[ { "title": "A common mechanism for mitotic inactivation of C2H2 zinc finger DNA-binding domains.", "journal": "Genes & development", "date": "2002", "authors": "Dovat S, Ronni T, Russell D, Ferrini R, Cobb BS, Smale ST", "reference": { "type": "PubMed", "id": "12464629", "url": "https://pubmed.ncbi.nlm.nih.gov/12464629" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03267-1", "protein_name": "DNA-binding protein Ikaros", "gene_name": "Ikzf1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 140, "end_pos": 140, "sequence_org": "T", "sequence_mut": "A", "comment": "Abolishes phosphorylation, DNA binding and pericentromeric location. Loss of DNA binding and pericentromeric location; when associated with A-167 and A-195.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "12464629", "url": "https://pubmed.ncbi.nlm.nih.gov/12464629" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 140, "end_pos": 140, "sequence_org": "T", "sequence_mut": "E", "comment": "Abolishes phosphorylation, DNA binding and pericentromeric location. Loss of DNA binding and pericentromeric location; when associated with E-167 and D-195.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "12464629", "url": "https://pubmed.ncbi.nlm.nih.gov/12464629" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 167, "end_pos": 167, "sequence_org": "S", "sequence_mut": "A", "comment": "Abolishes phosphorylation, no effect on DNA binding nor on pericentromeric location. Loss of DNA binding and pericentromeric location; when associated with A-140 and A-195.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "12464629", "url": "https://pubmed.ncbi.nlm.nih.gov/12464629" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 167, "end_pos": 167, "sequence_org": "S", "sequence_mut": "E", "comment": "Abolishes phosphorylation, no effect on DNA binding nor on pericentromeric location. Loss of DNA binding and pericentromeric location; when associated with E-140 and D-195.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "12464629", "url": "https://pubmed.ncbi.nlm.nih.gov/12464629" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 195, "end_pos": 195, "sequence_org": "S", "sequence_mut": "A", "comment": "Abolishes phosphorylation, no effect on DNA binding nor on pericentromeric location. Loss of DNA binding and pericentromeric location; when associated with A-140 and A-167.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "12464629", "url": "https://pubmed.ncbi.nlm.nih.gov/12464629" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 195, "end_pos": 195, "sequence_org": "S", "sequence_mut": "D", "comment": "Abolishes phosphorylation, no effect on DNA binding nor on pericentromeric location. Loss of DNA binding and pericentromeric location; when associated with E-140 and E-167.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "12464629", "url": "https://pubmed.ncbi.nlm.nih.gov/12464629" } ], "uniprot_canonical_ac": "Q03267-1" } ], "phosphorylation": [ { "start_pos": 140, "end_pos": 140, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "Phosphothreonine", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "12464629", "url": "https://pubmed.ncbi.nlm.nih.gov/12464629" }, { "database": "iPTMnet", "id": "Q03267", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q03267" } ], "site_lbl": "Thr140", "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 167, "end_pos": 167, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "12464629", "url": "https://pubmed.ncbi.nlm.nih.gov/12464629" }, { "database": "iPTMnet", "id": "Q03267", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q03267" } ], "site_lbl": "Ser167", "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 195, "end_pos": 195, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "12464629", "url": "https://pubmed.ncbi.nlm.nih.gov/12464629" }, { "database": "iPTMnet", "id": "Q03267", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q03267" } ], "site_lbl": "Ser195", "uniprot_canonical_ac": "Q03267-1" } ], "record_id": "pubmed.12464629", "abstract": "", "glycosylation": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", 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}, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ikaros, an early lymphoid-specific transcription factor and a putative mediator for T cell commitment.", "journal": "Science (New York, N.Y.)", "date": "1992", "authors": "Georgopoulos K, Moore DD, Derfler B", "reference": { "type": "PubMed", "id": "1439790", "url": "https://pubmed.ncbi.nlm.nih.gov/1439790" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03267-1", "protein_name": "DNA-binding