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"uniprot_canonical_ac": "Q8BUW1-1", "protein_name": "Potassium channel subfamily K member 10", "gene_name": "Kcnk10", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P97438-1", "protein_name": "Potassium channel subfamily K member 2", "gene_name": "Kcnk2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BUW1", "url": "https://www.uniprot.org/uniprotkb/Q8BUW1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 148, "end_pos": 148, "sequence_org": "H", "sequence_mut": "A", "comment": "Decreased basal mean amplitude of channel current.", "evidence": [ { "database": "UniProtKB", "id": "Q8BUW1", "url": "https://www.uniprot.org/uniprotkb/Q8BUW1" }, { "database": "PubMed", "id": "19667202", "url": "https://pubmed.ncbi.nlm.nih.gov/19667202" } ], "uniprot_canonical_ac": "Q8BUW1-1" }, { "start_pos": 148, "end_pos": 148, "sequence_org": "H", "sequence_mut": "K", "comment": "Increased basal mean amplitude of channel current.", "evidence": [ { "database": "UniProtKB", "id": "Q8BUW1", "url": "https://www.uniprot.org/uniprotkb/Q8BUW1" }, { "database": "PubMed", "id": "19667202", "url": "https://pubmed.ncbi.nlm.nih.gov/19667202" } ], "uniprot_canonical_ac": "Q8BUW1-1" }, { "start_pos": 279, "end_pos": 279, "sequence_org": "F", "sequence_mut": "Y", "comment": "No effect on extracellular pH sensing. 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Inverts pH-dependent gating, with channel conductance being inhibited by acidic pH and activated by basic pH; when associated with Y-279, S-284, D-285 and L-290.", "evidence": [ { "database": "UniProtKB", "id": "Q8BUW1", "url": "https://www.uniprot.org/uniprotkb/Q8BUW1" }, { "database": "PubMed", "id": "19667202", "url": "https://pubmed.ncbi.nlm.nih.gov/19667202" } ], "uniprot_canonical_ac": "Q8BUW1-1" }, { "start_pos": 290, "end_pos": 290, "sequence_org": "R", "sequence_mut": "L", "comment": "Loss of K(+) channel activity. Normal basal conductance but reduced inhibition induced by a pH shift from 7.2 to 8; when associated with Y-279. 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In heterodimer with KCNK10, displays increased basal current and KCNK10-like pH-dependence.", "evidence": [ { "database": "UniProtKB", "id": "P97438", "url": "https://www.uniprot.org/uniprotkb/P97438" }, { "database": "PubMed", "id": "27035963", "url": "https://pubmed.ncbi.nlm.nih.gov/27035963" }, { "database": "PubMed", "id": "19667202", "url": "https://pubmed.ncbi.nlm.nih.gov/19667202" } ], "uniprot_canonical_ac": "P97438-1" }, { "start_pos": 126, "end_pos": 126, "sequence_org": "N", "sequence_mut": "K", "comment": "In homodimer, displays decreased basal current. In heterodimer with KCNK10, displays decreased basal current and KCNK10-like pH-dependence.", "evidence": [ { "database": "UniProtKB", "id": "P97438", "url": "https://www.uniprot.org/uniprotkb/P97438" }, { "database": "PubMed", "id": "27035963", "url": "https://pubmed.ncbi.nlm.nih.gov/27035963" }, { "database": "PubMed", "id": "19667202", "url": "https://pubmed.ncbi.nlm.nih.gov/19667202" } ], "uniprot_canonical_ac": "P97438-1" }, { "start_pos": 232, "end_pos": 232, "sequence_org": "F", "sequence_mut": "A", "comment": "No effect on pH-dependence.", "evidence": [ { "database": "UniProtKB", "id": "P97438", "url": "https://www.uniprot.org/uniprotkb/P97438" }, { "database": "PubMed", "id": "19667202", "url": "https://pubmed.ncbi.nlm.nih.gov/19667202" } ], "uniprot_canonical_ac": "P97438-1" }, { "start_pos": 232, "end_pos": 232, "sequence_org": "F", "sequence_mut": "K", "comment": "No effect on pH-dependence.", "evidence": [ { "database": "UniProtKB", "id": "P97438", "url": 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"2016-04-12", "authors": "Levitz Joshua, Royal Perrine, Comoglio Yannick, Wdziekonski Brigitte, Schaub S\u00e9bastien, Clemens Daniel M, Isacoff Ehud Y, Sandoz Guillaume", "reference": { "type": "PubMed", "id": "27035963", "url": "https://pubmed.ncbi.nlm.nih.gov/27035963" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BUW1-1", "protein_name": "Potassium channel subfamily K member 10", "gene_name": "Kcnk10", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O88454-1", "protein_name": "Potassium channel subfamily K member 4", "gene_name": "Kcnk4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P97438-1", "protein_name": "Potassium channel subfamily K member 2", "gene_name": "Kcnk2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BUW1", "url": "https://www.uniprot.org/uniprotkb/Q8BUW1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 151, "end_pos": 151, "sequence_org": "L", "sequence_mut": "A", "comment": "Mimics the deprotonated state and decreases the basal current. In heterodimer with KCNK2, it displays KCNK2-like pH dependence.", "evidence": [ { "database": "UniProtKB", "id": "Q8BUW1", "url": "https://www.uniprot.org/uniprotkb/Q8BUW1" }, { "database": "PubMed", "id": "27035963", "url": "https://pubmed.ncbi.nlm.nih.gov/27035963" } ], "uniprot_canonical_ac": "Q8BUW1-1" }, { "start_pos": 151, "end_pos": 