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gene expression to promote breast tumour growth and metastasis.", "journal": "Nature", "date": "2008-03-13", "authors": "Han Hye-Jung, Russo Jose, Kohwi Yoshinori, Kohwi-Shigematsu Terumi", "reference": { "type": "PubMed", "id": "18337816", "url": "https://pubmed.ncbi.nlm.nih.gov/18337816" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q01826-1", "protein_name": "DNA-binding protein SATB1", "gene_name": "SATB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q01826", "url": "https://www.uniprot.org/uniprotkb/Q01826" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18337816", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": 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Ben-Zeev B, Bonagura VR, Bruel AL, Brunet T, Brunner HG, Chew HB, Chrast J, Cimbalistiene L, Coon H, Delot EC, Demurger F, Denomme-Pichon AS, Depienne C, Donnai D, Dyment DA, Elpeleg O, Faivre L, Gilissen C, Granger L, Haber B, Hachiya Y, Abedi YH, Hanebeck J, Hehir-Kwa JY, Horist B, Itai T, Jackson A, Jewell R, Jones KL, Joss S, Kashii H, Kato M, Kattentidt-Mouravieva AA, Kok F, Kotzaeridou U, Krishnamurthy V, Kucinskas V, Kuechler A, Lavillaureix A, Liu P, Manwaring L, Matsumoto N, Mazel B, McWalter K, Meiner V, Mikati MA, Miyatake S, Mizuguchi T, Moey LH, Mohammed S, Mor-Shaked H, Mountford H, Newbury-Ecob R, Odent S, Orec L, Osmond M, Palculict TB, Parker M, Petersen AK, Pfundt R, Preiksaitiene E, Radtke K, Ranza E, Rosenfeld JA, Santiago-Sim T, Schwager C, Sinnema M, Snijders Blok L, Spillmann RC, Stegmann APA, Thiffault I, Tran L, Vaknin-Dembinsky A, Vedovato-Dos-Santos JH, Schrier Vergano SA, Vilain E, Vitobello A, Wagner M, Waheeb A, Willing M, Zuccarelli B, Kini U, Newbury DF, Kleefstra T, Reymond A, Fisher SE, Vissers LELM", "reference": { "type": "PubMed", "id": "33513338", "url": "https://pubmed.ncbi.nlm.nih.gov/33513338" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q01826-1", "protein_name": "DNA-binding protein SATB1", "gene_name": "SATB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q01826", "url": "https://www.uniprot.org/uniprotkb/Q01826" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.33513338", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": 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Expression and Prognostic Value in Croatian Hodgkin Lymphoma Patients: A Unicentric Study.", "journal": "Cells", "date": "2024-08-08", "authors": "Viceli\u0107 \u010cutura Lu\u010dana, Vuj\u010di\u0107 Milan, Galu\u0161i\u0107 Davor, Blaslov Viktor, Petri\u0107 Marija, Miljak Antonija, Lozi\u0107 Mirela, Benzon Benjamin, Vukojevi\u0107 Katarina, Bubi\u0107 Toni, Kunac Nenad, Zja\u010di\u0107 Puljiz Danijela, Deli\u0107 Juki\u0107 Ivana Kristina, Kri\u017eanac Marinela, Lozi\u0107 Bernarda", "reference": { "type": "PubMed", "id": "39195213", "url": "https://pubmed.ncbi.nlm.nih.gov/39195213" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q01826-1", "protein_name": "DNA-binding protein SATB1", "gene_name": "SATB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q01826", "url": "https://www.uniprot.org/uniprotkb/Q01826" } ], "common_name": "Human", "glygen_name": "Human", 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Diego Di Felipe \u00c1vila, Pantoja Karla Beatriz Cardias Cereja, Fernandes Marianne Rodrigues, Bentes L\u00edvia Guerreiro de Barros, Pimentel Ant\u00f4nio Leonardo Jatahi Cavalcanti, Lemos Rafael Silva, Almeida Nyara Rodrigues Conde de, Fernandes Manuela Rodrigues Neiva, da Cruz Thiago Sequeira, Candido Atylla de Andrade, Burbano Rommel Mario Rodriguez", "reference": { "type": "PubMed", "id": "36833294", "url": "https://pubmed.ncbi.nlm.nih.gov/36833294" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UHR5-1", "protein_name": "SAP30-binding protein", "gene_name": "SAP30BP", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UHR5", "url": "https://www.uniprot.org/uniprotkb/Q9UHR5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.36833294", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": 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J. Biochem.", "date": "1987", "authors": "Chu M L, Mann K, Deutzmann R, Pribula-Conway D, Hsu-Chen C C, Bernard M P, Timpl R", "reference": { "type": "PubMed", "id": "3665927", "url": "https://pubmed.ncbi.nlm.nih.gov/3665927" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P12110-1", "protein_name": "Collagen alpha-2(VI) chain", "gene_name": "COL6A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12111-1", "protein_name": "Collagen alpha-3(VI) chain", "gene_name": "COL6A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12109-1", "protein_name": "Collagen alpha-1(VI) chain", "gene_name": "COL6A1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P12110", "url": "https://www.uniprot.org/uniprotkb/P12110" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.3665927", "abstract": "", "glycosylation": [], 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Jurklies B, Schuster A, Zrenner E, Wissinger B, Lennon A, Shu X, Cideciyan AV, Stone EM, Jacobson SG, Swaroop A", "reference": { "type": "PubMed", "id": "15459973", "url": "https://pubmed.ncbi.nlm.nih.gov/15459973" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y5X4-1", "protein_name": "Photoreceptor-specific nuclear receptor", "gene_name": "NR2E3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y5X4", "url": "https://www.uniprot.org/uniprotkb/Q9Y5X4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15459973", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Novel NR2E3 mutations (R104Q, R334G) associated with a mild form of enhanced S-cone syndrome demonstrate compound heterozygosity.", "journal": "Ophthalmology", "date": "2005", "authors": "Hayashi T, Gekka T, Goto-Omoto S, Takeuchi T, Kubo A, Kitahara K", "reference": { "type": "PubMed", "id": "16225923", "url": "https://pubmed.ncbi.nlm.nih.gov/16225923" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y5X4-1", "protein_name": "Photoreceptor-specific nuclear