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carcinoma].", "journal": "Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology", "date": "2024-02-20", "authors": "Yang J L, Fang R F, Xie Q, Tai B J, Yao D F, Yao M", "reference": { "type": "PubMed", "id": "38514264", "url": "https://pubmed.ncbi.nlm.nih.gov/38514264" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NNX1-1", "protein_name": "Tuftelin", "gene_name": "TUFT1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NNX1", "url": "https://www.uniprot.org/uniprotkb/Q9NNX1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38514264", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"HSPB7 oppositely regulates human mesenchymal stromal cell-derived osteogenesis and adipogenesis.", "journal": "Stem cell research & therapy", "date": "2023-05-11", "authors": "Zhang Shuang, van de Peppel Jeroen, Koedam Marijke, van Leeuwen Johannes P T M, van der Eerden Bram C J", "reference": { "type": "PubMed", "id": "37170285", "url": "https://pubmed.ncbi.nlm.nih.gov/37170285" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UBY9-1", "protein_name": "Heat shock protein beta-7", "gene_name": "HSPB7", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UBY9", "url": "https://www.uniprot.org/uniprotkb/Q9UBY9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.37170285", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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"2018", "authors": "Uusimaa J, Kaarteenaho R, Paakkola T, Tuominen H, Karjalainen MK, Nadaf J, Varilo T, Uusi-Makela M, Suo-Palosaari M, Pietila I, Hiltunen AE, Ruddock L, Alanen H, Biterova E, Miinalainen I, Salminen A, Soininen R, Manninen A, Sormunen R, Kaakinen M, Vuolteenaho R, Herva R, Vieira P, Dunder T, Kokkonen H, Moilanen JS, Rantala H, Nogee LM, Majewski J, Ramet M, Hallman M, Hinttala R", "reference": { "type": "PubMed", "id": "29423877", "url": "https://pubmed.ncbi.nlm.nih.gov/29423877" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8NBF2-1", "protein_name": "NHL repeat-containing protein 2", "gene_name": "NHLRC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8BZW8-1", "protein_name": "NHL repeat-containing protein 2", "gene_name": "Nhlrc2", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8NBF2", "url": "https://www.uniprot.org/uniprotkb/Q8NBF2" } ], 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communications", "date": "2006", "authors": "van de Weyer PS, Muehlfeit M, Klose C, Bonventre JV, Walz G, Kuehn EW", "reference": { "type": "PubMed", "id": "17069754", "url": "https://pubmed.ncbi.nlm.nih.gov/17069754" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8TDQ0-1", "protein_name": "Hepatitis A virus cellular receptor 2", "gene_name": "HAVCR2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8TDQ0", "url": "https://www.uniprot.org/uniprotkb/Q8TDQ0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 265, "end_pos": 265, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK", "evidence": [ { "database": "UniProtKB", "id": "Q8TDQ0", "url": "https://www.uniprot.org/uniprotkb/Q8TDQ0" }, { "database": "iPTMnet", "id": "Q8TDQ0", 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Exp. Med.", "date": "2008", "authors": "Jones R Brad, Ndhlovu Lishomwa C, Barbour Jason D, Sheth Prameet M, Jha Aashish R, Long Brian R, Wong Jessica C, Satkunarajah Malathy, Schweneker Marc, Chapman Joan M, Gyenes Gabor, Vali Bahareh, Hyrcza Martin D, Yue Feng Yun, Kovacs Colin, Sassi Aref, Loutfy Mona, Halpenny Roberta, Persad Desmond, Spotts Gerald, Hecht Frederick M, Chun Tae-Wook, McCune Joseph M, Kaul Rupert, Rini James M, Nixon Douglas F, Ostrowski Mario A", "reference": { "type": "PubMed", "id": "19001139", "url": "https://pubmed.ncbi.nlm.nih.gov/19001139" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8TDQ0-1", "protein_name": "Hepatitis A virus cellular receptor 2", "gene_name": "HAVCR2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8TDQ0", "url": "https://www.uniprot.org/uniprotkb/Q8TDQ0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19001139", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Negative immune regulator Tim-3 is overexpressed on T cells in hepatitis C virus infection and its blockade rescues dysfunctional CD4+ and CD8+ T cells.", "journal": "J. Virol.", "date": "2009", "authors": "Golden-Mason Lucy, Palmer Brent E, Kassam Nasim, Townshend-Bulson Lisa, Livingston Stephen, McMahon Brian J, Castelblanco Nicole, Kuchroo Vijay, Gretch David R, Rosen Hugo R", "reference": { "type": "PubMed", "id": "19587053", "url": "https://pubmed.ncbi.nlm.nih.gov/19587053" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8TDQ0-1", "protein_name": "Hepatitis A virus cellular receptor 2", "gene_name": "HAVCR2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8TDQ0", "url": "https://www.uniprot.org/uniprotkb/Q8TDQ0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19587053", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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[] } ] }, { "title": "TIM-3 does not act as a receptor for galectin-9.", "journal": "PLoS pathogens", "date": "2013-03", "authors": "Leitner Judith, Rieger Armin, Pickl Winfried F, Zlabinger Gerhard, Grabmeier-Pfistershammer Katharina, Steinberger