_name": "Xyloglucan endotransglucosylase/hydrolase protein 20", "gene_name": "XTH20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49697-1", "protein_name": "NAC domain-containing protein 71", "gene_name": "NAC071", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LS24-1", "protein_name": "NAC domain-containing protein 96", "gene_name": "NAC096", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0D1-1", "protein_name": "Xyloglucan 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[] } ] }, { "title": "A homolog of ScRAD5 is involved in DNA repair and homologous recombination in Arabidopsis.", "journal": "Plant physiology", "date": "2008-04", "authors": "Chen I-Peng, Mannuss Anja, Orel Nadiya, Heitzeberg Fabian, Puchta Holger", "reference": { "type": "PubMed", "id": "18310306", "url": "https://pubmed.ncbi.nlm.nih.gov/18310306" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FIY7-1", "protein_name": "DNA repair protein RAD5B", "gene_name": "RAD5B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FNI6-1", "protein_name": "DNA repair protein RAD5A", "gene_name": "RAD5A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FIY7", "url": "https://www.uniprot.org/uniprotkb/Q9FIY7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A gamma-glutamyl transpeptidase-independent pathway of glutathione catabolism to glutamate via 5-oxoproline in Arabidopsis.", "journal": "Plant physiology", "date": "2008-11", "authors": "Ohkama-Ohtsu Naoko, Oikawa Akira, Zhao Ping, Xiang Chengbin, Saito Kazuki, Oliver David J", "reference": { "type": "PubMed", "id": "18768907", "url": "https://pubmed.ncbi.nlm.nih.gov/18768907" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FIZ7-1", "protein_name": "5-oxoprolinase 1", "gene_name": "OXP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84WV9-1", "protein_name": "Glutaminyl-peptide cyclotransferase", "gene_name": "QCT; QC", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FIZ7", "url": "https://www.uniprot.org/uniprotkb/Q9FIZ7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18768907", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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putative protein-repair enzyme.", "journal": "The Biochemical journal", "date": "2005-06-15", "authors": "Fortpied Juliette, Gemayel Rita, Stroobant Vincent, van Schaftingen Emile", "reference": { "type": "PubMed", "id": "15705060", "url": "https://pubmed.ncbi.nlm.nih.gov/15705060" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LEW8-1", "protein_name": "Protein-ribulosamine 3-kinase, chloroplastic", "gene_name": "T27I15_170", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LEW8", "url": "https://www.uniprot.org/uniprotkb/Q9LEW8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15705060", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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Plant Microbe Interact.", "date": "2005", "authors": "De Vos Martin, Van Oosten Vivian R, Van Poecke Remco M P, Van Pelt Johan A, Pozo Maria J, Mueller Martin J, Buchala Antony J, M\u00e9traux Jean-Pierre, Van Loon L C, Dicke Marcel, Pieterse Corn\u00e9 M J", "reference": { "type": "PubMed", "id": "16167763", "url": "https://pubmed.ncbi.nlm.nih.gov/16167763" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LPU7-1", "protein_name": "Indole glucosinolate O-methyltransferase 2", "gene_name": "IGMT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LPU5-1", "protein_name": "Indole glucosinolate O-methyltransferase 1", "gene_name": "IGMT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LPU8-1", "protein_name": "Indole glucosinolate O-methyltransferase 4", "gene_name": "IGMT4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LPU7", "url": "https://www.uniprot.org/uniprotkb/Q9LPU7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16167763", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cytosolic HSP90 regulates the heat shock response that is responsible for heat acclimation in Arabidopsis thaliana.", "journal": "J. 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Natl. Acad. Sci. U.S.A.", "date": "2013", "authors": "Sun Tao, Germain Arnaud, Giloteaux Ludovic, Hammani Kamel, Barkan Alice, Hanson Maureen R, Bentolila St\u00e9phane", "reference": { "type": "PubMed", "id": "23487777", "url": "https://pubmed.ncbi.nlm.nih.gov/23487777" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LN01-1", "protein_name": "Pentatricopeptide repeat-containing protein At1g08070, chloroplastic", "gene_name": "OTP82; PCMP-H12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L440-1", "protein_name": "Organelle RRM domain-containing protein 