protein Ikaros", "gene_name": "Ikzf1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.1439790", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Phosphorylation controls Ikaros's ability to negatively regulate the G(1)-S transition.", "journal": "Molecular and cellular biology", "date": "2004", "authors": "Gomez-del Arco P, Maki K, Georgopoulos K", "reference": { "type": "PubMed", "id": "15024069", "url": "https://pubmed.ncbi.nlm.nih.gov/15024069" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03267-1", "protein_name": "DNA-binding protein Ikaros", "gene_name": "Ikzf1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 384, "end_pos": 384, "sequence_org": "S", "sequence_mut": "A", "comment": "Significantly reduced phosphorylation and 2- to 3-fold increase in ability to arrest in G(1); when associated with A-386; A-388; A-392 and A-393. and A-392. Further reduction in phosphorylation; when associated with A-63; A-386; A-388; A-392 and A-393.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "15024069", "url": "https://pubmed.ncbi.nlm.nih.gov/15024069" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 386, "end_pos": 386, "sequence_org": "S", "sequence_mut": "A", "comment": "Significantly reduced phosphorylation and 2- to 3-fold increase in ability to arrest in G(1); when associated with A-384; A-388; A-392 and A-393. Further reduction in phosphorylation; when associated with A-63; A-384; A-388; A-392 and A-393.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "15024069", "url": "https://pubmed.ncbi.nlm.nih.gov/15024069" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 388, "end_pos": 388, "sequence_org": "S", "sequence_mut": "A", "comment": "Significantly reduced phosphorylation and 2- to 3-fold increase in ability to arrest in G(1); when associated with A-384; A-386; A-392 and A-393. Further reduction in phosphorylation; when associated with A-63; A-384; A-386; A-392 and A-393.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "15024069", "url": "https://pubmed.ncbi.nlm.nih.gov/15024069" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 392, "end_pos": 392, "sequence_org": "S", "sequence_mut": "A", "comment": "Significantly reduced phosphorylation and 2- to 3-fold increase in ability to arrest in G(1); when associated with A-384; A-386; A-388 and A-392. Further reduction in phosphorylation; when associated with A-63; A-384; A-386; A-386 and A-388.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "15024069", "url": "https://pubmed.ncbi.nlm.nih.gov/15024069" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 393, "end_pos": 393, "sequence_org": "T", "sequence_mut": "A", "comment": "Significantly reduced phosphorylation and 2- to 3-fold increase in ability to arrest in G(1); when associated with A-384; A-386; A-388 and A-392. Further reduction in phosphorylation; when associated with A-63; A-384; A-386; A-388 and A-392.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "15024069", "url": "https://pubmed.ncbi.nlm.nih.gov/15024069" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 63, "end_pos": 63, "sequence_org": "S", "sequence_mut": "A", "comment": "No change in pericentromeric location. Greatly reduced phosphorylation; when associated with A-384; A-386; A-388; A392 and A-393. No effect on DNA-binding activity. Increased DNA-binding activity; when associated with A-384; A-386; A-388; A-392 and A-393.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "15024069", "url": "https://pubmed.ncbi.nlm.nih.gov/15024069" }, { "database": "PubMed", "id": "18223295", "url": "https://pubmed.ncbi.nlm.nih.gov/18223295" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 63, "end_pos": 63, "sequence_org": "S", "sequence_mut": "D", "comment": "No change in binding to gamma satellites A and B. No change in pericentromeric location.