151, "sequence_org": "L", "sequence_mut": "K", "comment": "Mimics the protonated state and increases the basal current. In heterodimer with KCNK2, it displays KCNK2-like pH dependence.", "evidence": [ { "database": "UniProtKB", "id": "Q8BUW1", "url": "https://www.uniprot.org/uniprotkb/Q8BUW1" }, { "database": "PubMed", "id": "27035963", "url": "https://pubmed.ncbi.nlm.nih.gov/27035963" } ], "uniprot_canonical_ac": "Q8BUW1-1" }, { "start_pos": 126, "end_pos": 126, "sequence_org": "N", "sequence_mut": "A", "comment": "In homodimer, displays increased basal current. In heterodimer with KCNK10, displays increased basal current and KCNK10-like pH-dependence.", "evidence": [ { "database": "UniProtKB", "id": "P97438", "url": "https://www.uniprot.org/uniprotkb/P97438" }, { "database": "PubMed", "id": "27035963", "url": "https://pubmed.ncbi.nlm.nih.gov/27035963" }, { "database": "PubMed", "id": "19667202", "url": "https://pubmed.ncbi.nlm.nih.gov/19667202" } ], "uniprot_canonical_ac": "P97438-1" }, { "start_pos": 126, "end_pos": 126, "sequence_org": "N", "sequence_mut": "K", "comment": "In homodimer, displays decreased basal current. In heterodimer with KCNK10, displays decreased basal current and KCNK10-like pH-dependence.", "evidence": [ { "database": "UniProtKB", "id": "P97438", "url": "https://www.uniprot.org/uniprotkb/P97438" }, { "database": "PubMed", "id": "27035963", "url": "https://pubmed.ncbi.nlm.nih.gov/27035963" }, { "database": "PubMed", "id": "19667202", "url": "https://pubmed.ncbi.nlm.nih.gov/19667202" } ], "uniprot_canonical_ac": "P97438-1" } ], "record_id": "pubmed.27035963", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mixing and matching TREK/TRAAK subunits generate heterodimeric K2P channels with unique properties.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2016-04-12", "authors": "Blin Sandy, Ben Soussia Ismail, Kim Eun-Jin, Brau Fr\u00e9d\u00e9ric, Kang Dawon, Lesage Florian, Bichet Delphine", "reference": { "type": "PubMed", "id": "27035965", "url": "https://pubmed.ncbi.nlm.nih.gov/27035965" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BUW1-1", "protein_name": "Potassium channel subfamily K member 10", "gene_name": "Kcnk10", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O88454-1", "protein_name": "Potassium channel subfamily K member 4", "gene_name": "Kcnk4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P97438-1", "protein_name": "Potassium channel subfamily K member 2", "gene_name": "Kcnk2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BUW1", "url": "https://www.uniprot.org/uniprotkb/Q8BUW1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 135, "end_pos": 135, "sequence_org": "G", "sequence_mut": "I", "comment": "Confers resistance to ruthenium red.", "evidence": [ { "database": "UniProtKB", "id": "Q8BUW1", "url": "https://www.uniprot.org/uniprotkb/Q8BUW1" }, { "database": "PubMed", "id": "27035965", "url": "https://pubmed.ncbi.nlm.nih.gov/27035965" } ], "uniprot_canonical_ac": "Q8BUW1-1" }, { "start_pos": 106, "end_pos": 106, "sequence_org": "G", "sequence_mut": "E", "comment": "Decreased channel conductance. Acts as a dominant negative when it assembles with the wild-type subunit. Inactivates KCNK2, KCNK10, and KCNK4 currents by 49%, 32% and 57% respectively. 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "TRESK and TREK-2 two-pore-domain potassium channel subunits form functional heterodimers in primary somatosensory neurons.", "journal": "The Journal of biological chemistry", "date": "2020", "authors": "Lengyel M, Czirjak G, Jacobson DA, Enyedi P", "reference": { "type": "PubMed", "id": "32641496", "url": "https://pubmed.ncbi.nlm.nih.gov/32641496" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BUW1-1", "protein_name": "Potassium channel subfamily K member 10", "gene_name": "Kcnk10", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6VV64-1", "protein_name": "Potassium channel subfamily K member 18", "gene_name": "Kcnk18", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BUW1", "url": "https://www.uniprot.org/uniprotkb/Q8BUW1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 131, "end_pos": 131, "sequence_org": "G", "sequence_mut": "E", "comment": "Acts as a dominant negative on wild-type KCNK18 or KCNK10 subunits.", "evidence": [ { "database": 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No effect on channel conductance.", "evidence": [ { "database": "UniProtKB", "id": "Q6VV64", "url": "https://www.uniprot.org/uniprotkb/Q6VV64" }, { "database": "PubMed", "id": "18397886", "url": "https://pubmed.ncbi.nlm.nih.gov/18397886" }, { "database": "PubMed", "id": "32641496", "url": "https://pubmed.ncbi.nlm.nih.gov/32641496" } ], "uniprot_canonical_ac": "Q6VV64-1" }, { "start_pos": 264, "end_pos": 264, "sequence_org": "S", "sequence_mut": "E", "comment": "Further decreases the open probability of the channel, without affecting the single channel conductance; when associated with E-276.", "evidence": [ { "database": "UniProtKB", "id": "Q6VV64", "url": "https://www.uniprot.org/uniprotkb/Q6VV64" }, { "database": "PubMed", "id": "32641496", "url": "https://pubmed.ncbi.nlm.nih.gov/32641496" } ], "uniprot_canonical_ac": "Q6VV64-1" }, { "start_pos": 276, "end_pos": 276, "sequence_org": "S", "sequence_mut": "A", "comment": "Increases the open probability of the channel, without affecting the single channel conductance. Confers resistance to stimulation by calcineurin. 