1, chloroplastic", "gene_name": "ORRM1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WQW5-1", "protein_name": "Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial", "gene_name": "PCMP-H51", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LN01", "url": "https://www.uniprot.org/uniprotkb/Q9LN01" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.23487777", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis Rad51B is important for double-strand DNA breaks repair in somatic cells.", "journal": "Plant Mol. Biol.", "date": "2005", "authors": "Osakabe Keishi, Abe Kiyomi, Yamanouchi Hiroaki, Takyuu Toshio, Yoshioka Terutaka, Ito Yuji, Kato Tomohiko, Tabata Satoshi, Kurei Shunsuke, Yoshioka Yasushi, Machida Yasunori, Seki Motoaki, Kobayashi Masatomo, Shinozaki Kazuo, Ichikawa Hiroaki, Toki Seiichi", "reference": { "type": "PubMed", "id": "15952068", "url": "https://pubmed.ncbi.nlm.nih.gov/15952068" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LQQ2-1", "protein_name": "DNA repair protein RAD51 homolog 4", "gene_name": "RAD51D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SK02-1", "protein_name": "DNA repair protein RAD51 homolog 2", "gene_name": "RAD51B", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LQQ2", "url": "https://www.uniprot.org/uniprotkb/Q9LQQ2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", 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"2013-06", "authors": "Jehle Anna Kristina, Lipschis Martin, Albert Markus, Fallahzadeh-Mamaghani Vahid, F\u00fcrst Ursula, Mueller Katharina, Felix Georg", "reference": { "type": "PubMed", "id": "23898033", "url": "https://pubmed.ncbi.nlm.nih.gov/23898033" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LNV9-1", "protein_name": "Receptor-like protein 1", "gene_name": "RLP1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LNV9", "url": "https://www.uniprot.org/uniprotkb/Q9LNV9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.23898033", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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}, { "uniprot_canonical_ac": "Q9ZSJ2-1", "protein_name": "UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 1", "gene_name": "RGXT1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FXA7", "url": "https://www.uniprot.org/uniprotkb/Q9FXA7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18755189", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { 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"total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "NPSN11 is a cell plate-associated SNARE protein that interacts with the syntaxin KNOLLE.", "journal": "Plant Physiol.", "date": "2002", "authors": "Zheng Haiyan, Bednarek Sebastian Y, Sanderfoot Anton A, Alonso Jose, Ecker Joseph R, Raikhel Natasha V", "reference": { "type": "PubMed", "id": "12068098", "url": "https://pubmed.ncbi.nlm.nih.gov/12068098" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LNH6-1", "protein_name": "Novel plant SNARE 12", "gene_name": "NPSN12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q944A9-1", "protein_name": "Novel plant SNARE 11", "gene_name": "NPSN11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42374-1", "protein_name": "Syntaxin-related protein KNOLLE", "gene_name": "KN", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LNH6", "url": "https://www.uniprot.org/uniprotkb/Q9LNH6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12068098", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A new triterpene synthase from Arabidopsis thaliana produces a tricyclic triterpene with two hydroxyl groups.", "journal": "Organic letters", "date": "2006-06-22", "authors": "Xiang Ting, Shibuya Masaaki, Katsube Yuji, Tsutsumi Takehiko, Otsuka Miyuki, Zhang Hong, Masuda Kazuo, Ebizuka Yutaka", "reference": { "type": "PubMed", "id": "16774269", "url": "https://pubmed.ncbi.nlm.nih.gov/16774269" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FR95-1", "protein_name": "Arabidiol synthase", "gene_name": "PEN1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FR95", "url": "https://www.uniprot.org/uniprotkb/Q9FR95" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16774269", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Stereochemistry of water addition in triterpene synthesis: the structure of arabidiol.", "journal": "Organic letters", "date": "2007-05-24", "authors": "Kolesnikova Mariya D, Obermeyer Allie C, Wilson William K, Lynch David A, Xiong Quanbo, Matsuda Seiichi P T", "reference": { "type": "PubMed", "id": "17474751", "url": "https://pubmed.ncbi.nlm.nih.gov/17474751" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FR95-1", "protein_name": "Arabidiol synthase", "gene_name": "PEN1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FR95", "url": "https://www.uniprot.org/uniprotkb/Q9FR95" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17474751", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The alpha-N-acetyl-glucosaminidase