Peter", "reference": { "type": "PubMed", "id": "23555261", "url": "https://pubmed.ncbi.nlm.nih.gov/23555261" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8TDQ0-1", "protein_name": "Hepatitis A virus cellular receptor 2", "gene_name": "HAVCR2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8TDQ0", "url": "https://www.uniprot.org/uniprotkb/Q8TDQ0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23555261", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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"title": "T cell Ig and mucin domain-containing protein 3 is recruited to the immune synapse, disrupts stable synapse formation, and associates with receptor phosphatases.", "journal": "Journal of immunology (Baltimore, Md. : 1950)", "date": "2014", "authors": "Clayton KL, Haaland MS, Douglas-Vail MB, Mujib S, Chew GM, Ndhlovu LC, Ostrowski MA", "reference": { "type": "PubMed", "id": "24337741", "url": "https://pubmed.ncbi.nlm.nih.gov/24337741" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8TDQ0-1", "protein_name": "Hepatitis A virus cellular receptor 2", "gene_name": "HAVCR2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8TDQ0", "url": "https://www.uniprot.org/uniprotkb/Q8TDQ0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.24337741", "abstract": "", "glycosylation": [], "mutagenesis": [], 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Regulation of T cell responses by the receptor molecule Tim-3.", "journal": "Immunologic research", "date": "2014-08", "authors": "Gorman Jacob V, Colgan John D", "reference": { "type": "PubMed", "id": "24825777", "url": "https://pubmed.ncbi.nlm.nih.gov/24825777" }, "referenced_glycans": [], 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Verona R, Sabins N, Kaplan F, Santulli-Marotto S, Chin CN, Mooney J, Lingham RB, Naso M, McCabe T", "reference": { "type": "PubMed", "id": "26492563", "url": "https://pubmed.ncbi.nlm.nih.gov/26492563" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8TDQ0-1", "protein_name": "Hepatitis A virus cellular receptor 2", "gene_name": "HAVCR2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8TDQ0", "url": "https://www.uniprot.org/uniprotkb/Q8TDQ0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 265, "end_pos": 265, "sequence_org": "Y", "sequence_mut": "A", "comment": "Abolishes TCR-induced NFAT activation; when associated with A-272.", "evidence": [ { "database": "UniProtKB", "id": "Q8TDQ0", "url": "https://www.uniprot.org/uniprotkb/Q8TDQ0" }, { "database": "PubMed", "id": "26492563", "url": 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Germline HAVCR2 mutations altering TIM-3 characterize subcutaneous panniculitis-like T cell lymphomas with hemophagocytic lymphohistiocytic syndrome.", "journal": "Nature genetics", "date": "2018", "authors": "Gayden T, Sepulveda FE, Khuong-Quang DA, Pratt J, Valera ET, Garrigue A, Kelso S, Sicheri F, Mikael LG, Hamel N, Bajic A, Dali R, Deshmukh S, Dervovic D, Schramek D, Guerin F, Taipale M, Nikbakht H, Majewski J, Moshous D, Charlebois J, Abish S, Bole-Feysot C, Nitschke P, Bader-Meunier B, Mitchell D, Thieblemont C, Battistella M, Gravel S, Nguyen VH, Conyers R, Diana JS, McCormack C, Prince HM, Besnard M, Blanche S, Ekert PG, Fraitag S, Foulkes WD, Fischer A, Neven B, Michonneau D, de Saint Basile G, Jabado N", "reference": { "type": "PubMed", "id": "30374066", "url": "https://pubmed.ncbi.nlm.nih.gov/30374066" }, "referenced_glycans": [], 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "PLK1 and its substrate MISP facilitate intrahepatic cholangiocarcinoma progression by promoting lymphatic invasion and impairing E-cadherin adherens junctions.", "journal": "Cancer gene therapy", "date": "2024-02", "authors": "Pan Yi-Ru, Lai Joseph Chieh-Yu, Huang Wen-Kuan, Peng Pei-Hua, Jung Shih-Ming, Lin Sheng-Hsuan, Chen Chiao-Ping, Wu Chiao-En, Hung Tsai-Hsien, Yu Alice L, Wu Kou-Juey, Yeh Chun-Nan", "reference": { "type": "PubMed", "id": "38057358", "url": "https://pubmed.ncbi.nlm.nih.gov/38057358" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IVT2-1", "protein_name": "Mitotic interactor and substrate of PLK1", "gene_name": "MISP", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IVT2", "url": "https://www.uniprot.org/uniprotkb/Q8IVT2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": 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[] } ] }, { "title": "MISP Is Overexpressed in Intestinal Metaplasia and Gastric Cancer.", "journal": "Current oncology (Toronto, Ont.)", "date": "2024-05-14", "authors": "Vilarinho Tom\u00e1s, P\u00e1dua Diana, Pereira Bruno, Mesquita Patr\u00edcia, Almeida Raquel", "reference": { "type": "PubMed", "id": "38785491", "url": "https://pubmed.ncbi.nlm.nih.gov/38785491" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IVT2-1", "protein_name": "Mitotic interactor and substrate of PLK1", "gene_name": "MISP", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IVT2", "url": "https://www.uniprot.org/uniprotkb/Q8IVT2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38785491", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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NMR", "date": "2004", "authors": "Zimmermann J, Jarchau T, Walter U, Oschkinat H, Ball LJ", "reference": { "type": "PubMed", "id": "15213456", "url": "https://pubmed.ncbi.nlm.nih.gov/15213456" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7Z698-1", "protein_name": "Sprouty-related, EVH1 