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Kumagai Satoshi, Muto Hideki, Sato Atsuko, Watahiki Masaaki K, Harper Rene\u00e9 M, Liscum Emmanuel, Yamamoto Kotaro T", "reference": { "type": "PubMed", "id": "14729917", "url": "https://pubmed.ncbi.nlm.nih.gov/14729917" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O24409-1", "protein_name": "Auxin-responsive protein IAA19", "gene_name": "IAA19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P93022-1", "protein_name": "Auxin response factor 7", "gene_name": "ARF7; NPH4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O24409", "url": "https://www.uniprot.org/uniprotkb/O24409" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.14729917", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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"The CLAVATA1-related BAM1, BAM2 and BAM3 receptor kinase-like proteins are required for meristem function in Arabidopsis.", "journal": "The Plant journal : for cell and molecular biology", "date": "2006-01", "authors": "DeYoung Brody J, Bickle Kristen L, Schrage Katherine J, Muskett Paul, Patel Kanu, Clark Steven E", "reference": { "type": "PubMed", "id": "16367950", "url": "https://pubmed.ncbi.nlm.nih.gov/16367950" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O49545-1", "protein_name": "Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1", "gene_name": "BAM1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65440-1", "protein_name": "Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3", "gene_name": "BAM3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2Z1-1", "protein_name": "Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2", "gene_name": "BAM2", "tax_name": 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The BAM1/BAM2 receptor-like kinases are important regulators of Arabidopsis early anther development.", "journal": "The Plant cell", "date": "2006-07", "authors": "Hord Carey L H, Chen Changbin, Deyoung Brody J, Clark Steven E, Ma Hong", "reference": { "type": "PubMed", "id": "16751349", "url": "https://pubmed.ncbi.nlm.nih.gov/16751349" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O49545-1", "protein_name": "Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1", "gene_name": "BAM1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2Z1-1", "protein_name": "Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2", "gene_name": "BAM2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": 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[] } ] }, { "title": "A conserved upstream open reading frame mediates sucrose-induced repression of translation.", "journal": "Plant Cell", "date": "2004", "authors": "Wiese Anika, Elzinga Nico, Wobbes Barry, Smeekens Sjef", "reference": { "type": "PubMed", "id": "15208401", "url": "https://pubmed.ncbi.nlm.nih.gov/15208401" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O65683-1", "protein_name": "bZIP transcription factor 11", "gene_name": "BZIP11", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O65683", "url": "https://www.uniprot.org/uniprotkb/O65683" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15208401", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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around the plastocyanin gene reveals an MAR-specific sequence element in Arabidopsis thaliana.", "journal": "Nucleic Acids Res.", "date": "1997", "authors": "van Drunen C M, Oosterling R W, Keultjes G M, Weisbeek P J, van Driel R, Smeekens S C", "reference": { "type": "PubMed", "id": "9380515", "url": "https://pubmed.ncbi.nlm.nih.gov/9380515" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O65683-1", "protein_name": "bZIP transcription factor 11", "gene_name": "BZIP11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P11490-1", "protein_name": "Plastocyanin minor isoform, chloroplastic", "gene_name": "PETE1; PETE", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P48731-1", "protein_name": "Homeobox protein ATH1", "gene_name": "ATH1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O65683", "url": 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transcription factor gene ATB2 encodes a protein with an unusually long leucine zipper domain.", "journal": "Plant Mol. Biol.", "date": "1998", "authors": "Rook F, Weisbeek P, Smeekens S", "reference": { "type": "PubMed", "id": "9620274", "url": "https://pubmed.ncbi.nlm.nih.gov/9620274" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O65683-1", "protein_name": "bZIP transcription factor 11", "gene_name": "BZIP11", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O65683", "url": "https://www.uniprot.org/uniprotkb/O65683" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.9620274", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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Cheol, Moon