gene is transcriptionally activated in male and female gametes prior to fertilization and is essential for seed development in Arabidopsis.", "journal": "Journal of experimental botany", "date": "2008", "authors": "Ronceret Arnaud, Gadea-Vacas Jose, Guilleminot Jocelyne, Devic Martine", "reference": { "type": "PubMed", "id": "18782908", "url": "https://pubmed.ncbi.nlm.nih.gov/18782908" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FNA3-1", "protein_name": "Alpha-N-acetylglucosaminidase", "gene_name": "CYL1; NAGLU", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FNA3", "url": "https://www.uniprot.org/uniprotkb/Q9FNA3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18782908", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", 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Plant Physiol.", "date": "2013", "authors": "Xiao Jun, Zhang Hong, Xing Lijing, Xu Shujuan, Liu Huanhuan, Chong Kang, Xu Yunyuan", "reference": { "type": "PubMed", "id": "23273925", "url": "https://pubmed.ncbi.nlm.nih.gov/23273925" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LSR7-1", "protein_name": "Agamous-like MADS-box protein AGL70", "gene_name": "AGL70; MAF3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLF7-1", "protein_name": "Histone acetyltransferase of the MYST family 1", "gene_name": "HAM1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXD7-1", "protein_name": "Histone acetyltransferase of the MYST family 2", "gene_name": "HAM2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LSR7", "url": "https://www.uniprot.org/uniprotkb/Q9LSR7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.23273925", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Gene regulatory variation mediates flowering responses to vernalization along an altitudinal gradient in Arabidopsis.", "journal": "Plant physiology", "date": "2014-12", "authors": "Suter L\u00e9onie, R\u00fcegg Marlene, Zemp Niklaus, Hennig Lars, Widmer Alex", "reference": { "type": "PubMed", "id": "25339407", "url": "https://pubmed.ncbi.nlm.nih.gov/25339407" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LSR7-1", "protein_name": "Agamous-like MADS-box protein AGL70", "gene_name": "AGL70; 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cloning, functional expression, and characterization of the raffinose oligosaccharide chain elongation enzyme, galactan:galactan galactosyltransferase, from common bugle leaves.", "journal": "Plant Physiol.", "date": "2004", "authors": "Tapernoux-L\u00fcthi Esther M, B\u00f6hm Andreas, Keller Felix", "reference": { "type": "PubMed", "id": "15034167", "url": "https://pubmed.ncbi.nlm.nih.gov/15034167" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FT97-1", "protein_name": 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], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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Ritter Andr\u00e9s, Iniesto Elisa, De Clercq Rebecca, Staes An, Van Leene Jelle, Rubio Vicente, Gevaert Kris, De Jaeger Geert, Pauwels Laurens, Goossens Alain", "reference": { "type": "PubMed", "id": "27497447", "url": "https://pubmed.ncbi.nlm.nih.gov/27497447" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FKT3-1", "protein_name": "Ubiquitin-conjugating enzyme E2 30", "gene_name": "UBC30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZPH2-1", "protein_name": "Monothiol glutaredoxin-S17", "gene_name": "GRXS17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RX26-1", "protein_name": "E3 ubiquitin-protein ligase RGLG3", "gene_name": "RGLG3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q67XG0-1", "protein_name": "Two-on-two hemoglobin-3", "gene_name": "GLB3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SAL0-1", "protein_name": "E3 ubiquitin-protein ligase RGLG4", "gene_name": "RGLG4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FKT3", "url": "https://www.uniprot.org/uniprotkb/Q9FKT3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.27497447", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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Cells", "date": "2009", "authors": "Lee Sang Min, Hoang My Hanh Thi, Han Hay Ju, Kim Ho Soo, Lee Kyunghee, Kim Kyung Eun, Kim Doh Hoon, Lee Sang Yeol, Chung Woo Sik", "reference": { "type": "PubMed", "id": "19326079", "url": "https://pubmed.ncbi.nlm.nih.gov/19326079" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FJX3-1", "protein_name": "Mitochondrial outer membrane protein porin 2", "gene_name": "VDAC2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKM2-1", "protein_name": "Mitochondrial outer membrane protein porin 4", "gene_name": "VDAC4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRH5-1", "protein_name": "Mitochondrial outer membrane protein porin 1", "gene_name": "VDAC1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMX3-1", "protein_name": "Mitochondrial