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"total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "\u03b2-COP Suppresses the Surface Expression of the TREK2.", "journal": "Cells", "date": "2023-05-29", "authors": "Kim Seong-Seop, Park Jimin, Kim Eunju, Hwang Eun Mi, Park Jae-Yong", "reference": { "type": "PubMed", "id": "37296621", "url": "https://pubmed.ncbi.nlm.nih.gov/37296621" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BUW1-1", "protein_name": "Potassium channel subfamily K member 10", "gene_name": "Kcnk10", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O55029-1", "protein_name": "Coatomer subunit beta'", "gene_name": "Copb2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P35606-1", "protein_name": "Coatomer subunit beta'", "gene_name": "COPB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57789-1", "protein_name": "Potassium channel subfamily K member 10", "gene_name": "KCNK10", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BUW1", "url": "https://www.uniprot.org/uniprotkb/Q8BUW1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.37296621", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Natural Spleen Cell Ligandome in Transporter Antigen Processing-Deficient Mice.", "journal": "Journal of proteome research", "date": "2019-09-06", "authors": "Lorente Elena, Palomo Concepci\u00f3n, Barnea Eilon, Mir Carmen, Del Val Margarita, Admon Arie, L\u00f3pez Daniel", "reference": { "type": "PubMed", "id": "31361958", "url": "https://pubmed.ncbi.nlm.nih.gov/31361958" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "E9Q2E4-1", "protein_name": "HECT domain E3 ubiquitin protein ligase 4", "gene_name": "Hectd4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P97351-1", "protein_name": "Small ribosomal subunit protein eS1", "gene_name": "Rps3a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q80U30-1", "protein_name": "Protein CLEC16A", "gene_name": "Clec16a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D2G2-1", "protein_name": "Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial", "gene_name": "Dlst", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P62852-1", "protein_name": "Small ribosomal subunit protein eS25", "gene_name": "Rps25", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q03391-1", "protein_name": "Glutamate receptor ionotropic, NMDA 2D", "gene_name": "Grin2d", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P07724-1", "protein_name": "Albumin", "gene_name": "Alb", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P24270-1", "protein_name": "Catalase", "gene_name": "Cat", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6ZWV7-1", "protein_name": "Large ribosomal subunit protein uL29", "gene_name": "Rpl35", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q762D5-1", "protein_name": "Nucleotide sugar transporter SLC35D2", "gene_name": "Slc35d2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P84104-1", "protein_name": "Serine/arginine-rich splicing factor 3", "gene_name": "Srsf3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P09813-1", "protein_name": "Apolipoprotein A-II", "gene_name": "Apoa2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VDP4-1", "protein_name": "Cell cycle and apoptosis regulator protein 2", "gene_name": "Ccar2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q91X72-1", "protein_name": "Hemopexin", "gene_name": "Hpx", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q61805-1", "protein_name": "Lipopolysaccharide-binding protein", "gene_name": "Lbp", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P62751-1", "protein_name": "Large ribosomal subunit protein uL23", "gene_name": "Rpl23a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8QZT1-1", "protein_name": "Acetyl-CoA acetyltransferase, mitochondrial", "gene_name": "Acat1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q64152-1", "protein_name": "Transcription factor BTF3", "gene_name": "Btf3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VHF2-1", "protein_name": "Cadherin-related family member 5", "gene_name": "Cdhr5", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D0E1-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein M", "gene_name": "Hnrnpm", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BH43-1", "protein_name": "Actin-binding protein WASF2", "gene_name": "Wasf2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D906-1", "protein_name": "Ubiquitin-like modifier-activating enzyme ATG7", "gene_name": "Atg7", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P98064-1", "protein_name": "Mannan-binding lectin serine protease 1", "gene_name": "Masp1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q61838-1", "protein_name": "Pregnancy