Byeong Cheol, Lee Ju Huck, Yoon Hae Won, Lee Sung-Ho, Chung Woo Sik, Lim Chae Oh, Lee Sang Yeol, Hong Jong Chan, Cho Moo Je", "reference": { "type": "PubMed", "id": "15310827", "url": "https://pubmed.ncbi.nlm.nih.gov/15310827" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O80450-1", "protein_name": "Trihelix transcription factor GT-3b", "gene_name": "GT-3B", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O80450", "url": "https://www.uniprot.org/uniprotkb/O80450" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15310827", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Maize rough sheath2 and its Arabidopsis orthologue ASYMMETRIC LEAVES1 interact with HIRA, a predicted histone chaperone, to maintain knox gene silencing and determinacy during organogenesis.", "journal": "Plant Cell", "date": "2005", "authors": "Phelps-Durr Tara L, Thomas Julie, Vahab Phil, Timmermans Marja C P", "reference": { "type": "PubMed", "id": "16243907", "url": "https://pubmed.ncbi.nlm.nih.gov/16243907" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O80931-1", "protein_name": "Transcription factor AS1", "gene_name": "AS1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LIA4-1", "protein_name": "Protein RIK", "gene_name": "RIK", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXN4-1", "protein_name": "Protein HIRA", "gene_name": "HIRA", "tax_name": "Mouse-ear cress" } ], 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molecular biology", "date": "2009-12", "authors": "Yin Ping, Fan He, Hao Qi, Yuan Xiaoqiu, Wu Di, Pang Yuxuan, Yan Chuangye, Li Wenqi, Wang Jiawei, Yan Nieng", "reference": { "type": "PubMed", "id": "19893533", "url": "https://pubmed.ncbi.nlm.nih.gov/19893533" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O80992-1", "protein_name": "Abscisic acid receptor PYL2", "gene_name": "PYL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZS8-1", "protein_name": "Abscisic acid receptor PYL1", "gene_name": "PYL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P49597-1", "protein_name": "Protein phosphatase 2C 56", "gene_name": "ABI1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O80992", "url": "https://www.uniprot.org/uniprotkb/O80992" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 64, "end_pos": 64, "sequence_org": "K", "sequence_mut": "A", "comment": "Impaired ABA-mediated binding to PP2Cs and subsequent inhibition.", "evidence": [ { "database": "UniProtKB", "id": "O80992", "url": "https://www.uniprot.org/uniprotkb/O80992" }, { "database": "PubMed", "id": "19898420", "url": "https://pubmed.ncbi.nlm.nih.gov/19898420" }, { "database": "PubMed", "id": "19893533", "url": "https://pubmed.ncbi.nlm.nih.gov/19893533" } ], "uniprot_canonical_ac": "O80992-1" } ], "record_id": "pubmed.19893533", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "A role for caleosin in degradation of oil-body storage lipid during seed germination.", "journal": "The Plant journal : for cell and molecular biology", "date": "2006-09", "authors": "Poxleitner Marianne, Rogers Sally W, Lacey Samuels A, Browse John, Rogers John C", "reference": { "type": "PubMed", "id": "16961733", "url": "https://pubmed.ncbi.nlm.nih.gov/16961733" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O81270-1", "protein_name": "Peroxygenase 1", "gene_name": "PXG1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O81270", "url": "https://www.uniprot.org/uniprotkb/O81270" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16961733", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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NOZZLE physically interacts with members of the YABBY family.", "journal": "Plant Physiol.", "date": "2004", "authors": "Sieber Patrick, Petrascheck Michael, Barberis Alcide, Schneitz Kay", "reference": { "type": "PubMed", "id": "15299139", "url": "https://pubmed.ncbi.nlm.nih.gov/15299139" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O81836-1", "protein_name": "Protein SPOROCYTELESS", "gene_name": "SPL", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LDT3-1", "protein_name": "Axial regulator YABBY 4", "gene_name": "INO; YAB4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XFB1-1", "protein_name": "Axial regulator YABBY 3", "gene_name": "YAB3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22152-1", "protein_name": "Axial regulator YABBY 1", "gene_name": "AFO; YAB1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", 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SPOROCYTELESS/NOZZLE gene is involved in controlling stamen identity in Arabidopsis.", "journal": "Plant physiology", "date": "2009-11", "authors": "Liu