outer membrane protein porin 3", "gene_name": "VDAC3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FJX3", "url": "https://www.uniprot.org/uniprotkb/Q9FJX3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19326079", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Voltage-dependent anion channel 2 of Arabidopsis thaliana (AtVDAC2) is involved in ABA-mediated early seedling development.", "journal": "International journal of molecular sciences", "date": "2009-05-26", "authors": "Yan Jinping, He Han, Tong Shibo, Zhang Wanrong, Wang Jianmei, Li Xufeng, Yang Yi", "reference": { "type": "PubMed", "id": "19582214", "url": "https://pubmed.ncbi.nlm.nih.gov/19582214" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FJX3-1", "protein_name": "Mitochondrial outer membrane protein porin 2", "gene_name": "VDAC2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FJX3", "url": "https://www.uniprot.org/uniprotkb/Q9FJX3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19582214", 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"date": "2007-11", "authors": "Greer Stephen, Wen Miao, Bird David, Wu Xuemin, Samuels Lacey, Kunst Ljerka, Jetter Reinhard", "reference": { "type": "PubMed", "id": "17905869", "url": "https://pubmed.ncbi.nlm.nih.gov/17905869" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FVS9-1", "protein_name": "Alkane hydroxylase MAH1", "gene_name": "CYP96A15", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FVS9", "url": "https://www.uniprot.org/uniprotkb/Q9FVS9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17905869", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Bot.", "date": "2009", "authors": "Wen Miao, Jetter Reinhard", "reference": { "type": "PubMed", "id": "19346242", "url": "https://pubmed.ncbi.nlm.nih.gov/19346242" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FVS9-1", "protein_name": "Alkane hydroxylase MAH1", "gene_name": "CYP96A15", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FVS9", "url": "https://www.uniprot.org/uniprotkb/Q9FVS9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19346242", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Gamma carbonic anhydrases in plant mitochondria.", "journal": "Plant Mol. Biol.", "date": "2004", "authors": "Parisi Gustavo, Perales Mariano, Fornasari Mar\u00eda Silvina, Colaneri Alejandro, Gonz\u00e1lez-Schain Nahuel, G\u00f3mez-Casati Diego, Zimmermann Sabrina, Brennicke Axel, Araya Alejandro, Ferry James G, Echave Juli\u00e1n, Zabaleta Eduardo", "reference": { "type": "PubMed", "id": "15604675", "url": "https://pubmed.ncbi.nlm.nih.gov/15604675" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FWR5-1", "protein_name": "Gamma carbonic anhydrase 1, mitochondrial", "gene_name": "GAMMACA1; GAMMA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94AU7-1", "protein_name": "Gamma carbonic anhydrase 3, mitochondrial", "gene_name": "GAMMACA3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C6B3-1", "protein_name": "Gamma carbonic anhydrase 2, mitochondrial", "gene_name": "GAMMACA2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FWR5", "url": "https://www.uniprot.org/uniprotkb/Q9FWR5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15604675", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Carbonic anhydrase subunits form a matrix-exposed domain attached to the membrane arm of mitochondrial complex I in plants.", "journal": "J. Biol. 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Natl. Acad. Sci. U.S.A.", "date": "2000", "authors": "Cho H T, Cosgrove D J", "reference": { "type": "PubMed", "id": "10931949", "url": "https://pubmed.ncbi.nlm.nih.gov/10931949" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LDR9-1", "protein_name": "Expansin-A10", "gene_name": "EXPA10; SDG35", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LDR9", "url": "https://www.uniprot.org/uniprotkb/Q9LDR9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10931949", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ancient asymmetries in the evolution of flowers.", "journal": "Curr. 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events.", "journal": "The Plant journal : for cell and molecular biology", "date": "2010-10", "authors": "Gilding Edward K, Marks M David", "reference": { "type": "PubMed", "id": "21070410", "url": "https://pubmed.ncbi.nlm.nih.gov/21070410" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LE63-1", "protein_name": "Transcription factor MYB106", "gene_name": "MYB106", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LE63", "url": "https://www.uniprot.org/uniprotkb/Q9LE63" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.21070410", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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