zone protein", "gene_name": "Pzp2; Pzp", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CFD4-1", "protein_name": "Sorting nexin-8", "gene_name": "Snx8", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q61937-1", "protein_name": "Nucleophosmin", "gene_name": "Npm1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CD10-1", "protein_name": "Calcium uptake protein 2, mitochondrial", "gene_name": "Micu2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CXZ1-1", "protein_name": "NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial", "gene_name": "Ndufs4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P48771-1", "protein_name": "Cytochrome c oxidase subunit 7A2, mitochondrial", "gene_name": "Cox7a2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "A2AKB9-1", "protein_name": "DDB1- and CUL4-associated factor 10", "gene_name": "Dcaf10", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6PDK2-1", "protein_name": "Histone-lysine N-methyltransferase 2D", "gene_name": "Kmt2d", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q62261-1", "protein_name": "Spectrin beta chain, non-erythrocytic 1", "gene_name": "Sptbn1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Z2D3-1", "protein_name": "Gasdermin-E", "gene_name": "Gsdme", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6TAW2-1", "protein_name": "Stress-associated endoplasmic reticulum protein 2", "gene_name": "Serp2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P10711-1", "protein_name": "Transcription elongation factor A protein 1", "gene_name": "Tcea1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9WVA4-1", "protein_name": "Transgelin-2", "gene_name": "Tagln2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O08717-1", "protein_name": "Inhibin beta E chain", "gene_name": "Inhbe", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "E9Q2E4", "url": "https://www.uniprot.org/uniprotkb/E9Q2E4" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.31361958", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 37 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Fer1l6 is essential for the development of vertebrate muscle tissue in zebrafish.", "journal": "Mol. Biol. Cell", "date": "2019", "authors": "Bonventre Josephine A, Holman Chelsea, Manchanda Aayushi, Codding Sara J, Chau Trisha, Huegel Jacob, Barton Carrie, Tanguay Robert, Johnson Colin P", "reference": { "type": "PubMed", "id": "30516436", "url": "https://pubmed.ncbi.nlm.nih.gov/30516436" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "E0CZ42-1", "protein_name": "Fer-1-like protein 6", "gene_name": "Fer1l6", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q64727-1", "protein_name": "Vinculin", "gene_name": "Vcl", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P70452-1", "protein_name": "Syntaxin-4", "gene_name": "Stx4a; Stx4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "A0AB32U070-1", "protein_name": "Myoferlin isoform X1", "gene_name": "myof", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AB32U2W5-1", "protein_name": "Fer-1-like protein 6", "gene_name": "fer1l6", "tax_name": "Zebrafish" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "E0CZ42", "url": "https://www.uniprot.org/uniprotkb/E0CZ42" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.30516436", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Loss of hepatic SMLR1 causes hepatosteatosis and protects against atherosclerosis due to decreased hepatic VLDL secretion.", "journal": "Hepatology (Baltimore, Md.)", "date": "2023-11-01", "authors": "van Zwol Willemien, Rimbert Antoine, Wolters Justina C, Smit Marieke, Bloks Vincent W, Kloosterhuis Niels J, Huijkman Nicolette C A, Koster Mirjam H, Tharehalli Umesh, de Neck Simon M, Bournez Colin, Fuh Marceline M, Kuipers Jeroen, Rajan Sujith, de Bruin Alain, Ginsberg Henry N, van Westen Gerard J P, Hussain M Mahmood, Scheja Ludger, Heeren Joerg, Zimmerman Philip, van de Sluis Bart, Kuivenhoven Jan Albert", "reference": { "type": "PubMed", "id": "36053190", "url": "https://pubmed.ncbi.nlm.nih.gov/36053190" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "J3QMJ4-1", "protein_name": "Small leucine-rich protein 1", "gene_name": "Smlr1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "H3BR10-1", "protein_name": "Small leucine-rich 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developmental biology", "date": "2021", "authors": "Li Yinchuan, Mi Panpan, Chen Xue, Wu Jiabao, Liu Xiaohua, Tang Yunge, Cheng Jinmei, Huang Yingying, Qin Weibing, Cheng C Yan, Sun Fei", "reference": { "type": "PubMed", "id": "34733855", "url": "https://pubmed.ncbi.nlm.nih.gov/34733855" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A2AFS9-1", "protein_name": "Testis-expressed protein 13A", "gene_name": "Tex13a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6ZQ08-1", "protein_name": "CCR4-NOT transcription complex subunit 