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "15024069", "url": "https://pubmed.ncbi.nlm.nih.gov/15024069" }, { "database": "PubMed", "id": "18223295", "url": "https://pubmed.ncbi.nlm.nih.gov/18223295" } ], "uniprot_canonical_ac": "Q03267-1" } ], "phosphorylation": [ { "start_pos": 384, "end_pos": 384, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "15024069", "url": "https://pubmed.ncbi.nlm.nih.gov/15024069" }, { "database": "iPTMnet", "id": "Q03267", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q03267" } ], "site_lbl": "Ser384", "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 386, "end_pos": 386, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "15024069", "url": "https://pubmed.ncbi.nlm.nih.gov/15024069" }, { "database": "iPTMnet", "id": "Q03267", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q03267" } ], "site_lbl": "Ser386", "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 388, "end_pos": 388, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "15024069", "url": "https://pubmed.ncbi.nlm.nih.gov/15024069" }, { "database": "iPTMnet", "id": "Q03267", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q03267" } ], "site_lbl": "Ser388", "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 392, "end_pos": 392, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "15024069", "url": "https://pubmed.ncbi.nlm.nih.gov/15024069" }, { "database": "iPTMnet", "id": "Q03267", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q03267" } ], "site_lbl": "Ser392", "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 393, "end_pos": 393, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "Phosphothreonine", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "15024069", "url": "https://pubmed.ncbi.nlm.nih.gov/15024069" }, { "database": "iPTMnet", "id": "Q03267", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q03267" } ], "site_lbl": "Thr393", 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"field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ikaros increases normal apoptosis in adult erythroid cells.", "journal": "American journal of hematology", "date": "2006-01", "authors": "Pulte Dianne, Lopez Rocio A, Baker Shane T, Ward Maureen, Ritchie Ellen, Richardson Christine A, O'Neill David W, Bank Arthur", "reference": { "type": "PubMed", "id": "16369973", "url": "https://pubmed.ncbi.nlm.nih.gov/16369973" }, 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"field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Recruitment of ikaros to pericentromeric heterochromatin is regulated by phosphorylation.", "journal": "The Journal of biological chemistry", "date": "2008", "authors": "Gurel Z, Ronni T, Ho S, Kuchar J, Payne KJ, Turk CW, Dovat S", "reference": { "type": "PubMed", "id": "18223295", "url": "https://pubmed.ncbi.nlm.nih.gov/18223295" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03267-1", "protein_name": "DNA-binding protein Ikaros", "gene_name": "Ikzf1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 101, "end_pos": 101, "sequence_org": "S", "sequence_mut": "A", "comment": "Abolishes phosphorylation. No change in pericentromeric location.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "18223295", "url": "https://pubmed.ncbi.nlm.nih.gov/18223295" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 101, "end_pos": 101, "sequence_org": "S", "sequence_mut": "D", "comment": "No change in binding to gamma satellites A and B. No change in pericentromeric location.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "18223295", "url": "https://pubmed.ncbi.nlm.nih.gov/18223295" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 13, "end_pos": 13, "sequence_org": "S", "sequence_mut": "A", "comment": "Abolishes phosphorylation. No change in binding to gamma satellites A and B. No change in pericentromeric location. Increased DNA binding affinity toward TDT.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "18223295", "url": "https://pubmed.ncbi.nlm.nih.gov/18223295" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 13, "end_pos": 13, "sequence_org": "S", "sequence_mut": "D", "comment": "Decreased binding to gamma satellite A by 5-fold and to gamma satellite B by 3-fold. Diffuse nuclear location.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "18223295", "url": "https://pubmed.ncbi.nlm.nih.gov/18223295" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 23, "end_pos": 23, "sequence_org": "T", "sequence_mut": "A", "comment": "Abolishes phosphorylation. No change in binding to gamma satellites A and B. No change in pericentromeric location.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "18223295", "url": "https://pubmed.ncbi.nlm.nih.gov/18223295" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 23, "end_pos": 23, "sequence_org": "T", "sequence_mut": "D", "comment": "Decreased binding to gamma satellites A and B by 3-fold. Little change in pericentromeric location.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "18223295", "url": "https://pubmed.ncbi.nlm.nih.gov/18223295" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 293, "end_pos": 293, "sequence_org": "S", "sequence_mut": "A", "comment": "Abolishes phosphorylation. No change in binding to gamma satellites A and B. No change in pericentromeric location. Increased DNA binding affinity toward TDT.