receptor", "gene_name": "NR2E3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y5X4", "url": "https://www.uniprot.org/uniprotkb/Q9Y5X4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16225923", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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cause dominant or recessive retinal degenerations in the same family.", "journal": "Human mutation", "date": "2009", "authors": "Escher P, Gouras P, Roduit R, Tiab L, Bolay S, Delarive T, Chen S, Tsai CC, Hayashi M, Zernant J, Merriam JE, Mermod N, Allikmets R, Munier FL, Schorderet DF", "reference": { "type": "PubMed", "id": "19006237", "url": "https://pubmed.ncbi.nlm.nih.gov/19006237" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y5X4-1", "protein_name": "Photoreceptor-specific nuclear receptor", "gene_name": "NR2E3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y5X4", "url": "https://www.uniprot.org/uniprotkb/Q9Y5X4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19006237", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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J. Cancer", "date": "2001", "authors": "Harada K, Yamada A, Yang D, Itoh K, Shichijo S", "reference": { "type": "PubMed", "id": "11477570", "url": "https://pubmed.ncbi.nlm.nih.gov/11477570" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q15287-1", "protein_name": "RNA-binding protein with serine-rich domain 1", "gene_name": "RNPS1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q15287", "url": "https://www.uniprot.org/uniprotkb/Q15287" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11477570", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Activation of pre-mRNA splicing by human RNPS1 is regulated by CK2 phosphorylation.", "journal": "Molecular and cellular biology", "date": "2005", "authors": "Trembley JH, Tatsumi S, Sakashita E, Loyer P, Slaughter CA, Suzuki H, Endo H, Kidd VJ, Mayeda A", "reference": { "type": "PubMed", "id": "15684395", "url": "https://pubmed.ncbi.nlm.nih.gov/15684395" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q15287-1", "protein_name": "RNA-binding protein with serine-rich domain 1", "gene_name": "RNPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68400-1", "protein_name": "Casein kinase II subunit alpha", "gene_name": "CSNK2A1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q15287", "url": "https://www.uniprot.org/uniprotkb/Q15287" 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Cell Sci.", "date": "1998", "authors": "Loyer P, Trembley J H, Lahti J M, Kidd V J", "reference": { "type": "PubMed", "id": "9580558", "url": "https://pubmed.ncbi.nlm.nih.gov/9580558" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q15287-1", "protein_name": "RNA-binding protein with serine-rich domain 1", "gene_name": "RNPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21127-1", "protein_name": "Cyclin-dependent kinase 11B", "gene_name": "CDK11B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q15287", "url": "https://www.uniprot.org/uniprotkb/Q15287" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9580558", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { 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Genet.", "date": "1999", "authors": "Settasatian C, Whitmore S A, Crawford J, Bilton R L, Cleton-Jansen A M, Sutherland G R, Callen D F", "reference": { "type": "PubMed", "id": "10480368", "url": "https://pubmed.ncbi.nlm.nih.gov/10480368" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UQ90-1", "protein_name": "Mitochondrial inner membrane m-AAA protease component paraplegin", "gene_name": "SPG7", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UQ90", "url": "https://www.uniprot.org/uniprotkb/Q9UQ90" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10480368", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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[] } ] }, { "title": "A novel form of autosomal recessive hereditary spastic paraplegia caused by a new SPG7 mutation.", "journal": "Neurology", "date": "2007", "authors": "Warnecke T, Duning T, Schwan A, Lohmann H, Epplen JT, Young P", "reference": { "type": "PubMed", "id": "17646629", "url": "https://pubmed.ncbi.nlm.nih.gov/17646629" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UQ90-1", "protein_name": "Mitochondrial inner membrane m-AAA protease component paraplegin", "gene_name": "SPG7", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UQ90", "url": "https://www.uniprot.org/uniprotkb/Q9UQ90" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17646629", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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OXPHOS impairment caused by mutations in paraplegin, a nuclear-encoded mitochondrial metalloprotease.", "journal": "Cell", "date": "1998-06-12", "authors": "Casari G, De Fusco M, Ciarmatori S, Zeviani M, Mora M, Fernandez P, De Michele G, Filla A, Cocozza S, Marconi R, D\u00fcrr A, Fontaine B, Ballabio A", "reference": { "type": "PubMed", "id": "9635427", "url": "https://pubmed.ncbi.nlm.nih.gov/9635427" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UQ90-1", "protein_name": "Mitochondrial inner membrane m-AAA protease component paraplegin", "gene_name": "SPG7", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UQ90", "url": "https://www.uniprot.org/uniprotkb/Q9UQ90" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9635427", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "RNA-binding domain of the A protein component of the U1 small nuclear ribonucleoprotein analyzed by NMR spectroscopy 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Natl. Acad. Sci. U.S.A.", "date": "1991", "authors": "Hoffman D W, Query C C, Golden B L, White S W, Keene J D", "reference": { "type": "PubMed", "id": "1826055", "url": "https://pubmed.ncbi.nlm.nih.gov/1826055" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P09012-1", "protein_name": "U1 small nuclear ribonucleoprotein A", "gene_name": "SNRPA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P09012", "url": "https://www.uniprot.org/uniprotkb/P09012" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1826055", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]