1", "gene_name": "Cnot1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "A2AFS9", "url": "https://www.uniprot.org/uniprotkb/A2AFS9" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.34733855", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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Cell", "date": "2011", "authors": "Diering GH, Mills F, Bamji SX, Numata M", "reference": { "type": "PubMed", "id": "21551074", "url": "https://pubmed.ncbi.nlm.nih.gov/21551074" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "B2RXE2-1", "protein_name": "Sodium/hydrogen exchanger 5", "gene_name": "Slc9a5", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q14940-1", "protein_name": "Sodium/hydrogen exchanger 5", "gene_name": "SLC9A5", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "B2RXE2", "url": "https://www.uniprot.org/uniprotkb/B2RXE2" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.21551074", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 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via upregulating Bdnf/TrkB signaling in mice.", "journal": "Am. J. Med. Genet. B Neuropsychiatr. 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T, Nagarajan UM", "reference": { "type": "PubMed", "id": "34125599", "url": "https://pubmed.ncbi.nlm.nih.gov/34125599" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9JKE1-1", "protein_name": "Triggering receptor expressed on myeloid cells 3", "gene_name": "Trem3", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9JKE1", "url": "https://www.uniprot.org/uniprotkb/Q9JKE1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.34125599", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", 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} ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P21995", "url": "https://www.uniprot.org/uniprotkb/P21995" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.19164284", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The mouse C2C12 myoblast cell surface N-linked glycoproteome: identification, glycosite occupancy, and membrane orientation.", "journal": "Molecular & cellular proteomics : MCP", "date": "2009", "authors": "Gundry RL, Raginski K, Tarasova Y, Tchernyshyov I, Bausch-Fluck D, Elliott ST, Boheler KR, Van Eyk JE, Wollscheid B", "reference": { "type": "PubMed", "id": "19656770", "url": "https://pubmed.ncbi.nlm.nih.gov/19656770" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P21995-1", "protein_name": "Embigin", "gene_name": "Emb", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q60751-1", "protein_name": "Insulin-like growth factor 1 receptor", "gene_name": "Igf1r", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R373-1", "protein_name": "CXADR-like membrane protein", "gene_name": "Clmp", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q62470-1", "protein_name": "Integrin 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"tax_name": "Mouse" }, { "uniprot_canonical_ac": "P97333-1", "protein_name": "Neuropilin-1", "gene_name": "Nrp1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P11688-1", "protein_name": "Integrin alpha-5", "gene_name": "Itga5", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P10852-1", "protein_name": "Amino acid transporter heavy chain SLC3A2", "gene_name": "Slc3a2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P97449-1", "protein_name": "Aminopeptidase N", "gene_name": "Anpep", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P61622-1", "protein_name": "Integrin alpha-11", "gene_name": "Itga11", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q61738-1", "protein_name": "Integrin alpha-7", "gene_name": "Itga7", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q64449-1", "protein_name": "C-type mannose receptor 2", "gene_name": "Mrc2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O35874-1", "protein_name": "Neutral amino acid transporter A", "gene_name": "Slc1a4", 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phosphorylated tyrosine residues within EphA2 receptor tyrosine kinase.", "journal": "The Journal of biological chemistry", "date": "2008", "authors": "Fang WB, Brantley-Sieders DM, Hwang Y, Ham AJ, Chen J", "reference": { "type": "PubMed", "id": "18387945", "url": "https://pubmed.ncbi.nlm.nih.gov/18387945" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P52793-1", "protein_name": "Ephrin-A1", "gene_name": "Efna1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q03145-1", "protein_name": "Ephrin type-A receptor 2", "gene_name": "Epha2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P29317-1", "protein_name": "Ephrin type-A receptor 2", "gene_name": "EPHA2", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P52793", "url": "https://www.uniprot.org/uniprotkb/P52793" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 589, "end_pos": 589, "sequence_org": "Y", "sequence_mut": "E", "comment": "No significant effect on kinase activity and loss of binding to VAV2 and VAV3. 