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "18223295", "url": "https://pubmed.ncbi.nlm.nih.gov/18223295" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 293, "end_pos": 293, "sequence_org": "S", "sequence_mut": "D", "comment": "Decreased binding to gamma satellite A by 5-fold and to gamma satellite B by 3-fold. Diffuse nuclear location. Decreased DNA binding affinity toward TdT by 3-fold.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "18223295", "url": "https://pubmed.ncbi.nlm.nih.gov/18223295" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 63, "end_pos": 63, "sequence_org": "S", "sequence_mut": "A", "comment": "No change in pericentromeric location. Greatly reduced phosphorylation; when associated with A-384; A-386; A-388; A392 and A-393. No effect on DNA-binding activity. Increased DNA-binding activity; when associated with A-384; A-386; A-388; A-392 and A-393.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "15024069", "url": "https://pubmed.ncbi.nlm.nih.gov/15024069" }, { "database": "PubMed", "id": "18223295", "url": "https://pubmed.ncbi.nlm.nih.gov/18223295" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 63, "end_pos": 63, "sequence_org": "S", "sequence_mut": "D", "comment": "No change in binding to gamma satellites A and B. 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"field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ikaros confers early temporal competence to mouse retinal progenitor cells.", "journal": "Neuron", "date": "2008", "authors": "Elliott J, Jolicoeur C, Ramamurthy V, Cayouette M", "reference": { "type": "PubMed", "id": "18940586", "url": "https://pubmed.ncbi.nlm.nih.gov/18940586" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03267-1", "protein_name": "DNA-binding protein Ikaros", "gene_name": "Ikzf1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.18940586", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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gene.", "journal": "Mol. Cell. Biol.", "date": "1994", "authors": "Hahm K, Ernst P, Lo K, Kim G S, Turck C, Smale S T", "reference": { "type": "PubMed", "id": "7935426", "url": "https://pubmed.ncbi.nlm.nih.gov/7935426" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03267-1", "protein_name": "DNA-binding protein Ikaros", "gene_name": "Ikzf1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.7935426", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A mutant allele of BARA/LIN-9 rescues the cdk4-/- phenotype by releasing the repression on E2F-regulated genes.", "journal": "Exp. Cell Res.", "date": "2006", "authors": "Sandoval R, Xue J, Tian X, Barrett K, Pilkinton M, Ucker DS, Raychaudhuri P, Kineman RD, Luque RM, Baida G, Zou X, Valli VE, Cook JL, Kiyokawa H, Colamonici OR", "reference": { "type": "PubMed", "id": "16730350", "url": "https://pubmed.ncbi.nlm.nih.gov/16730350" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8C735-1", "protein_name": "Protein lin-9 homolog", "gene_name": "Lin9", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q5TKA1-1", "protein_name": "Protein lin-9 homolog", "gene_name": "LIN9", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8C735", "url": "https://www.uniprot.org/uniprotkb/Q8C735" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.16730350", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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"protein_name": "Protein lin-9 homolog", "gene_name": "Lin9", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9WTJ6-1", "protein_name": "Tesmin", "gene_name": "Tesmin", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8C735", "url": "https://www.uniprot.org/uniprotkb/Q8C735" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.34388164", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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to abnormal hematopoiesis, spinal defects and cataracts.", "journal": "Human molecular genetics", "date": "2004-04-15", "authors": "Oravecz-Wilson Katherine I, Kiel Mark J, Li Lina, Rao Dinesh S, Saint-Dic Djenann, Kumar Priti D, Provot Melissa M, Hankenson Kurt D, Reddy Venkat N, Lieberman Andrew P, Morrison Sean J, Ross Theodora