Xiaodong, Huang Jian, Parameswaran Sriram, Ito Toshiro, Seubert Brandon, Auer Max, Rymaszewski Amy, Jia Gengxiang, Owen Heather A, Zhao Dazhong", "reference": { "type": "PubMed", "id": "19726570", "url": "https://pubmed.ncbi.nlm.nih.gov/19726570" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O81836-1", "protein_name": "Protein SPOROCYTELESS", "gene_name": "SPL", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O81836", "url": "https://www.uniprot.org/uniprotkb/O81836" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19726570", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": 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Caroline, Fobert Pierre R, Zachgo Sabine, Hepworth Shelley R", "reference": { "type": "PubMed", "id": "20805327", "url": "https://pubmed.ncbi.nlm.nih.gov/20805327" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O81836-1", "protein_name": "Protein SPOROCYTELESS", "gene_name": "SPL", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LF89-1", "protein_name": "Glutaredoxin-C8", "gene_name": "GRXC8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93XM6-1", "protein_name": "Transcription factor TGA9", "gene_name": "TGA9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96305-1", "protein_name": "Glutaredoxin-C7", "gene_name": "GRXC7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "E3VNM4-1", "protein_name": "Transcription factor TGA10", "gene_name": "TGA10", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis SET DOMAIN GROUP2 is required for H3K4 trimethylation and is crucial for both sporophyte and gametophyte development.", "journal": "Plant Cell", "date": "2010", "authors": "Berr Alexandre, McCallum Emily J, M\u00e9nard Rozenn, Meyer Denise, Fuchs J\u00f6rg, Dong Aiwu, Shen Wen-Hui", "reference": { "type": "PubMed", "id": "21037105", "url": "https://pubmed.ncbi.nlm.nih.gov/21037105" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O81836-1", "protein_name": "Protein SPOROCYTELESS", "gene_name": "SPL", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23372-1", "protein_name": "Histone-lysine N-methyltransferase ATXR3", "gene_name": "ATXR3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMS5-1", "protein_name": "PHD finger protein MALE STERILITY 1", "gene_name": "MS1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O81836", "url": "https://www.uniprot.org/uniprotkb/O81836" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.21037105", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", 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morphology of shoot lateral organs via negative regulation of the expression of boundary-specific genes in Arabidopsis.", "journal": "The Plant cell", "date": "2007-02", "authors": "Koyama Tomotsugu, Furutani Masahiko, Tasaka Masao, Ohme-Takagi Masaru", "reference": { "type": "PubMed", "id": "17307931", "url": "https://pubmed.ncbi.nlm.nih.gov/17307931" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O82277-1", "protein_name": "Transcription factor TCP10", "gene_name": "TCP10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LPR5-1", "protein_name": "Transcription factor TCP4", "gene_name": "TCP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C758-1", "protein_name": "Transcription factor TCP24", "gene_name": "TCP24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FME3-1", "protein_name": "Transcription factor TCP5", "gene_name": "TCP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MAH8-1", 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Biol. Chem.", "date": "2003", "authors": "Boisson Bertrand, Giglione Carmela, Meinnel Thierry", "reference": { "type": "PubMed", "id": "12912986", "url": "https://pubmed.ncbi.nlm.nih.gov/12912986" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P18064-1", "protein_name": "Guanine nucleotide-binding protein alpha-1 subunit", "gene_name": "GPA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W4L3-1", "protein_name": "Serine/threonine-protein kinase BSK3", "gene_name": "BSK3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q944A7-1", "protein_name": "Serine/threonine-protein kinase BSK1", "gene_name": "BSK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O24454-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 3", "gene_name": "UBP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIL1-1", "protein_name": "Serine/threonine-protein kinase BSK5", "gene_name": "BSK5", "tax_name": "Mouse-ear cress" 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"gene_name": "CPK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HU55-1", "protein_name": "Serine/threonine-protein kinase BSK4", "gene_name": "BSK4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I7Y4-1", "protein_name": "Serine/threonine-protein