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ligands for Eph-related receptor tyrosine kinases during mouse embryogenesis.", "journal": "Dev. Biol.", "date": "1996", "authors": "Flenniken A M, Gale N W, Yancopoulos G D, Wilkinson D G", "reference": { "type": "PubMed", "id": "8903354", "url": "https://pubmed.ncbi.nlm.nih.gov/8903354" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P52793-1", "protein_name": "Ephrin-A1", "gene_name": "Efna1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O08542-1", "protein_name": "Ephrin-A4", "gene_name": "Efna4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O08545-1", "protein_name": "Ephrin-A3", "gene_name": "Efna3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O08543-1", "protein_name": "Ephrin-A5", "gene_name": "Efna5", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P52793", "url": "https://www.uniprot.org/uniprotkb/P52793" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.8903354", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Lipopolysaccharide-induced methylation of HuR, an mRNA-stabilizing protein, by CARM1. 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"https://pubmed.ncbi.nlm.nih.gov/23181695" }, { "database": "PubMed", "id": "32368295", "url": "https://pubmed.ncbi.nlm.nih.gov/32368295" } ], "site_lbl": "Tyr594", "uniprot_canonical_ac": "P54762-1" } ], "record_id": "pubmed.9430661", "abstract": "", "glycosylation": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PDZ proteins bind, cluster, and synaptically colocalize with Eph receptors and their ephrin ligands.", "journal": "Neuron", "date": "1998", "authors": "Torres R, Firestein BL, Dong H, Staudinger J, Olson EN, Huganir RL, Bredt DS, Gale NW, Yancopoulos GD", "reference": { "type": "PubMed", "id": "9883737", "url": "https://pubmed.ncbi.nlm.nih.gov/9883737" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8CBF3-1", "protein_name": "Ephrin type-B receptor 1", "gene_name": "Ephb1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q62083-1", "protein_name": "PRKCA-binding protein", "gene_name": "Pick1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P54763-3", "protein_name": "Ephrin type-B receptor 2", "gene_name": "Ephb2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q925T6-1", "protein_name": "Glutamate receptor-interacting protein 1", "gene_name": "Grip1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q61772-1", "protein_name": "Ephrin type-A receptor 7", "gene_name": "Epha7", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O00560-1", "protein_name": "Syntenin-1", "gene_name": "SDCBP", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8CBF3", "url": "https://www.uniprot.org/uniprotkb/Q8CBF3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.9883737", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ring1b-mediated H2A ubiquitination associates with inactive X chromosomes and is involved in initiation of X inactivation.", "journal": "The Journal of biological chemistry", "date": "2004", "authors": "Fang J, Chen T, Chadwick B, Li E, Zhang Y", "reference": { "type": "PubMed", "id": "15509584", "url": "https://pubmed.ncbi.nlm.nih.gov/15509584" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "C0HKE2-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2ac6", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q64522-1", "protein_name": "Histone H2A type 2-B", "gene_name": "H2ac21", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE1-1", "protein_name": "Histone H2A type 1-B", "gene_name": "H2ac4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE3-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2ac7", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE4-1", "protein_name": "Histone H2A type 1-E", "gene_name": "H2ac8", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE6-1", "protein_name": "Histone H2A type 1-I", "gene_name": "H2ac13", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE9-1", "protein_name": "Histone H2A type 1-P", "gene_name": "Hist1h2ap", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q64523-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2ac20", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BFU2-1", "protein_name": "Histone H2A type 3", "gene_name": "H2ac25", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CGP7-1", "protein_name": "Histone H2A type 1-K", "gene_name": "H2ac15", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE5-1", "protein_name": "Histone H2A type 1-G", "gene_name": "H2ac11", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE7-1", "protein_name": "Histone H2A type 1-N", "gene_name": "Hist1h2an", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE8-1", "protein_name": "Histone H2A type 1-O", "gene_name": "Hist1h2ao", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6GSS7-1", "protein_name": "Histone H2A type 2-A", "gene_name": "Hist2h2aa1; Hist2h2aa2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CGP5-1", "protein_name": "Histone H2A type 1-F", "gene_name": "Hist1h2af", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CGP6-1", "protein_name": "Histone H2A type 1-H", "gene_name": "H2ac12", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CQJ4-1", "protein_name": "E3 ubiquitin-protein ligase