S", "reference": { "type": "PubMed", "id": "14998932", "url": "https://pubmed.ncbi.nlm.nih.gov/14998932" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VD75-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "Hip1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8VD75", "url": "https://www.uniprot.org/uniprotkb/Q8VD75" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.14998932", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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Daniel G, Hermo Louis", "reference": { "type": "PubMed", "id": "16967501", "url": "https://pubmed.ncbi.nlm.nih.gov/16967501" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VD75-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "Hip1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8VD75", "url": "https://www.uniprot.org/uniprotkb/Q8VD75" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.16967501", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } 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Mol. Genet.", "date": "2007", "authors": "Bradley Sarah V, Hyun Teresa S, Oravecz-Wilson Katherine I, Li Lina, Waldorff Erik I, Ermilov Alexander N, Goldstein Steven A, Zhang Claire X, Drubin David G, Varela Kate, Parlow Al, Dlugosz Andrzej A, Ross Theodora S", "reference": { "type": "PubMed", "id": "17452370", "url": "https://pubmed.ncbi.nlm.nih.gov/17452370" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VD75-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "Hip1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JKY5-1", "protein_name": "Huntingtin-interacting protein 1-related protein", "gene_name": "Hip1r", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8VD75", "url": "https://www.uniprot.org/uniprotkb/Q8VD75" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.17452370", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Huntingtin-interacting protein 1 influences worm and mouse presynaptic function and protects Caenorhabditis elegans neurons against mutant polyglutamine toxicity.", "journal": "J. Neurosci.", "date": "2007", "authors": "Parker J Alex, Metzler Martina, Georgiou John, Mage Marilyne, Roder John C, Rose Ann M, Hayden Michael R, N\u00e9ri Christian", "reference": { "type": "PubMed", "id": "17928447", "url": "https://pubmed.ncbi.nlm.nih.gov/17928447" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VD75-1", "protein_name": "Huntingtin-interacting protein 1", "gene_name": "Hip1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8VD75", "url": "https://www.uniprot.org/uniprotkb/Q8VD75" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.17928447", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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[] } ] }, { "title": "Med25 Limits Master Regulators That Govern Adipogenesis.", "journal": "International journal of molecular sciences", "date": "2023-03-24", "authors": "Saunders Jasmine, Sikder Kunal, Phillips Elizabeth, Ishwar Anurag, Mothy David, Margulies Kenneth B, Choi Jason C", "reference": { "type": "PubMed", "id": "37047128", "url": "https://pubmed.ncbi.nlm.nih.gov/37047128" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VCB2-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 25", "gene_name": "Med25", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8VCB2", "url": "https://www.uniprot.org/uniprotkb/Q8VCB2" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.37047128", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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[] } ] }, { "title": "A nonribosomal landscape in the nucleolus revealed by the stem cell protein nucleostemin.", "journal": "Molecular biology of the cell", "date": "2005", "authors": "Politz JC, Polena I, Trask I, Bazett-Jones DP, Pederson T", "reference": { "type": "PubMed", "id": "15857956", "url": "https://pubmed.ncbi.nlm.nih.gov/15857956" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8CI11-1", "protein_name": "Guanine nucleotide-binding protein-like 3", "gene_name": "Gnl3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q811S9-1", "protein_name": "Guanine nucleotide-binding protein-like 3", "gene_name": "Gnl3", "tax_name": "Rat" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8CI11", "url": "https://www.uniprot.org/uniprotkb/Q8CI11" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15857956", "abstract": "", 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Maetens M, Floss T, Wurst W, Bellefroid E, Marine JC", "reference": { "type": "PubMed", "id": "17000755", "url": "https://pubmed.ncbi.nlm.nih.gov/17000755" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8CI11-1", "protein_name": "Guanine nucleotide-binding protein-like 