domain-containing protein 2", "gene_name": "SPRED2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7Z698", "url": "https://www.uniprot.org/uniprotkb/Q7Z698" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15213456", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Spred-2 steady-state levels are regulated by phosphorylation and Cbl-mediated ubiquitination.", "journal": "Biochemical and biophysical research communications", "date": "2006", "authors": "Lock P, I ST, Straffon AF, Schieb H, Hovens CM, Stylli SS", "reference": { "type": "PubMed", "id": "17094949", "url": "https://pubmed.ncbi.nlm.nih.gov/17094949" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7Z698-1", "protein_name": "Sprouty-related, EVH1 domain-containing protein 2", "gene_name": "SPRED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z699-1", "protein_name": "Sprouty-related, EVH1 domain-containing protein 1", "gene_name": "SPRED1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2MJR0-1", "protein_name": "Sprouty-related, EVH1 domain-containing protein 3", "gene_name": "SPRED3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22681-1", "protein_name": "E3 ubiquitin-protein ligase CBL", "gene_name": "CBL", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7Z698", "url": "https://www.uniprot.org/uniprotkb/Q7Z698" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 228, "end_pos": 228, "sequence_org": "Y", "sequence_mut": "F", "comment": "Reduces ubiquitination and CBL-induced phosphorylation; 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Immunol.", "date": "2014", "authors": "R\u00f6dstr\u00f6m Karin E J, Elbing Karin, Lindkvist-Petersson Karin", "reference": { "type": "PubMed", "id": "25015819", "url": "https://pubmed.ncbi.nlm.nih.gov/25015819" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A075B6N1-1", "protein_name": "T cell receptor beta variable 19", "gene_name": "TRBV19", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A5B9-1", "protein_name": "T cell receptor beta constant 2", "gene_name": "TRBC2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "A0A075B6N1", "url": "https://www.uniprot.org/uniprotkb/A0A075B6N1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25015819", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Benjamin, Begley Tadhg P, de Cr\u00e9cy-Lagard Val\u00e9rie, Hanson Andrew D", "reference": { "type": "PubMed", "id": "21538139", "url": "https://pubmed.ncbi.nlm.nih.gov/21538139" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SRE0-1", "protein_name": "5-formyltetrahydrofolate cyclo-ligase-like protein COG0212", "gene_name": "COG0212", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SRE0", "url": "https://www.uniprot.org/uniprotkb/Q9SRE0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.21538139", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Developmental and stimulus-induced expression patterns of Arabidopsis calmodulin-like genes CML37, CML38 and CML39.", "journal": "Plant molecular biology", "date": "2007-08", "authors": "Vanderbeld Barbara, Snedden Wayne A", "reference": { "type": "PubMed", "id": "17579812", "url": "https://pubmed.ncbi.nlm.nih.gov/17579812" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SRE7-1", "protein_name": "Calcium-binding protein CML39", "gene_name": "CML39", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIH9-1", "protein_name": "Calcium-binding protein CML37", "gene_name": "CML37", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRE6-1", "protein_name": "Calcium-binding protein CML38", "gene_name": "CML38", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SRE7", "url": "https://www.uniprot.org/uniprotkb/Q9SRE7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17579812", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", 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"total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis formin AtFH6 is a plasma membrane-associated protein upregulated in giant cells induced by parasitic nematodes.", "journal": "Plant Cell", "date": "2004", "authors": "Favery Bruno, Chelysheva Liudmila A, Lebris Manuel, Jammes Fabien, Marmagne Anne, De Almeida-Engler Janice, Lecomte Philippe, Vaury Chantal, Arkowitz Robert A, Abad Pierre", "reference": { "type": "PubMed", "id": "15319477", "url": "https://pubmed.ncbi.nlm.nih.gov/15319477" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SRR2-1", "protein_name": "Formin-like protein 10", "gene_name": "FH10", "tax_name": 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journal : for cell and molecular biology", "date": "2007-09", "authors": "Kliebenstein Daniel J, D'Auria John C, Behere Aditi S, Kim Jae Hak, Gunderson Kevin L, Breen John N, Lee Grace, Gershenzon Jonathan, Last Robert L, Jander Georg", "reference": { "type": "PubMed", "id": "17651367", "url": "https://pubmed.ncbi.nlm.nih.gov/17651367" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SS01-1", "protein_name": "Benzoate--CoA ligase, peroxisomal", "gene_name": "AAE20", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SS01", "url": "https://www.uniprot.org/uniprotkb/Q9SS01" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17651367", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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