RING2", "gene_name": "Rnf2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "C0HKE2", "url": "https://www.uniprot.org/uniprotkb/C0HKE2" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15509584", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 17 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Polycomb group proteins Ring1A/B link ubiquitylation of histone H2A to heritable gene silencing and X inactivation.", "journal": "Developmental cell", "date": "2004", "authors": "de Napoles M, Mermoud JE, Wakao R, Tang YA, Endoh M, Appanah R, Nesterova TB, Silva J, Otte AP, Vidal M, Koseki H, Brockdorff N", "reference": { "type": "PubMed", "id": "15525528", "url": "https://pubmed.ncbi.nlm.nih.gov/15525528" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "C0HKE2-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2ac6", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q64522-1", "protein_name": "Histone H2A type 2-B", "gene_name": "H2ac21", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O35730-1", "protein_name": "E3 ubiquitin-protein ligase RING1", "gene_name": "Ring1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q921Q7-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "Rin1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE1-1", "protein_name": "Histone H2A type 1-B", "gene_name": "H2ac4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE3-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2ac7", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE4-1", "protein_name": "Histone H2A type 1-E", "gene_name": "H2ac8", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE6-1", "protein_name": "Histone H2A type 1-I", "gene_name": "H2ac13", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE9-1", "protein_name": "Histone H2A type 1-P", "gene_name": "Hist1h2ap", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q64523-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2ac20", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BFU2-1", "protein_name": "Histone H2A type 3", "gene_name": "H2ac25", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CGP7-1", "protein_name": "Histone H2A type 1-K", "gene_name": "H2ac15", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE5-1", "protein_name": "Histone H2A type 1-G", "gene_name": "H2ac11", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE7-1", "protein_name": "Histone H2A type 1-N", "gene_name": "Hist1h2an", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE8-1", "protein_name": "Histone H2A type 1-O", "gene_name": "Hist1h2ao", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6GSS7-1", "protein_name": "Histone H2A type 2-A", "gene_name": "Hist2h2aa1; Hist2h2aa2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CGP5-1", "protein_name": "Histone H2A type 1-F", "gene_name": "Hist1h2af", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CGP6-1", "protein_name": "Histone H2A type 1-H", "gene_name": "H2ac12", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CQJ4-1", "protein_name": "E3 ubiquitin-protein ligase RING2", "gene_name": "Rnf2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "C0HKE2", "url": "https://www.uniprot.org/uniprotkb/C0HKE2" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15525528", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 19 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Blimp1 associates with Prmt5 and directs histone arginine methylation in mouse germ cells.", "journal": "Nature cell biology", "date": "2006", "authors": "Ancelin K, Lange UC, Hajkova P, Schneider R, Bannister AJ, Kouzarides T, Surani MA", "reference": { "type": "PubMed", "id": "16699504", "url": "https://pubmed.ncbi.nlm.nih.gov/16699504" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "C0HKE2-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2ac6", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CIG8-1", "protein_name": "Protein arginine N-methyltransferase 5", "gene_name": "Prmt5", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q64522-1", "protein_name": "Histone H2A type 2-B", "gene_name": "H2ac21", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P62806-1", "protein_name": "Histone H4", "gene_name": "H4c11; H4c12; H4c14; H4c16; H4c1; H4c2; H4c3; H4c4; H4c6; H4c8; H4c9; Hist1h4m", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE1-1", "protein_name": "Histone H2A type 1-B", "gene_name": "H2ac4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE3-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2ac7", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q60636-1", "protein_name": "PR domain zinc finger protein 1", "gene_name": "Prdm1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE4-1", "protein_name": "Histone H2A type 1-E", "gene_name": "H2ac8", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE6-1", "protein_name": "Histone H2A type 1-I", "gene_name": "H2ac13", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE9-1", "protein_name": "Histone H2A type 1-P", "gene_name": "Hist1h2ap", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q64523-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2ac20", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BFU2-1", "protein_name": "Histone