3", "gene_name": "Gnl3", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8CI11", "url": "https://www.uniprot.org/uniprotkb/Q8CI11" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.17000755", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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"GNL3L depletion destabilizes MDM2 and induces p53-dependent G2/M arrest.", "journal": "Oncogene", "date": "2011", "authors": "Meng L, Hsu JK, Tsai RY", "reference": { "type": "PubMed", "id": "21132010", "url": "https://pubmed.ncbi.nlm.nih.gov/21132010" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8CI11-1", "protein_name": "Guanine nucleotide-binding protein-like 3", "gene_name": "Gnl3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NVN8-1", "protein_name": "Guanine nucleotide-binding protein-like 3-like protein", "gene_name": "GNL3L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PGG6-1", "protein_name": "Guanine nucleotide-binding protein-like 3-like protein", "gene_name": "Gnl3l", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8CI11", "url": "https://www.uniprot.org/uniprotkb/Q8CI11" } ], "common_name": "Mouse", "glygen_name": "Mouse", 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"total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Nucleostemin reveals a dichotomous nature of genome maintenance in mammary tumor progression.", "journal": "Oncogene", "date": "2019", "authors": "Lin T, Lin TC, McGrail DJ, Bhupal PK, Ku YH, Zhang W, Meng L, Lin SY, Peng G, Tsai RYL", "reference": { "type": "PubMed", "id": "30692636", "url": "https://pubmed.ncbi.nlm.nih.gov/30692636" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8CI11-1", "protein_name": "Guanine nucleotide-binding protein-like 3", "gene_name": "Gnl3", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8CI11", "url": 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X-chromosome-linked protein that localizes to the acrosome and associates with the ectoplasmic specialization in testes.", "journal": "Biol. 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musculus [10090]" } ], "phosphorylation": [ { "start_pos": 394, "end_pos": 394, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine", "evidence": [ { "database": "UniProtKB", "id": "P19001", "url": "https://www.uniprot.org/uniprotkb/P19001" }, { "database": "PubMed", "id": "21049038", "url": "https://pubmed.ncbi.nlm.nih.gov/21049038" }, { "database": "iPTMnet", "id": "P19001", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19001" } ], "site_lbl": "Tyr394", "uniprot_canonical_ac": "P19001-1" }, { "start_pos": 391, "end_pos": 391, "kinase_uniprot_canonical_ac": "P12931-1", "kinase_gene_name": "SRC", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P08727", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P08727" }, { "database": "PubMed", "id": "21049038", "url": "https://pubmed.ncbi.nlm.nih.gov/21049038" } ], "site_lbl": "Tyr391", "uniprot_canonical_ac": "P08727-1" }, { 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Neurosci.", "date": "2012", "authors": "Zenker Jennifer, Poirot Olivier, de Preux Charles Anne-Sophie, Arnaud Estelle, M\u00e9dard Jean-Jacques, Lacroix Catherine, Kuntzer Thierry, Chrast Roman", "reference": { "type": "PubMed", "id": "22649228", "url": "https://pubmed.ncbi.nlm.nih.gov/22649228" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P63141-1", "protein_name": "Potassium voltage-gated channel subfamily A member 2", "gene_name": "Kcna2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P16389-1", "protein_name": "Potassium voltage-gated channel subfamily A member 2", "gene_name": "KCNA2", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P63141", "url": "https://www.uniprot.org/uniprotkb/P63141" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.22649228", "abstract": "", "glycosylation": [], 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Meis2, a novel mouse Pbx-related homeobox gene induced by retinoic acid during differentiation of P19 embryonal carcinoma cells.", "journal": "Dev. Dyn.", "date": "1997", "authors": "Oulad-Abdelghani M, Chazaud C, Bouillet P, Sapin V, Chambon P, Doll\u00e9 P", "reference": { "type": "PubMed", "id": "9337137", "url": "https://pubmed.ncbi.nlm.nih.gov/9337137" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P97367-1", "protein_name": "Homeobox protein Meis2", "gene_name": "Meis2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P97367", "url": "https://www.uniprot.org/uniprotkb/P97367" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.9337137", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]