kinase BSK11", "gene_name": "BSK11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTR9-1", "protein_name": "Glycylpeptide N-tetradecanoyltransferase 1", "gene_name": "NMT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M324-1", "protein_name": "Serine/threonine-protein kinase BSK6", "gene_name": "BSK6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MB58-1", "protein_name": "6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase", "gene_name": "FKFBP", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P18064", "url": "https://www.uniprot.org/uniprotkb/P18064" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12912986", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 17 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": 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[] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A seven-transmembrane RGS protein that modulates plant cell proliferation.", "journal": "Science", "date": "2003", "authors": "Chen Jin-Gui, Willard Francis S, Huang Jirong, Liang Jiansheng, Chasse Scott A, Jones Alan M, Siderovski David P", "reference": { "type": "PubMed", "id": "14500984", "url": "https://pubmed.ncbi.nlm.nih.gov/14500984" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P18064-1", "protein_name": "Guanine nucleotide-binding protein alpha-1 subunit", "gene_name": "GPA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H1F2-1", "protein_name": "Regulator of G protein signaling 1", "gene_name": "RGS1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P18064", "url": "https://www.uniprot.org/uniprotkb/P18064" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.14500984", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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Biol. 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Cell Sci.", "date": "2006", "authors": "Adjobo-Hermans Merel J W, Goedhart Joachim, Gadella Theodorus W J", "reference": { "type": "PubMed", "id": "17158913", "url": "https://pubmed.ncbi.nlm.nih.gov/17158913" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P18064-1", "protein_name": "Guanine nucleotide-binding protein alpha-1 subunit", "gene_name": "GPA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P49177-1", "protein_name": "Guanine nucleotide-binding protein subunit beta", "gene_name": "AGB1; GB1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93V47-1", "protein_name": "Guanine nucleotide-binding protein subunit gamma 2", "gene_name": "GG2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FDX9-1", "protein_name": "Guanine nucleotide-binding protein subunit gamma 1", "gene_name": "GG1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { 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U.S.A.", "date": "2007", "authors": "Johnston Christopher A, Taylor J Philip, Gao Yajun, Kimple Adam J, Grigston Jeffrey C, Chen Jin-Gui, Siderovski David P, Jones Alan M, Willard Francis S", "reference": { "type": "PubMed", "id": "17951432", "url": "https://pubmed.ncbi.nlm.nih.gov/17951432" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P18064-1", "protein_name": "Guanine nucleotide-binding protein alpha-1 subunit", "gene_name": "GPA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H1F2-1", "protein_name": "Regulator of G protein signaling 1", "gene_name": "RGS1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P18064", "url": "https://www.uniprot.org/uniprotkb/P18064" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 320, "end_pos": 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Two novel GPCR-type G proteins are abscisic acid receptors in Arabidopsis.", "journal": "Cell", "date": "2009", "authors": "Pandey S, Nelson DC, Assmann SM", "reference": { "type": "PubMed", "id": "19135895", "url": "https://pubmed.ncbi.nlm.nih.gov/19135895" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P18064-1", "protein_name": "Guanine nucleotide-binding protein alpha-1 subunit", "gene_name": "GPA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0CG08-1", "protein_name": "Golgi pH regulator B", "gene_name": "GPHRB; GPR89B", "tax_name": "Human" }, { "uniprot_canonical_ac": "B7ZAQ6-1", "protein_name": "Golgi pH regulator A", "gene_name": "GPHRA; GPR89A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0WQG8-1", "protein_name": "GPCR-type G protein 2", "gene_name": "GTG2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XIP7-1", "protein_name": "GPCR-type G protein 1", "gene_name": "GTG1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P18064", "url": "https://www.uniprot.org/uniprotkb/P18064" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19135895", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]