H2A type 3", "gene_name": "H2ac25", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CGP7-1", "protein_name": "Histone H2A type 1-K", "gene_name": "H2ac15", "tax_name": "Mouse" }, { "uniprot_canonical_ac": 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[10090]" } ], "record_id": "pubmed.16699504", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 19 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Glutamine methylation in histone H2A is an RNA-polymerase-I-dedicated modification.", "journal": "Nature", "date": "2014", "authors": "Tessarz P, Santos-Rosa H, Robson SC, Sylvestersen KB, Nelson CJ, Nielsen ML, Kouzarides T", "reference": { "type": "PubMed", "id": "24352239", "url": "https://pubmed.ncbi.nlm.nih.gov/24352239" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "C0HKE2-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2ac6", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q64522-1", "protein_name": "Histone H2A type 2-B", "gene_name": "H2ac21", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P22087-1", "protein_name": "rRNA 2'-O-methyltransferase fibrillarin", "gene_name": "FBL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C0S8-1", "protein_name": "Histone H2A type 1", "gene_name": "H2AC11; H2AC13; H2AC15; H2AC16; H2AC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "C0HKE1-1", "protein_name": "Histone H2A type 1-B", "gene_name": "H2ac4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE3-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2ac7", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KK5-1", "protein_name": "Histone H2A type 1-H", "gene_name": "H2AC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L7L0-1", "protein_name": "Histone H2A type 3", "gene_name": "H2AC25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUE6-1", "protein_name": "Histone H2A type 2-B", "gene_name": "H2AC21", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"uniprot_canonical_ac": "Q64523-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2ac20", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BFU2-1", "protein_name": "Histone H2A type 3", "gene_name": "H2ac25", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CGP7-1", "protein_name": "Histone H2A type 1-K", "gene_name": "H2ac15", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE5-1", "protein_name": "Histone H2A type 1-G", "gene_name": "H2ac11", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE7-1", "protein_name": "Histone H2A type 1-N", "gene_name": "Hist1h2an", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE8-1", "protein_name": "Histone H2A type 1-O", "gene_name": "Hist1h2ao", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6GSS7-1", "protein_name": "Histone H2A type 2-A", "gene_name": "Hist2h2aa1; Hist2h2aa2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CGP5-1", "protein_name": "Histone H2A type 1-F", "gene_name": "Hist1h2af", 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"sequence_org": "A", "sequence_mut": "V", "comment": "In nop1.3; thermosensitive allele showing a decrease in histone-glutamine N-methyltransferase activity upon shift to restrictive temperature; when associated with D-87; G-103 and S-219.", "evidence": [ { "database": "UniProtKB", "id": "P15646", "url": "https://www.uniprot.org/uniprotkb/P15646" }, { "database": "PubMed", "id": "24352239", "url": "https://pubmed.ncbi.nlm.nih.gov/24352239" } ], "uniprot_canonical_ac": "P15646-1" }, { "start_pos": 219, "end_pos": 219, "sequence_org": "P", "sequence_mut": "S", "comment": "In nop1.3; thermosensitive allele showing a decrease in histone-glutamine N-methyltransferase activity upon shift to restrictive temperature; when associated with D-87; G-103 and V-175.", "evidence": [ { "database": "UniProtKB", "id": "P15646", "url": "https://www.uniprot.org/uniprotkb/P15646" }, { "database": "PubMed", "id": "24352239", "url": "https://pubmed.ncbi.nlm.nih.gov/24352239" } ], "uniprot_canonical_ac": 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H2A acetylation and phosphorylation.", "journal": "The Journal of biological chemistry", "date": "1981", "authors": "Pantazis P, Bonner WM", "reference": { "type": "PubMed", "id": "7217105", "url": "https://pubmed.ncbi.nlm.nih.gov/7217105" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "C0HKE2-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2ac6", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P27661-1", "protein_name": "Histone H2AX", "gene_name": "H2ax", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P0C0S6-1", "protein_name": "Histone H2A.Z", "gene_name": "H2az1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE1-1", "protein_name": "Histone H2A type 1-B", "gene_name": "H2ac4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE3-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2ac7", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKE4-1", "protein_name": "Histone H2A type 1-E", "gene_name": "H2ac8", 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